| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yjdJ [C]
Identifier: 158313808
GI number: 158313808
Start: 2370549
End: 2370893
Strand: Direct
Name: yjdJ [C]
Synonym: Franean1_1973
Alternate gene names: 158313808
Gene position: 2370549-2370893 (Clockwise)
Preceding gene: 158313807
Following gene: 158313814
Centisome position: 26.39
GC content: 69.86
Gene sequence:
>345_bases ATGGACGTGACAGTCGTCGACAACCCCCCAGCCGGCCGGTTCGAGGCCAGAACTCCGACCGGGGAGGTCGCGGGGTTCGC CGAGTACACGCGGTCGAGCTCGCGAATCATCTTCACCCACACCGAGGTCGATCCGGCCTACAAGGGCACCGGCGTGGGCT CCGCGTTGGCTGCCGGGGCGCTCGATTCGGCGCGCGCCCAGGGCTTGGCCGTCATCCCCCGGTGCCCGTTCATCAAGGCC TACATAGATCGGCATCCCGCGTACGCGGACCTGGTACGACGGTCCTCCACCTCCTCACCTGCCCACGAGCCGGCACCGGG AGCCGGGCCGACAACGGGGCCCTGA
Upstream 100 bases:
>100_bases CCCGACCCCGACCAGCCGCCGCTGGCGGCCACCCCCCGGCGGCCGGTCGAGGAGATCCTCGACATCGCCTGATCCGTGCG GACCGGCAAGGATGGGCGCC
Downstream 100 bases:
>100_bases CCAGCGCTGAGGGGCTGACCAGCGCTGAGGGGCTGACCAGCACCGGGCGTCGTCGGACCAGCGCCGGGGCCCCGGCGGAC ACCGGGGCCCCGGCTGCCTC
Product: acetyltransferase-like protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MDVTVVDNPPAGRFEARTPTGEVAGFAEYTRSSSRIIFTHTEVDPAYKGTGVGSALAAGALDSARAQGLAVIPRCPFIKA YIDRHPAYADLVRRSSTSSPAHEPAPGAGPTTGP
Sequences:
>Translated_114_residues MDVTVVDNPPAGRFEARTPTGEVAGFAEYTRSSSRIIFTHTEVDPAYKGTGVGSALAAGALDSARAQGLAVIPRCPFIKA YIDRHPAYADLVRRSSTSSPAHEPAPGAGPTTGP >Mature_114_residues MDVTVVDNPPAGRFEARTPTGEVAGFAEYTRSSSRIIFTHTEVDPAYKGTGVGSALAAGALDSARAQGLAVIPRCPFIKA YIDRHPAYADLVRRSSTSSPAHEPAPGAGPTTGP
Specific function: Unknown
COG id: COG2388
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11824; Mature: 11824
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVTVVDNPPAGRFEARTPTGEVAGFAEYTRSSSRIIFTHTEVDPAYKGTGVGSALAAGA CCEEECCCCCCCCEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHCC LDSARAQGLAVIPRCPFIKAYIDRHPAYADLVRRSSTSSPAHEPAPGAGPTTGP CCCCCCCCEEECCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDVTVVDNPPAGRFEARTPTGEVAGFAEYTRSSSRIIFTHTEVDPAYKGTGVGSALAAGA CCEEECCCCCCCCEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHCC LDSARAQGLAVIPRCPFIKAYIDRHPAYADLVRRSSTSSPAHEPAPGAGPTTGP CCCCCCCCEEECCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA