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The map label for this gene is ugpB [C]

Identifier: 158313731

GI number: 158313731

Start: 2273962

End: 2275299

Strand: Direct

Name: ugpB [C]

Synonym: Franean1_1895

Alternate gene names: 158313731

Gene position: 2273962-2275299 (Clockwise)

Preceding gene: 158313729

Following gene: 158313732

Centisome position: 25.32

GC content: 70.25

Gene sequence:

>1338_bases
ATGACAGGCCGGACAGGACGCGTGCGTGGTCGGCGGCTGATTCCCGCATTGCTCGCAGCCGTTTCGGTGTTCGCCGCGGC
GGCATGCGGCGGCGGCGACTCGAGCGCCGAGGGCACCGATGGGGCGCTGGCTCCACTGGACAGCGCGACCAAGGTCACCA
TCAAGTTCCTCTCGTACAACTACGGCACCCCCGGGCTCGGCGGCACGGGGACGCAGGCCCTCATCGACGCGTTCGAGAAG
GCACACCCCAACATCACCGTCGAGCCGCAGGGCGTGGCGACCAAGGACGTCCTCACCCGGCTGCGGACCGACACCGCCGC
GGGCAGCCCGCCGGACGTCGCGCAGATCGGCTGGAGCAAGATGGCCGAGGCCGTGCAGGCCCTGCCGATCGTGCCCGTCC
AGGAGATCCCGCCGACGTCGGAGTGGGACGAGCACGTCGCCGGGATGTCGAAGAGCATCCTCTCGGCCGTCTCGGTCGAC
GACCAGGTGAAGGCGATGCCCTACACCATGTCGATCCCGGTGCTCTACTACAACGCCGACCTCTTCCGGGCCGCCGGGCT
CGACCCGGCGAAGCCGCCGACGACGATCGCGGACGTCAAGGCAGCCGGGCTGGCCATCAAGGCCACCGGGTCCGAGGGCG
TCTACTACGGCGTCGTGGACTCCGCGAAGTCCGACTTCCTCACCCAGTCGGTGGTGAACGGCAACGGCGGCAGCCTGGTC
GACGCCAACGGCGAGGTCACCCTCGACAAGCCGCCGGCGGTCGGGGCGCTCACGGCGGTGCAGGACCTCGTCAAATCCGG
CGCGATGCCGTCGGTGAACACCGAGACGGCGCTGGCCGCCTTCACTACCGGCAAACTCGGCATGCTCGTCACCAGCACCT
CCGTCCTGGCCAGCGCGATGAAGGCCGCCGACGGCAAGTTCGAGCTGCGGACCGCGGGCTTCCCGACCTTCGGCTCGAAG
CCCGCCCGGCCCACCTACTCGGGCGCGGGGCTCGCGGTGCTGGCCAAGGACGACGACCACCGCCGGGCGGCCTGGGAGTT
CATCAAGTTCGTCACGAGCGACGCCGGCTTCGAGATCATCACCTCCAAGATCGGCTACCTGCCGCTGCGCGAGTCCGTCG
CCACCAAGCTGGCGGACTCGGCGATCGTGAAGCTCCTCGCCCCGTCGCTGGAGCAGCTCGACACCGTCGCGCCGTACACC
GCCTTCCGCGGCACGAAGGCGAACCAGGCGGTCGTCGCGCTGCAGGACGAGGCGGTCGAACCGATCGTGCTGCGGGGCGC
GGACCCGGGGCCGACGCTCACCTCGGTCGCCGAGAAGATCCGGAAGCTCAGCGCCTGA

Upstream 100 bases:

>100_bases
CGGGCTGGCACGGTTCGCCCCTGCGATTCCACCAGTGCGTTTCATCGGCCTCACGCACGCCGGCGACACGGGTGTGCACG
AATCTCGGAAAGGTAAAAGT

Downstream 100 bases:

>100_bases
CGATGACCACCCTCGAGGCCGGCGCCTCGACGCTCGACGCGCGGGGGCACGCGAACAGGCGTGTCCCCGCCGCCGCCGTC
CGCGCCCGACTGACGCCCTG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MTGRTGRVRGRRLIPALLAAVSVFAAAACGGGDSSAEGTDGALAPLDSATKVTIKFLSYNYGTPGLGGTGTQALIDAFEK
AHPNITVEPQGVATKDVLTRLRTDTAAGSPPDVAQIGWSKMAEAVQALPIVPVQEIPPTSEWDEHVAGMSKSILSAVSVD
DQVKAMPYTMSIPVLYYNADLFRAAGLDPAKPPTTIADVKAAGLAIKATGSEGVYYGVVDSAKSDFLTQSVVNGNGGSLV
DANGEVTLDKPPAVGALTAVQDLVKSGAMPSVNTETALAAFTTGKLGMLVTSTSVLASAMKAADGKFELRTAGFPTFGSK
PARPTYSGAGLAVLAKDDDHRRAAWEFIKFVTSDAGFEIITSKIGYLPLRESVATKLADSAIVKLLAPSLEQLDTVAPYT
AFRGTKANQAVVALQDEAVEPIVLRGADPGPTLTSVAEKIRKLSA

Sequences:

>Translated_445_residues
MTGRTGRVRGRRLIPALLAAVSVFAAAACGGGDSSAEGTDGALAPLDSATKVTIKFLSYNYGTPGLGGTGTQALIDAFEK
AHPNITVEPQGVATKDVLTRLRTDTAAGSPPDVAQIGWSKMAEAVQALPIVPVQEIPPTSEWDEHVAGMSKSILSAVSVD
DQVKAMPYTMSIPVLYYNADLFRAAGLDPAKPPTTIADVKAAGLAIKATGSEGVYYGVVDSAKSDFLTQSVVNGNGGSLV
DANGEVTLDKPPAVGALTAVQDLVKSGAMPSVNTETALAAFTTGKLGMLVTSTSVLASAMKAADGKFELRTAGFPTFGSK
PARPTYSGAGLAVLAKDDDHRRAAWEFIKFVTSDAGFEIITSKIGYLPLRESVATKLADSAIVKLLAPSLEQLDTVAPYT
AFRGTKANQAVVALQDEAVEPIVLRGADPGPTLTSVAEKIRKLSA
>Mature_444_residues
TGRTGRVRGRRLIPALLAAVSVFAAAACGGGDSSAEGTDGALAPLDSATKVTIKFLSYNYGTPGLGGTGTQALIDAFEKA
HPNITVEPQGVATKDVLTRLRTDTAAGSPPDVAQIGWSKMAEAVQALPIVPVQEIPPTSEWDEHVAGMSKSILSAVSVDD
QVKAMPYTMSIPVLYYNADLFRAAGLDPAKPPTTIADVKAAGLAIKATGSEGVYYGVVDSAKSDFLTQSVVNGNGGSLVD
ANGEVTLDKPPAVGALTAVQDLVKSGAMPSVNTETALAAFTTGKLGMLVTSTSVLASAMKAADGKFELRTAGFPTFGSKP
ARPTYSGAGLAVLAKDDDHRRAAWEFIKFVTSDAGFEIITSKIGYLPLRESVATKLADSAIVKLLAPSLEQLDTVAPYTA
FRGTKANQAVVALQDEAVEPIVLRGADPGPTLTSVAEKIRKLSA

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=218, Percent_Identity=27.5229357798165, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45951; Mature: 45819

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRTGRVRGRRLIPALLAAVSVFAAAACGGGDSSAEGTDGALAPLDSATKVTIKFLSYN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
YGTPGLGGTGTQALIDAFEKAHPNITVEPQGVATKDVLTRLRTDTAAGSPPDVAQIGWSK
CCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHCHHH
MAEAVQALPIVPVQEIPPTSEWDEHVAGMSKSILSAVSVDDQVKAMPYTMSIPVLYYNAD
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEEEEECCH
LFRAAGLDPAKPPTTIADVKAAGLAIKATGSEGVYYGVVDSAKSDFLTQSVVNGNGGSLV
HHHHCCCCCCCCCCCHHHHHHCCEEEEECCCCCEEEEEECCCHHHHHHHHHHCCCCCEEE
DANGEVTLDKPPAVGALTAVQDLVKSGAMPSVNTETALAAFTTGKLGMLVTSTSVLASAM
ECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHH
KAADGKFELRTAGFPTFGSKPARPTYSGAGLAVLAKDDDHRRAAWEFIKFVTSDAGFEII
HHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHH
TSKIGYLPLRESVATKLADSAIVKLLAPSLEQLDTVAPYTAFRGTKANQAVVALQDEAVE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCC
PIVLRGADPGPTLTSVAEKIRKLSA
CEEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGRTGRVRGRRLIPALLAAVSVFAAAACGGGDSSAEGTDGALAPLDSATKVTIKFLSYN
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
YGTPGLGGTGTQALIDAFEKAHPNITVEPQGVATKDVLTRLRTDTAAGSPPDVAQIGWSK
CCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHCHHH
MAEAVQALPIVPVQEIPPTSEWDEHVAGMSKSILSAVSVDDQVKAMPYTMSIPVLYYNAD
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEEEEECCH
LFRAAGLDPAKPPTTIADVKAAGLAIKATGSEGVYYGVVDSAKSDFLTQSVVNGNGGSLV
HHHHCCCCCCCCCCCHHHHHHCCEEEEECCCCCEEEEEECCCHHHHHHHHHHCCCCCEEE
DANGEVTLDKPPAVGALTAVQDLVKSGAMPSVNTETALAAFTTGKLGMLVTSTSVLASAM
ECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHH
KAADGKFELRTAGFPTFGSKPARPTYSGAGLAVLAKDDDHRRAAWEFIKFVTSDAGFEII
HHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHH
TSKIGYLPLRESVATKLADSAIVKLLAPSLEQLDTVAPYTAFRGTKANQAVVALQDEAVE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCC
PIVLRGADPGPTLTSVAEKIRKLSA
CEEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA