| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313776
Identifier: 158313776
GI number: 158313776
Start: 2330856
End: 2331776
Strand: Direct
Name: 158313776
Synonym: Franean1_1941
Alternate gene names: NA
Gene position: 2330856-2331776 (Clockwise)
Preceding gene: 158313775
Following gene: 158313777
Centisome position: 25.95
GC content: 73.4
Gene sequence:
>921_bases GTGGGACCAGCCGACGCTGTTCTCGTCGCCGGGGCCGGCCTGCTCGCGGGGGCCGTGAACGCCGTGGCGGGCGGCGGCAC CCTGATCGCGTTCCCGGCGCTGCTCGCCACCGGCCTGCCCGCCCTCACCGCCAACATCACCTCCTCGGTCGGGCTCGTCA CCGGGTACGCGGGCGGGGCCCTGGGCTACCGGCGAGAACTAGCCGGACAGACGTCCAGGCTGAAGGCGCTCGGCCCACCG GCGATGCTCGGCGGCCTGGTCGGCGCGGTCGTCCTGCTGCTGACCCCGTCGGACGGCTTCCGGTCCGCCGTGCCGTTCCT GGTGATCGTGGCCTGCCTCCTTCTGGCCGCGCAGTCGAGGCTGGCCTCGCTCGTCGCCCGCCGCCGGGCAGCCGCGCTGG CGACCACCCCCCGGCAGGCGCCCGGCGGCCCGATCGGGGCCGAACCGTCCGTCAGGGCCGAACCGTCCGTCAGGCCAGAA CAGTCCGTCGGGGCCGAACTGTCTGCCGGGCCAGAACTGTCTGCCGGGCCAGAACCGTCTGCCGGGCCAGAACCGTCCGT CGGCGCCGTCACCTGGCCCACGCGGATCGGGGTGTTCATCGCGGGGGCGTACGGCTCCTACTTCGGGGCCGGGCTCGGTG TGGTCCTGCTCGGTGTTCTCGGCATCCTGCTGGTCGACGAGCTCCAGCGGACGAACGCCCTCAAGACCCTGCTCTCGTTC GGCGTGAACGCGATCGGCGTGGTGGTCTTTCTCGTTACCGCTCAGGTGTCCTGGGTGTACGCCGGAATCCTCGTCGTGAC GTCGGCGACCGGCGGGGTTCTTGGGGCACGGGTCGCCCGGCGGCTTCCCGCGCCAGCCCTGCGCGCGGCTGTGGTCGTGC TCGGTCTGGTCGTGGCCGCGGTCCTGCTGATCCGCGGCTGA
Upstream 100 bases:
>100_bases GGCCACCCGTCCGGACGAACGTGATTTTGTCGTTTCCAGCCCGGCGCGCCCGGTGGCGTTCCGGCGGACCAGCGGCTCGT CACGACCAGACGGAGGACAG
Downstream 100 bases:
>100_bases CGGGGTTGCGCCGGCGGCTGGGAACGCCGATCGGGGTCGTGCCCGGTGGCTGGTAGCGCGGTGAACCAGGCGTGCCCTGA GTATCGCCCGGAGACGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGPADAVLVAGAGLLAGAVNAVAGGGTLIAFPALLATGLPALTANITSSVGLVTGYAGGALGYRRELAGQTSRLKALGPP AMLGGLVGAVVLLLTPSDGFRSAVPFLVIVACLLLAAQSRLASLVARRRAAALATTPRQAPGGPIGAEPSVRAEPSVRPE QSVGAELSAGPELSAGPEPSAGPEPSVGAVTWPTRIGVFIAGAYGSYFGAGLGVVLLGVLGILLVDELQRTNALKTLLSF GVNAIGVVVFLVTAQVSWVYAGILVVTSATGGVLGARVARRLPAPALRAAVVVLGLVVAAVLLIRG
Sequences:
>Translated_306_residues MGPADAVLVAGAGLLAGAVNAVAGGGTLIAFPALLATGLPALTANITSSVGLVTGYAGGALGYRRELAGQTSRLKALGPP AMLGGLVGAVVLLLTPSDGFRSAVPFLVIVACLLLAAQSRLASLVARRRAAALATTPRQAPGGPIGAEPSVRAEPSVRPE QSVGAELSAGPELSAGPEPSAGPEPSVGAVTWPTRIGVFIAGAYGSYFGAGLGVVLLGVLGILLVDELQRTNALKTLLSF GVNAIGVVVFLVTAQVSWVYAGILVVTSATGGVLGARVARRLPAPALRAAVVVLGLVVAAVLLIRG >Mature_305_residues GPADAVLVAGAGLLAGAVNAVAGGGTLIAFPALLATGLPALTANITSSVGLVTGYAGGALGYRRELAGQTSRLKALGPPA MLGGLVGAVVLLLTPSDGFRSAVPFLVIVACLLLAAQSRLASLVARRRAAALATTPRQAPGGPIGAEPSVRAEPSVRPEQ SVGAELSAGPELSAGPEPSAGPEPSVGAVTWPTRIGVFIAGAYGSYFGAGLGVVLLGVLGILLVDELQRTNALKTLLSFG VNAIGVVVFLVTAQVSWVYAGILVVTSATGGVLGARVARRLPAPALRAAVVVLGLVVAAVLLIRG
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30150; Mature: 30019
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPADAVLVAGAGLLAGAVNAVAGGGTLIAFPALLATGLPALTANITSSVGLVTGYAGGA CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH LGYRRELAGQTSRLKALGPPAMLGGLVGAVVLLLTPSDGFRSAVPFLVIVACLLLAAQSR HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LASLVARRRAAALATTPRQAPGGPIGAEPSVRAEPSVRPEQSVGAELSAGPELSAGPEPS HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC AGPEPSVGAVTWPTRIGVFIAGAYGSYFGAGLGVVLLGVLGILLVDELQRTNALKTLLSF CCCCCCCCCEECHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVNAIGVVVFLVTAQVSWVYAGILVVTSATGGVLGARVARRLPAPALRAAVVVLGLVVAA CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH VLLIRG HHHHCC >Mature Secondary Structure GPADAVLVAGAGLLAGAVNAVAGGGTLIAFPALLATGLPALTANITSSVGLVTGYAGGA CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH LGYRRELAGQTSRLKALGPPAMLGGLVGAVVLLLTPSDGFRSAVPFLVIVACLLLAAQSR HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LASLVARRRAAALATTPRQAPGGPIGAEPSVRAEPSVRPEQSVGAELSAGPELSAGPEPS HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC AGPEPSVGAVTWPTRIGVFIAGAYGSYFGAGLGVVLLGVLGILLVDELQRTNALKTLLSF CCCCCCCCCEECHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVNAIGVVVFLVTAQVSWVYAGILVVTSATGGVLGARVARRLPAPALRAAVVVLGLVVAA CHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH VLLIRG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA