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The map label for this gene is qcrC [H]

Identifier: 158313646

GI number: 158313646

Start: 2172224

End: 2173108

Strand: Direct

Name: qcrC [H]

Synonym: Franean1_1810

Alternate gene names: 158313646

Gene position: 2172224-2173108 (Clockwise)

Preceding gene: 158313645

Following gene: 158313647

Centisome position: 24.18

GC content: 72.54

Gene sequence:

>885_bases
ATGACCACATCCAAGGCATCCGGAGCCGCGGCGTCCCCGACCTCGTCCGCGGGCGAGGCCGGCAGACCCCGGCTCATCTC
GGTGAGGAACGCCGGGCGATCCCGGTCGACCTCCGCGCGCCGCCGACGGCGGTCGTCGTCCATCGTTCTTCTCCTCGGCC
TGCTGGCGACGGGGGTGATGTGGACGGTGCTCGCTCCAGGCGGCAACGCGACGGAGACGCCGGACGCCAACGAGGCCGTG
CGCCAGGGCCGCGCCCTGTTCCTGCAGGGTTGCGCGACCTGCCACGGGCTGAACGCCCAGGGCTCGACCGAGGGCCCGAG
CCTGATCGGCGTCGGCGCGGCCGCGGTGGACTTCCAGATGTCCACCGGCCGCATGCCGCTCGCCGCGCCGGCGGCCCAGG
CCGACCGCAAGCCCCCGTCGTACTCGGAGACCCAGATCGACCAGATCGCGGCCTACGTCCAGACCCTGGGCGGCGGTACG
CAGGTGCCCGAGCTGACGGACGCGGATCTCAACGACGCCGACCTCGCCGAGGGCGGTGAGCTCTTCCTCGCGAACTGCGC
CCAGTGCCACCAGGCCGCCGGCGCCGGCGCCCCGCTCACCTACGGCAAGTTCGCGCCGTCGCTGAGCCAGGCCACGCCCG
AACAGGTCGTCGAGGCGATGCGGACCGGCCCGGAGTCGATGCCGGTGTTCGGTCCCGGTCAGATCAACGATGACGAGGCC
GTCGCGGTCGCCGCGTACGTCCGTCACCTCCAGGACACCCCGTCACCCGGCGGTTCCTCGATCGGTAAGTACGGGCCGGT
CCCGGAGGGCCTGGTCGCGTGGGTGATAGGCATCGGCGCGCTGCTCGGCGTCTGCCTCTGGATCGGAGCGAGGCAGAAGC
TGTGA

Upstream 100 bases:

>100_bases
AGAAGGCGACGTCAGCGATCGTCGTGTCGTACTACTGGCACTTCGTCGACGTCGTCTGGATCGCCCTGTTCGCCACCATC
TACCTCCTCCAGTGAGCGAC

Downstream 100 bases:

>100_bases
GCGCCAACCAGGGCCCGACCGGGCCGGAGTCCGCAGACGGCGGCGAGCTGCCGCCGGACTCGCCGCAGCGGCGCATGCAC
TACGCCGGCTATCAGGGAGA

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome bc1 complex cytochrome c subunit [H]

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTTSKASGAAASPTSSAGEAGRPRLISVRNAGRSRSTSARRRRRSSSIVLLLGLLATGVMWTVLAPGGNATETPDANEAV
RQGRALFLQGCATCHGLNAQGSTEGPSLIGVGAAAVDFQMSTGRMPLAAPAAQADRKPPSYSETQIDQIAAYVQTLGGGT
QVPELTDADLNDADLAEGGELFLANCAQCHQAAGAGAPLTYGKFAPSLSQATPEQVVEAMRTGPESMPVFGPGQINDDEA
VAVAAYVRHLQDTPSPGGSSIGKYGPVPEGLVAWVIGIGALLGVCLWIGARQKL

Sequences:

>Translated_294_residues
MTTSKASGAAASPTSSAGEAGRPRLISVRNAGRSRSTSARRRRRSSSIVLLLGLLATGVMWTVLAPGGNATETPDANEAV
RQGRALFLQGCATCHGLNAQGSTEGPSLIGVGAAAVDFQMSTGRMPLAAPAAQADRKPPSYSETQIDQIAAYVQTLGGGT
QVPELTDADLNDADLAEGGELFLANCAQCHQAAGAGAPLTYGKFAPSLSQATPEQVVEAMRTGPESMPVFGPGQINDDEA
VAVAAYVRHLQDTPSPGGSSIGKYGPVPEGLVAWVIGIGALLGVCLWIGARQKL
>Mature_293_residues
TTSKASGAAASPTSSAGEAGRPRLISVRNAGRSRSTSARRRRRSSSIVLLLGLLATGVMWTVLAPGGNATETPDANEAVR
QGRALFLQGCATCHGLNAQGSTEGPSLIGVGAAAVDFQMSTGRMPLAAPAAQADRKPPSYSETQIDQIAAYVQTLGGGTQ
VPELTDADLNDADLAEGGELFLANCAQCHQAAGAGAPLTYGKFAPSLSQATPEQVVEAMRTGPESMPVFGPGQINDDEAV
AVAAYVRHLQDTPSPGGSSIGKYGPVPEGLVAWVIGIGALLGVCLWIGARQKL

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR009152 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 30008; Mature: 29877

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSKASGAAASPTSSAGEAGRPRLISVRNAGRSRSTSARRRRRSSSIVLLLGLLATGVM
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
WTVLAPGGNATETPDANEAVRQGRALFLQGCATCHGLNAQGSTEGPSLIGVGAAAVDFQM
HEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHEEEEE
STGRMPLAAPAAQADRKPPSYSETQIDQIAAYVQTLGGGTQVPELTDADLNDADLAEGGE
CCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCH
LFLANCAQCHQAAGAGAPLTYGKFAPSLSQATPEQVVEAMRTGPESMPVFGPGQINDDEA
HHHHHHHHHHHHCCCCCCCCCHHCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH
VAVAAYVRHLQDTPSPGGSSIGKYGPVPEGLVAWVIGIGALLGVCLWIGARQKL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTSKASGAAASPTSSAGEAGRPRLISVRNAGRSRSTSARRRRRSSSIVLLLGLLATGVM
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
WTVLAPGGNATETPDANEAVRQGRALFLQGCATCHGLNAQGSTEGPSLIGVGAAAVDFQM
HEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHEEEEE
STGRMPLAAPAAQADRKPPSYSETQIDQIAAYVQTLGGGTQVPELTDADLNDADLAEGGE
CCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCH
LFLANCAQCHQAAGAGAPLTYGKFAPSLSQATPEQVVEAMRTGPESMPVFGPGQINDDEA
HHHHHHHHHHHHCCCCCCCCCHHCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH
VAVAAYVRHLQDTPSPGGSSIGKYGPVPEGLVAWVIGIGALLGVCLWIGARQKL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]