| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313666
Identifier: 158313666
GI number: 158313666
Start: 2195851
End: 2197320
Strand: Direct
Name: 158313666
Synonym: Franean1_1830
Alternate gene names: NA
Gene position: 2195851-2197320 (Clockwise)
Preceding gene: 158313665
Following gene: 158313667
Centisome position: 24.45
GC content: 79.39
Gene sequence:
>1470_bases GTGCGCGGCTTTGCGGGTGGTTCGCGAAAGGGAGACGGCCGCCGGGGCGACCGCCCGGCCAGGTGGGCGACGGTGGTGCT CGCGGCCGCCCTCGTCGCCGCCCCCCTCCCGTCCTACGTCGGGATAGGCCTGTCCGGCCGGGCCGCCGCCACGACCGCGC GGGTCTCGACGTCCACCCCGGCCCAGCCGCCGGCGTCCGTGCCCGGCGGTGCCGGTGCCGGCGCGCTGACCGCCGTGGCC ACCCAGGTCCCGCCGGGCACCGTGACGCGCACCGGCACCCACCTCACCGACAGCGCCGGACGGGTCGTCCTGCCCCGCGG TGTCACCGTTCCGGCCGGGCGGGTCCCCACCGCCGGCGAGATCGCGCAGTGGCTCGACTTCGGCTTCACCGGCCTGCGCC TGGAGATCCCGATGACCCGTGGCGGGCTGTTCCCGCCGTCGGGCGAGGCCCCGCCACCGGGCGACCGGGAGCTGGGCGGC CTCGACCAGGCGGGCATGGTCGTCCGGGAGCTGACCGGCCGCGGGTTCACCGTGGTGCTGCGGATCGTCCCGGGCGCCGC CGGCTACACCCCCTCGGTCGCGGATCTGACGTCCGGTCTGACCCGCCTGGCCGGCCGTTTCGGCGGGGTGGCCGGGCTGA TCGGCTACGAGGTGCCGGCCGGGGTCGGCTCGGCCGATCTCGCCGGCGCCGTGCGGGCCGTCGACACGAACCACACGCTC TGGGTCGAGCAGCCGGCGCCGTTCGACCCCGCGGCGCGGGTCGCGGCCGCCGAGGGGGCCGGGTACGTCACCGGCTGGGT GGACGGCTCCGCGCCCCGGGCCGCCGCGCTGGCCGACGCCGGGGACGCGTTCGGGCTTGGCTGGTTCTTCGACGGCCCGG CCGCCGAGTCCTCCGCGACCGGCATCGGGCCGGGTGAGGTGCGGGCGCTCACCGCGCCCCCGGCGGAGATCGTGCGGCCC TACCCGGCCGCCGTGGCGGGCACGCCGGAGTCGTTCAAGCGCGACGGCGCGGGCGTCTTCCGCCTCGTCTACCAGCCGTC CCGGGCCGGCGGCGGGACGTTCGCCCCGGGCACGGCGACGGCGGTCGTCCTGCCCGCGTGGGCCTATCCGTCGGGCTACC AGGCGCGGGTCACCGGTGGCCAGGTCACCTCCCCGCCCGGAGCCGGGGTGCTGTGCGTGGTCGCGGGGGCGGGCGCGACC CGGGTCAGCGTGGAGGTGACGCCTGCCGCCGGCGCGCCGGCGCCGGTCGCGCCCACCCGTGCGGGTGCCGTCAACTGCGC CGCCGCCCCGGGAACGGGGCCGGGAAGCGCCGGCGCTCCGGCGGGGCAGCCGCCGTCCGGGGCACCCGCGGCGACCTCCG CGGCCGACGACTCCGACCCCGTCCTGCTCCTGCTGGTCCTTCCGCTGCTGGGCGCCGCCGTGGCGGCCGCCGTGCTCGGC CCCGTCTTCGTCCGGCTACGCCGCCGCTGA
Upstream 100 bases:
>100_bases GCGCAGGGGACTCTTCTCCCGGCGCCGTACCCCCTGCCGGTGAGCCGCCGGTCCGCAGGGCGGTCTGAGCGGTTCCGCGC AGGCACGGCAGGATTGCAGG
Downstream 100 bases:
>100_bases CCGGCGCCGCCCCCGGCCCCTGGCCGGCGCCCCGGCCGGGCGGAGCACACTGGGGGTGTGGGCGGCCGTTTCTTCTACGA CACCGAGTTCATCGAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MRGFAGGSRKGDGRRGDRPARWATVVLAAALVAAPLPSYVGIGLSGRAAATTARVSTSTPAQPPASVPGGAGAGALTAVA TQVPPGTVTRTGTHLTDSAGRVVLPRGVTVPAGRVPTAGEIAQWLDFGFTGLRLEIPMTRGGLFPPSGEAPPPGDRELGG LDQAGMVVRELTGRGFTVVLRIVPGAAGYTPSVADLTSGLTRLAGRFGGVAGLIGYEVPAGVGSADLAGAVRAVDTNHTL WVEQPAPFDPAARVAAAEGAGYVTGWVDGSAPRAAALADAGDAFGLGWFFDGPAAESSATGIGPGEVRALTAPPAEIVRP YPAAVAGTPESFKRDGAGVFRLVYQPSRAGGGTFAPGTATAVVLPAWAYPSGYQARVTGGQVTSPPGAGVLCVVAGAGAT RVSVEVTPAAGAPAPVAPTRAGAVNCAAAPGTGPGSAGAPAGQPPSGAPAATSAADDSDPVLLLLVLPLLGAAVAAAVLG PVFVRLRRR
Sequences:
>Translated_489_residues MRGFAGGSRKGDGRRGDRPARWATVVLAAALVAAPLPSYVGIGLSGRAAATTARVSTSTPAQPPASVPGGAGAGALTAVA TQVPPGTVTRTGTHLTDSAGRVVLPRGVTVPAGRVPTAGEIAQWLDFGFTGLRLEIPMTRGGLFPPSGEAPPPGDRELGG LDQAGMVVRELTGRGFTVVLRIVPGAAGYTPSVADLTSGLTRLAGRFGGVAGLIGYEVPAGVGSADLAGAVRAVDTNHTL WVEQPAPFDPAARVAAAEGAGYVTGWVDGSAPRAAALADAGDAFGLGWFFDGPAAESSATGIGPGEVRALTAPPAEIVRP YPAAVAGTPESFKRDGAGVFRLVYQPSRAGGGTFAPGTATAVVLPAWAYPSGYQARVTGGQVTSPPGAGVLCVVAGAGAT RVSVEVTPAAGAPAPVAPTRAGAVNCAAAPGTGPGSAGAPAGQPPSGAPAATSAADDSDPVLLLLVLPLLGAAVAAAVLG PVFVRLRRR >Mature_489_residues MRGFAGGSRKGDGRRGDRPARWATVVLAAALVAAPLPSYVGIGLSGRAAATTARVSTSTPAQPPASVPGGAGAGALTAVA TQVPPGTVTRTGTHLTDSAGRVVLPRGVTVPAGRVPTAGEIAQWLDFGFTGLRLEIPMTRGGLFPPSGEAPPPGDRELGG LDQAGMVVRELTGRGFTVVLRIVPGAAGYTPSVADLTSGLTRLAGRFGGVAGLIGYEVPAGVGSADLAGAVRAVDTNHTL WVEQPAPFDPAARVAAAEGAGYVTGWVDGSAPRAAALADAGDAFGLGWFFDGPAAESSATGIGPGEVRALTAPPAEIVRP YPAAVAGTPESFKRDGAGVFRLVYQPSRAGGGTFAPGTATAVVLPAWAYPSGYQARVTGGQVTSPPGAGVLCVVAGAGAT RVSVEVTPAAGAPAPVAPTRAGAVNCAAAPGTGPGSAGAPAGQPPSGAPAATSAADDSDPVLLLLVLPLLGAAVAAAVLG PVFVRLRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47894; Mature: 47894
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGFAGGSRKGDGRRGDRPARWATVVLAAALVAAPLPSYVGIGLSGRAAATTARVSTSTP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCC AQPPASVPGGAGAGALTAVATQVPPGTVTRTGTHLTDSAGRVVLPRGVTVPAGRVPTAGE CCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCEEECCCCCEEECCCCCCCCCCCCCHHH IAQWLDFGFTGLRLEIPMTRGGLFPPSGEAPPPGDRELGGLDQAGMVVRELTGRGFTVVL HHHHHHCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE RIVPGAAGYTPSVADLTSGLTRLAGRFGGVAGLIGYEVPAGVGSADLAGAVRAVDTNHTL EEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHEEEECCCCEE WVEQPAPFDPAARVAAAEGAGYVTGWVDGSAPRAAALADAGDAFGLGWFFDGPAAESSAT EECCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCEECEEECCCCCCCCCC GIGPGEVRALTAPPAEIVRPYPAAVAGTPESFKRDGAGVFRLVYQPSRAGGGTFAPGTAT CCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCE AVVLPAWAYPSGYQARVTGGQVTSPPGAGVLCVVAGAGATRVSVEVTPAAGAPAPVAPTR EEEEECCCCCCCCEEEECCCEECCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCC AGAVNCAAAPGTGPGSAGAPAGQPPSGAPAATSAADDSDPVLLLLVLPLLGAAVAAAVLG CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH PVFVRLRRR HHHHHHCCC >Mature Secondary Structure MRGFAGGSRKGDGRRGDRPARWATVVLAAALVAAPLPSYVGIGLSGRAAATTARVSTSTP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCC AQPPASVPGGAGAGALTAVATQVPPGTVTRTGTHLTDSAGRVVLPRGVTVPAGRVPTAGE CCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCEEECCCCCEEECCCCCCCCCCCCCHHH IAQWLDFGFTGLRLEIPMTRGGLFPPSGEAPPPGDRELGGLDQAGMVVRELTGRGFTVVL HHHHHHCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE RIVPGAAGYTPSVADLTSGLTRLAGRFGGVAGLIGYEVPAGVGSADLAGAVRAVDTNHTL EEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHEEEECCCCEE WVEQPAPFDPAARVAAAEGAGYVTGWVDGSAPRAAALADAGDAFGLGWFFDGPAAESSAT EECCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCEECEEECCCCCCCCCC GIGPGEVRALTAPPAEIVRPYPAAVAGTPESFKRDGAGVFRLVYQPSRAGGGTFAPGTAT CCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCE AVVLPAWAYPSGYQARVTGGQVTSPPGAGVLCVVAGAGATRVSVEVTPAAGAPAPVAPTR EEEEECCCCCCCCEEEECCCEECCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCC AGAVNCAAAPGTGPGSAGAPAGQPPSGAPAATSAADDSDPVLLLLVLPLLGAAVAAAVLG CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH PVFVRLRRR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA