Click here to switch to the map view.

The map label for this gene is ctaC [H]

Identifier: 158313637

GI number: 158313637

Start: 2163807

End: 2164673

Strand: Direct

Name: ctaC [H]

Synonym: Franean1_1801

Alternate gene names: 158313637

Gene position: 2163807-2164673 (Clockwise)

Preceding gene: 158313634

Following gene: 158313638

Centisome position: 24.09

GC content: 68.17

Gene sequence:

>867_bases
ATGGCCCCGGCTGACACCGCGGACGCGGACGCGGACGCGTCGCCGAGCCGTCGGGTTGGGCACCGACGGCCGCGCCGGCG
CCGCGTCAATGCGCGCCTGGGCGCCACGCTGGTGGCCGTCGGCCTGCTGGCGACCGCCTGCGACGTCCCCAATTTCGGAT
TCCCGGACGGTGTGACCAACCACACCCCGCGGATCCTGAACATGTGGCAGGGCTCGGTGATCGCCGCCCTGGCCGTCGGT
GTGTTCGTGTGGGCCCTGATCTTCTACGCGGTCGTCGTGTTCCGGAAGCGCAGTGACGTTCTGCCGCGCCAGGTCCGGTA
CAACCTTCCCGTCGAGATCCTTTACACCGTCGTGCCAGTCGTGATCGTGGCGGGCCTGTTCTACTACACCGCTCGTGACG
AGTCCGAGATCACCAAGCTCTCGGACAAGCCCGACGTGACGGTGAACGTCATCGGTTTCCGGTGGAACTGGCAGTTCCAG
TACCTGGACACCGGCAAGACCCCCGGCAGCAACCAGGTCGAGGTCACCGGTCGTCCCGGCGAGGCGCCGGTGCTCGTGCT
GCCCGAGGGCCGGTCCGTCCGGTTCGTGCTGACGTCACCGGACGTGATCCACTCGTTCTGGGTGCCCGAGTTCCTGTTCA
AGCGGGACGTCGTCCCCGGGCGGGTCAACCAGTTCGAGCTCACCGCCACGAAGACCGGGACGTTCGTCGGGCGATGCGCC
GAGCTGTGCGGCACCGACCACGACCGGATGACGTTCTACGTCAAGGTCGTGCCGGGCGCCGAGTACGACCGCTTCATCGA
GGAACGGGAGAGCGCCGCGATCAGCGCGTCGCCGTCCTCCGGCGTCACCACCGGGAGTGTCCAGTGA

Upstream 100 bases:

>100_bases
GTCCGCCAGCCGCGCGGCCGCTAGTCGTGGGAGGCAGGACCTGGTGAGGAGATCCTTCGGTCGGACCCGGCCGTCGCTCG
CGGATGTCGAGGACACGCCG

Downstream 100 bases:

>100_bases
CCCTTCTGCACGAGTCGCCCGCCGGGCCGGCCGGGCACGCCCATGAGCCGGTGAACCACGAGAAGCCGGCGATCGCGAAC
CTGCTCGGATACCTGAGGAC

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II [H]

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MAPADTADADADASPSRRVGHRRPRRRRVNARLGATLVAVGLLATACDVPNFGFPDGVTNHTPRILNMWQGSVIAALAVG
VFVWALIFYAVVVFRKRSDVLPRQVRYNLPVEILYTVVPVVIVAGLFYYTARDESEITKLSDKPDVTVNVIGFRWNWQFQ
YLDTGKTPGSNQVEVTGRPGEAPVLVLPEGRSVRFVLTSPDVIHSFWVPEFLFKRDVVPGRVNQFELTATKTGTFVGRCA
ELCGTDHDRMTFYVKVVPGAEYDRFIEERESAAISASPSSGVTTGSVQ

Sequences:

>Translated_288_residues
MAPADTADADADASPSRRVGHRRPRRRRVNARLGATLVAVGLLATACDVPNFGFPDGVTNHTPRILNMWQGSVIAALAVG
VFVWALIFYAVVVFRKRSDVLPRQVRYNLPVEILYTVVPVVIVAGLFYYTARDESEITKLSDKPDVTVNVIGFRWNWQFQ
YLDTGKTPGSNQVEVTGRPGEAPVLVLPEGRSVRFVLTSPDVIHSFWVPEFLFKRDVVPGRVNQFELTATKTGTFVGRCA
ELCGTDHDRMTFYVKVVPGAEYDRFIEERESAAISASPSSGVTTGSVQ
>Mature_287_residues
APADTADADADASPSRRVGHRRPRRRRVNARLGATLVAVGLLATACDVPNFGFPDGVTNHTPRILNMWQGSVIAALAVGV
FVWALIFYAVVVFRKRSDVLPRQVRYNLPVEILYTVVPVVIVAGLFYYTARDESEITKLSDKPDVTVNVIGFRWNWQFQY
LDTGKTPGSNQVEVTGRPGEAPVLVLPEGRSVRFVLTSPDVIHSFWVPEFLFKRDVVPGRVNQFELTATKTGTFVGRCAE
LCGTDHDRMTFYVKVVPGAEYDRFIEERESAAISASPSSGVTTGSVQ

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=156, Percent_Identity=31.4102564102564, Blast_Score=94, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6226540, Length=233, Percent_Identity=27.0386266094421, Blast_Score=99, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 31790; Mature: 31658

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPADTADADADASPSRRVGHRRPRRRRVNARLGATLVAVGLLATACDVPNFGFPDGVTN
CCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
HTPRILNMWQGSVIAALAVGVFVWALIFYAVVVFRKRSDVLPRQVRYNLPVEILYTVVPV
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHH
VIVAGLFYYTARDESEITKLSDKPDVTVNVIGFRWNWQFQYLDTGKTPGSNQVEVTGRPG
HHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEEEEECCCC
EAPVLVLPEGRSVRFVLTSPDVIHSFWVPEFLFKRDVVPGRVNQFELTATKTGTFVGRCA
CCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHH
ELCGTDHDRMTFYVKVVPGAEYDRFIEERESAAISASPSSGVTTGSVQ
HHHCCCCCCEEEEEEEECCCHHHHHHHHHHCCEEECCCCCCCCCCCCC
>Mature Secondary Structure 
APADTADADADASPSRRVGHRRPRRRRVNARLGATLVAVGLLATACDVPNFGFPDGVTN
CCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
HTPRILNMWQGSVIAALAVGVFVWALIFYAVVVFRKRSDVLPRQVRYNLPVEILYTVVPV
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHH
VIVAGLFYYTARDESEITKLSDKPDVTVNVIGFRWNWQFQYLDTGKTPGSNQVEVTGRPG
HHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEEEEECCCC
EAPVLVLPEGRSVRFVLTSPDVIHSFWVPEFLFKRDVVPGRVNQFELTATKTGTFVGRCA
CCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHH
ELCGTDHDRMTFYVKVVPGAEYDRFIEERESAAISASPSSGVTTGSVQ
HHHCCCCCCEEEEEEEECCCHHHHHHHHHHCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]