| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313903
Identifier: 158313903
GI number: 158313903
Start: 2492354
End: 2492695
Strand: Direct
Name: 158313903
Synonym: Franean1_2068
Alternate gene names: NA
Gene position: 2492354-2492695 (Clockwise)
Preceding gene: 158313902
Following gene: 158313904
Centisome position: 27.75
GC content: 72.51
Gene sequence:
>342_bases GTGGCAGGTGGCAACGCCATCCGGGGGAGCCGGGTCGGGGCAGGGCCGATGGGGGAGGCCGAGCGGGGCGAGACCGCCCC TCGGCAGCGGATTTCCTTCTGGTGCGCCAACGAGCACGAGACGAAACCGGCCTTCGCGGCCGACGCCTCCATCCCGGACA CGTGGGACTGTCCGAGCTGCGGCTTCCCGGCCGGGCGGGACCGTGAGAACACGCCCGCCCCGCCGAAGACGGAGCCGTAC AAGACACACCTCGCCTACGTGCGGGAGCGTCGCAACGAGAAGGACGGCGAGGCGATCCTGGCCGAGGCGCTGGCGAAACT GCGGGGCGCGCCGGCCAACTGA
Upstream 100 bases:
>100_bases GAGGACGTCTACGGTGGCGGTTCGGACGTGGGTGGTCCGGCCGCGGGGGGCCGACCGCCGAGCTACCACCCATGGGACGA GACGAAGGAGCACGCGGGCC
Downstream 100 bases:
>100_bases CCGGCGCACCGCAGGGCACCGGGCCGGCGATGCCGCGCGACGGCGGTTCGTTCGGCCCGGGCCCGGCAGAGATGATCGGC TCCACCGGATCGATCGTCGC
Product: electron transport protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAGGNAIRGSRVGAGPMGEAERGETAPRQRISFWCANEHETKPAFAADASIPDTWDCPSCGFPAGRDRENTPAPPKTEPY KTHLAYVRERRNEKDGEAILAEALAKLRGAPAN
Sequences:
>Translated_113_residues MAGGNAIRGSRVGAGPMGEAERGETAPRQRISFWCANEHETKPAFAADASIPDTWDCPSCGFPAGRDRENTPAPPKTEPY KTHLAYVRERRNEKDGEAILAEALAKLRGAPAN >Mature_112_residues AGGNAIRGSRVGAGPMGEAERGETAPRQRISFWCANEHETKPAFAADASIPDTWDCPSCGFPAGRDRENTPAPPKTEPYK THLAYVRERRNEKDGEAILAEALAKLRGAPAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12163; Mature: 12031
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS00202 RUBREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGNAIRGSRVGAGPMGEAERGETAPRQRISFWCANEHETKPAFAADASIPDTWDCPSC CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GFPAGRDRENTPAPPKTEPYKTHLAYVRERRNEKDGEAILAEALAKLRGAPAN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AGGNAIRGSRVGAGPMGEAERGETAPRQRISFWCANEHETKPAFAADASIPDTWDCPSC CCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GFPAGRDRENTPAPPKTEPYKTHLAYVRERRNEKDGEAILAEALAKLRGAPAN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA