| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158313745
Identifier: 158313745
GI number: 158313745
Start: 2290282
End: 2291256
Strand: Direct
Name: 158313745
Synonym: Franean1_1910
Alternate gene names: NA
Gene position: 2290282-2291256 (Clockwise)
Preceding gene: 158313743
Following gene: 158313746
Centisome position: 25.5
GC content: 69.33
Gene sequence:
>975_bases ATGAGTGACCTGACCACCGCGACTCCTGGTCTGCGTGCCGCCGCTGAGGCGCTGCCCGGCGTGCTCCCGGTCGAGTACCT GGGCGCGGACGTCCGCTCGCTGACGGTCGTCGAGGAGGACGCCGACGACGCGATCCTGCTCCGGCCCGACGGGACGAGCA TCGACACCTGGCGGGAGAACTACCCGTACGCGCAGCGGCTCTCCCGCGACGAGTACGAGCGGGACAAGCGGCTGCTGCAG ATCGAGCTGCTGAAGCTGCAGTACTGGGTGAAGGACACCAGGCAGCGGCTCGTCCTCGTCTTCGAGGGGCGCGACGCGGC CGGCAAGGGCGGCACCATCAAGCGGTTCACCGAACATCTCAACCCGCGCGGCGCCCGGGTCGTCGCGCTGGAGAAGCCGA CCGAGACCGAGCGCGGGTCCTGGTACTTCCAGCGGTACATCGCCCACCTGCCCACCGCCGGCGAGATCGTCATGTTCGAC CGCTCCTGGTACAACCGGGCCGGGGTCGAGCGGGTGATGGGCTTCTGCTCCCCGGAGGAGTACCGGGAGTTCCTCCGCCA GGCGCCCGAGCTGGAGCGGATGCTCGTCCGGAGCGGCATTCACCTCATCAAGCTGTGGTTCTCGGTCTCCCGCCGGGAGC AGCAGACGCGGTTCCTCATCCGTCAGATCGACCCGGTGCGGCAGTGGAAGCTCAGCCCGGTCGACCTCGCGGCGCTCGAC CGGTGGGACGACTACACCGAGGCCAAGGAATCGATGTTCTTCTACACCGACATCCCCGAGGCCCCGTGGACGGTCATCAA GAGCAACGACAAGAAGCGGGCCCGGCTCGAGGCGATGCGGTACGTCCTCTCCCGGCTGGACTACCCCGGCCGGGACGAGT CGGTCATCGGTCGCCCCGACGAGCGGATCGTCGGCGCGGCCGCCGGGCTGCTGGAGCCCGGCGAGCAGGCCGACCGCCAG TTCCCGAAGCTCTGA
Upstream 100 bases:
>100_bases CCGGGAGGCGATACCGCCCGGCAGACAGGCTGCCCGGGAGACAAGCGGCCCGGGAGGTGCCGTATCCGACGACGGCCCGC TACCGCCACCGGAGGCTGCC
Downstream 100 bases:
>100_bases CCGTGTTGGCGCTCGGCTGTGGCTGTGGCTGTGGCGCTGTTCGCGGGGCTGTGTGGCGCCGCGGCCTCGGGTAGGTGGTG GGAGCAGGCTGCGAGGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSDLTTATPGLRAAAEALPGVLPVEYLGADVRSLTVVEEDADDAILLRPDGTSIDTWRENYPYAQRLSRDEYERDKRLLQ IELLKLQYWVKDTRQRLVLVFEGRDAAGKGGTIKRFTEHLNPRGARVVALEKPTETERGSWYFQRYIAHLPTAGEIVMFD RSWYNRAGVERVMGFCSPEEYREFLRQAPELERMLVRSGIHLIKLWFSVSRREQQTRFLIRQIDPVRQWKLSPVDLAALD RWDDYTEAKESMFFYTDIPEAPWTVIKSNDKKRARLEAMRYVLSRLDYPGRDESVIGRPDERIVGAAAGLLEPGEQADRQ FPKL
Sequences:
>Translated_324_residues MSDLTTATPGLRAAAEALPGVLPVEYLGADVRSLTVVEEDADDAILLRPDGTSIDTWRENYPYAQRLSRDEYERDKRLLQ IELLKLQYWVKDTRQRLVLVFEGRDAAGKGGTIKRFTEHLNPRGARVVALEKPTETERGSWYFQRYIAHLPTAGEIVMFD RSWYNRAGVERVMGFCSPEEYREFLRQAPELERMLVRSGIHLIKLWFSVSRREQQTRFLIRQIDPVRQWKLSPVDLAALD RWDDYTEAKESMFFYTDIPEAPWTVIKSNDKKRARLEAMRYVLSRLDYPGRDESVIGRPDERIVGAAAGLLEPGEQADRQ FPKL >Mature_323_residues SDLTTATPGLRAAAEALPGVLPVEYLGADVRSLTVVEEDADDAILLRPDGTSIDTWRENYPYAQRLSRDEYERDKRLLQI ELLKLQYWVKDTRQRLVLVFEGRDAAGKGGTIKRFTEHLNPRGARVVALEKPTETERGSWYFQRYIAHLPTAGEIVMFDR SWYNRAGVERVMGFCSPEEYREFLRQAPELERMLVRSGIHLIKLWFSVSRREQQTRFLIRQIDPVRQWKLSPVDLAALDR WDDYTEAKESMFFYTDIPEAPWTVIKSNDKKRARLEAMRYVLSRLDYPGRDESVIGRPDERIVGAAAGLLEPGEQADRQF PKL
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 37569; Mature: 37438
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLTTATPGLRAAAEALPGVLPVEYLGADVRSLTVVEEDADDAILLRPDGTSIDTWREN CCCCCCCCCCHHHHHHHCCCCCCHHHHCCCHHEEEEEECCCCCEEEECCCCCCCCCHHHC YPYAQRLSRDEYERDKRLLQIELLKLQYWVKDTRQRLVLVFEGRDAAGKGGTIKRFTEHL CCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHC NPRGARVVALEKPTETERGSWYFQRYIAHLPTAGEIVMFDRSWYNRAGVERVMGFCSPEE CCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCHHH YREFLRQAPELERMLVRSGIHLIKLWFSVSRREQQTRFLIRQIDPVRQWKLSPVDLAALD HHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHH RWDDYTEAKESMFFYTDIPEAPWTVIKSNDKKRARLEAMRYVLSRLDYPGRDESVIGRPD CCCHHHHHHHCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ERIVGAAAGLLEPGEQADRQFPKL HHHHHHHHHCCCCCHHHHHCCCCC >Mature Secondary Structure SDLTTATPGLRAAAEALPGVLPVEYLGADVRSLTVVEEDADDAILLRPDGTSIDTWREN CCCCCCCCCHHHHHHHCCCCCCHHHHCCCHHEEEEEECCCCCEEEECCCCCCCCCHHHC YPYAQRLSRDEYERDKRLLQIELLKLQYWVKDTRQRLVLVFEGRDAAGKGGTIKRFTEHL CCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHC NPRGARVVALEKPTETERGSWYFQRYIAHLPTAGEIVMFDRSWYNRAGVERVMGFCSPEE CCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCHHH YREFLRQAPELERMLVRSGIHLIKLWFSVSRREQQTRFLIRQIDPVRQWKLSPVDLAALD HHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHH RWDDYTEAKESMFFYTDIPEAPWTVIKSNDKKRARLEAMRYVLSRLDYPGRDESVIGRPD CCCHHHHHHHCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ERIVGAAAGLLEPGEQADRQFPKL HHHHHHHHHCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]