| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313644
Identifier: 158313644
GI number: 158313644
Start: 2170220
End: 2170831
Strand: Direct
Name: 158313644
Synonym: Franean1_1808
Alternate gene names: NA
Gene position: 2170220-2170831 (Clockwise)
Preceding gene: 158313643
Following gene: 158313645
Centisome position: 24.16
GC content: 71.08
Gene sequence:
>612_bases ATGGCGCTGCGCACGATGGCGTTCACCGCCGCCGACATCACCACCGACCACACGGCCTACTCCGCCCAGCGGGTCCAGGC CCGCTCGAGGATGCTCCCGATCCGCGCCGAGCGGCGCGTCCGGGTCGGCGACATCCTGCTCTTCGAGTTCGAGAACGCCG AGACGCTGCGCTACCAGGTGCAGGAGATGGTCTACACCGAGCGGCTCACCGCCCCCGGGGAGGTCGCCCACGAGGTCGAG GCCTACTCGCGGCTGCTGCCGTCCAGCCACGCCCTGACCGCCACGATGTTCATCGAGCTCAACCAGGTCGAGGCCGTGCG CGACGAGCTGGCCCGTCTCTCCGGCGTCCAGCGCCGGGTGGCGCTGGAGATCGGCGGGGTAACCGTGCCCGCCGTCGAGA TCCCGGGCGTGGACGAGGACCCCGATCAGCCCAGCGAGACGGTGTCGGTCCACATGCTCCGGTTCCCGCTCACCGACGGC ACCAGGGATGCGTTCCGCGACCCGGAGGTCACCGCGGAGCTGGTGGTCGATCATCCCGCCTACAGCGACGCGACCCCCAT CGTCGGTGCCGTCCGCCGGAGCCTGATCGCGGATCTCGCGCTGCCGAGCTGA
Upstream 100 bases:
>100_bases CATCCGGCACCTCGGCAACACCCGAAAGACCGTTACACCCAGTACGTCCGGACGGCCGTCGAGGTCGATGCGTCCTCGCG ACGGGGAAGGAGCCAGCACG
Downstream 100 bases:
>100_bases CGGCCGCGGCCGCCGATCTCGGGCCGGAGCCGGGTACACGCGGCCGGAGCCGGGTATGCGAGGCCACAGAAGGCACGACT CCCGGATCGACAGGAGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MALRTMAFTAADITTDHTAYSAQRVQARSRMLPIRAERRVRVGDILLFEFENAETLRYQVQEMVYTERLTAPGEVAHEVE AYSRLLPSSHALTATMFIELNQVEAVRDELARLSGVQRRVALEIGGVTVPAVEIPGVDEDPDQPSETVSVHMLRFPLTDG TRDAFRDPEVTAELVVDHPAYSDATPIVGAVRRSLIADLALPS
Sequences:
>Translated_203_residues MALRTMAFTAADITTDHTAYSAQRVQARSRMLPIRAERRVRVGDILLFEFENAETLRYQVQEMVYTERLTAPGEVAHEVE AYSRLLPSSHALTATMFIELNQVEAVRDELARLSGVQRRVALEIGGVTVPAVEIPGVDEDPDQPSETVSVHMLRFPLTDG TRDAFRDPEVTAELVVDHPAYSDATPIVGAVRRSLIADLALPS >Mature_202_residues ALRTMAFTAADITTDHTAYSAQRVQARSRMLPIRAERRVRVGDILLFEFENAETLRYQVQEMVYTERLTAPGEVAHEVEA YSRLLPSSHALTATMFIELNQVEAVRDELARLSGVQRRVALEIGGVTVPAVEIPGVDEDPDQPSETVSVHMLRFPLTDGT RDAFRDPEVTAELVVDHPAYSDATPIVGAVRRSLIADLALPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22470; Mature: 22339
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRTMAFTAADITTDHTAYSAQRVQARSRMLPIRAERRVRVGDILLFEFENAETLRYQV CCCHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECEEEEEEECCCHHHHHHH QEMVYTERLTAPGEVAHEVEAYSRLLPSSHALTATMFIELNQVEAVRDELARLSGVQRRV HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHEE ALEIGGVTVPAVEIPGVDEDPDQPSETVSVHMLRFPLTDGTRDAFRDPEVTAELVVDHPA EEEECCEEECEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHCCCCCCEEEEEEECCC YSDATPIVGAVRRSLIADLALPS CCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALRTMAFTAADITTDHTAYSAQRVQARSRMLPIRAERRVRVGDILLFEFENAETLRYQV CCHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECEEEEEEECCCHHHHHHH QEMVYTERLTAPGEVAHEVEAYSRLLPSSHALTATMFIELNQVEAVRDELARLSGVQRRV HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHEE ALEIGGVTVPAVEIPGVDEDPDQPSETVSVHMLRFPLTDGTRDAFRDPEVTAELVVDHPA EEEECCEEECEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHCCCCCCEEEEEEECCC YSDATPIVGAVRRSLIADLALPS CCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA