Click here to switch to the map view.

The map label for this gene is 158313624

Identifier: 158313624

GI number: 158313624

Start: 2152877

End: 2153536

Strand: Direct

Name: 158313624

Synonym: Franean1_1788

Alternate gene names: NA

Gene position: 2152877-2153536 (Clockwise)

Preceding gene: 158313622

Following gene: 158313627

Centisome position: 23.97

GC content: 74.85

Gene sequence:

>660_bases
ATGAGCCTTCCGGCCGACCAGCACGCGGACGGGAGCGATCCAGCCCGGCAGACGCGCCGCTACGACAGCCCGGTGCGCCG
GGCGCAGACCGCGCAGACGCGGGAGCGCATAGTCGCCGCCGGGACGGCGCTGGTCCACTCGTTCCCGACCTGGGACTGGC
GAGGCCTGACGTTCCGCGCGGTCGCCGAGCGCGCCGGCGTGAGCAAGCGGACCGTGCACCGCTACTTCGCCACCGAGAGC
GAGCTGCACGACGCCATCCTTCGCAACCTCGAGAAGGAGGCCGGGGTCGTCTACGAAGGCCTCGACCTGGACAACCTCGC
CGACACCGCGGCCGGCGGGCTGGCGACCCTGGACCGCTTCGCCGCCTCGCCGGGCCTGAGCGGGGAAGCCGTCGAGCCCA
CCCTCGCCGCCGACCGCCGCCGGCGCGAGGCGCTCGCCCGCGCGGTCGCCCCGCCGACGGCGGAATGGACCGACACCCAG
CGGCGGATGGCGGCCGCGATCCTGGACATCCTCTGGACCGGGCACGTCTACGAACGGCTGGTCACCGCCTGGAAGCTCGA
CCTGGATGCGGCGACGGGCGCGGTCACCTGGGCACTGGACCTGCTGGCGGACGGCATCCGCGAGGACCACCGGCCGCAGC
CGCGACCGCCCGCGCGGTAA

Upstream 100 bases:

>100_bases
TAATTGGACCGTCAACCGGCTTGCGTCGCTCCCGCCATCCCCGCCACTCCCACCGCCCAGCATCCGGTCCCGCCCCGGCG
CGACAGCCCGAGGAGCCGCT

Downstream 100 bases:

>100_bases
CCCGGCTGGGTCAGGCGGGCCGCAGCCGGGTGGCCAGGCCGGCGACGGCCAGCCACACCTCGTCGGACTCGGCGGCGAGC
CGTGCGTTGACCTGACCGAG

Product: regulatory protein TetR

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSLPADQHADGSDPARQTRRYDSPVRRAQTAQTRERIVAAGTALVHSFPTWDWRGLTFRAVAERAGVSKRTVHRYFATES
ELHDAILRNLEKEAGVVYEGLDLDNLADTAAGGLATLDRFAASPGLSGEAVEPTLAADRRRREALARAVAPPTAEWTDTQ
RRMAAAILDILWTGHVYERLVTAWKLDLDAATGAVTWALDLLADGIREDHRPQPRPPAR

Sequences:

>Translated_219_residues
MSLPADQHADGSDPARQTRRYDSPVRRAQTAQTRERIVAAGTALVHSFPTWDWRGLTFRAVAERAGVSKRTVHRYFATES
ELHDAILRNLEKEAGVVYEGLDLDNLADTAAGGLATLDRFAASPGLSGEAVEPTLAADRRRREALARAVAPPTAEWTDTQ
RRMAAAILDILWTGHVYERLVTAWKLDLDAATGAVTWALDLLADGIREDHRPQPRPPAR
>Mature_218_residues
SLPADQHADGSDPARQTRRYDSPVRRAQTAQTRERIVAAGTALVHSFPTWDWRGLTFRAVAERAGVSKRTVHRYFATESE
LHDAILRNLEKEAGVVYEGLDLDNLADTAAGGLATLDRFAASPGLSGEAVEPTLAADRRRREALARAVAPPTAEWTDTQR
RMAAAILDILWTGHVYERLVTAWKLDLDAATGAVTWALDLLADGIREDHRPQPRPPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24123; Mature: 23992

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPADQHADGSDPARQTRRYDSPVRRAQTAQTRERIVAAGTALVHSFPTWDWRGLTFRA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
VAERAGVSKRTVHRYFATESELHDAILRNLEKEAGVVYEGLDLDNLADTAAGGLATLDRF
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCHHHHHHHH
AASPGLSGEAVEPTLAADRRRREALARAVAPPTAEWTDTQRRMAAAILDILWTGHVYERL
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VTAWKLDLDAATGAVTWALDLLADGIREDHRPQPRPPAR
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SLPADQHADGSDPARQTRRYDSPVRRAQTAQTRERIVAAGTALVHSFPTWDWRGLTFRA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
VAERAGVSKRTVHRYFATESELHDAILRNLEKEAGVVYEGLDLDNLADTAAGGLATLDRF
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCHHHHHHHH
AASPGLSGEAVEPTLAADRRRREALARAVAPPTAEWTDTQRRMAAAILDILWTGHVYERL
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VTAWKLDLDAATGAVTWALDLLADGIREDHRPQPRPPAR
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA