| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313604
Identifier: 158313604
GI number: 158313604
Start: 2123879
End: 2125657
Strand: Direct
Name: 158313604
Synonym: Franean1_1768
Alternate gene names: NA
Gene position: 2123879-2125657 (Clockwise)
Preceding gene: 158313603
Following gene: 158313607
Centisome position: 23.65
GC content: 67.17
Gene sequence:
>1779_bases GTGTCGCACGCGCCGCACAATATCGACACGCTGACAGCCGCCTACTTTACCCGCCCCACCGACCTTCCGTTCTCCCCGCC TCCTGGAGAAACCGCGCCGGAGCAGTGGGCGCCACGGGATCTGGGGCCGAACGACGTCGAGGCATTCATCGATGGTCTAG CCTATTTCACCGCCGTCGAGAACGAGATCGACCAGCTCATCGCCGGTCCGGTCGGCGCGGGGTTCTTCTACTGCACGGCG TGGTGGCTCGGCCTGGTCTCGACGCCGGCGACGGTGCGGATCCGCTCGTTCGACAAGTCGATCGGAAAGATCGCCGCGAC AGTGGGGATCGACCTCCAGGACGAATTTACCCGAAATCTGGGCCAGGACGAGTTCAAACTACCCAGCGGCACCCCGCTGC GATCGAAGCTCGCCCAGCTCATCGGTCGGAAGGTGGATGTCCGGATCCTGGCCTGGACGTCGCCCTTCGCGCCGAAGTAC AAGCCGGTGGCCGACCTGCTGGGAGGCCTGACCGACCTCAATCTCCACACCATCCTCAGCGTTGACTCGCTGCGGCGGAT CTACGGGCCCGCCGGCCAGAACAAGATCCTGCTCAACACGTGCGCGCATCCGCTGGGGGCCGCCCACGCCAAGATGATCG TGTGCGGCAGCGCGAATCGGCTCGCCGCTTTCACCGGCGGGCTCGACGCGGCACCCGGCAGAATGATGCCGGTGCCCTGG GCGCTGGCGAGTCCGACCCGTGGCTGGCACGACGTGGCGGTCCGGGTCCAGGGCCCGGCGGCCGGGGCGATGCACAACTT CTTCCGCAGTCTGTGGAATGAGCAGCTCAAACAGCCGATCGACACGTTCGTCCTCGACGACCAGCAGATTCCCACGCATT TCGCGGACTCGCCCCCGGTTCCGGCCGCCCCGGCGCCGCCGGCCGTCGTCGGACCGCGCCAGCGGGTTCAGGTCCTGCGG ACGGTGCCGCAGATGAAGTTCTCGGCGGCCGGCCCGGAAAGGCTTGGCCCGTCCGCCGCGCAGCGATGGCTTCTCACCAC CGCGGCCGGGTTCAGGCGAGCGCCCATCACCTTCGCCCCGGATGGAATCTTCGAGTTTCACGTAGCGCTGCGAAAGGCGA TTTCACAGGCCACCCGGTACATTTTCATCGCCGACCAGGCATTCTCCTCGCAGGAGGTGATGGGCTGGCTCAACGCCAGA CTCATCCAGCAGCCGGGCCTGAAAGTGATCCTGGTGCACGGCGCCGACCCCGCCGACCCGCCGTCCGGGCTGCTGAACCA CGCCGTCAACAACTTCCTGCTGCCCCACCTGCCGGGAGTCGGTGGAAACCCGAACAATGTGATGGTCTGTGGCTGGGCTG GCGTCACGGTCCACAGCAAGGTTGTCATCATCGATGACCAGTGGTGTGCGGTCGGCTCGGCGAACTGTATGCGCCGCAGC CATTTCACGGATATCGAGCTGTCGATCGCCGTGCTTGACGAGGACGAGCCTGGTTTCGCTCAGCGGCTTCGCCGGGACCT CTGGGCGCGGTACTGCGGCGTGCCGCTGCCGGGGGAGTCGATCGTCTTCTCCTACGACGACGAACTCACCGCCCTGCTCG ACCTCAACCGGGCGCTGGGGATCTGGAAGCCGGCGTGGGGGTCCGGGGCGGCGCTGCCGATGGCCGCGCACCTGCTCGGC TCGGTCCAGCCGTACCCGCTGCCCATGCCCGCGCCCACGATCGCCTACAGCGAGGCGGCGTACGACGCGCAGGACATCGA CTCGCGCAAGGTTGTCTGA
Upstream 100 bases:
>100_bases CATTCGGGAGGGACGGGGGACCCTGGCAGATATCGGCCGTTCCGAGCCGCCCTGCCGCGCCGTCGTGGTCGCCCGCCGTG TACTGCGCCGAAAGGGAATT
Downstream 100 bases:
>100_bases CCCGGGGCCGACCCGGAACCCCCGCGGCCGTCCCGGCCGCGGGGAGGCGGCCGGGGCCGCGGGAGGGTGCCGCCGCGCCG CCAGGGCGCGCTTGGAGCGG
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 592; Mature: 591
Protein sequence:
>592_residues MSHAPHNIDTLTAAYFTRPTDLPFSPPPGETAPEQWAPRDLGPNDVEAFIDGLAYFTAVENEIDQLIAGPVGAGFFYCTA WWLGLVSTPATVRIRSFDKSIGKIAATVGIDLQDEFTRNLGQDEFKLPSGTPLRSKLAQLIGRKVDVRILAWTSPFAPKY KPVADLLGGLTDLNLHTILSVDSLRRIYGPAGQNKILLNTCAHPLGAAHAKMIVCGSANRLAAFTGGLDAAPGRMMPVPW ALASPTRGWHDVAVRVQGPAAGAMHNFFRSLWNEQLKQPIDTFVLDDQQIPTHFADSPPVPAAPAPPAVVGPRQRVQVLR TVPQMKFSAAGPERLGPSAAQRWLLTTAAGFRRAPITFAPDGIFEFHVALRKAISQATRYIFIADQAFSSQEVMGWLNAR LIQQPGLKVILVHGADPADPPSGLLNHAVNNFLLPHLPGVGGNPNNVMVCGWAGVTVHSKVVIIDDQWCAVGSANCMRRS HFTDIELSIAVLDEDEPGFAQRLRRDLWARYCGVPLPGESIVFSYDDELTALLDLNRALGIWKPAWGSGAALPMAAHLLG SVQPYPLPMPAPTIAYSEAAYDAQDIDSRKVV
Sequences:
>Translated_592_residues MSHAPHNIDTLTAAYFTRPTDLPFSPPPGETAPEQWAPRDLGPNDVEAFIDGLAYFTAVENEIDQLIAGPVGAGFFYCTA WWLGLVSTPATVRIRSFDKSIGKIAATVGIDLQDEFTRNLGQDEFKLPSGTPLRSKLAQLIGRKVDVRILAWTSPFAPKY KPVADLLGGLTDLNLHTILSVDSLRRIYGPAGQNKILLNTCAHPLGAAHAKMIVCGSANRLAAFTGGLDAAPGRMMPVPW ALASPTRGWHDVAVRVQGPAAGAMHNFFRSLWNEQLKQPIDTFVLDDQQIPTHFADSPPVPAAPAPPAVVGPRQRVQVLR TVPQMKFSAAGPERLGPSAAQRWLLTTAAGFRRAPITFAPDGIFEFHVALRKAISQATRYIFIADQAFSSQEVMGWLNAR LIQQPGLKVILVHGADPADPPSGLLNHAVNNFLLPHLPGVGGNPNNVMVCGWAGVTVHSKVVIIDDQWCAVGSANCMRRS HFTDIELSIAVLDEDEPGFAQRLRRDLWARYCGVPLPGESIVFSYDDELTALLDLNRALGIWKPAWGSGAALPMAAHLLG SVQPYPLPMPAPTIAYSEAAYDAQDIDSRKVV >Mature_591_residues SHAPHNIDTLTAAYFTRPTDLPFSPPPGETAPEQWAPRDLGPNDVEAFIDGLAYFTAVENEIDQLIAGPVGAGFFYCTAW WLGLVSTPATVRIRSFDKSIGKIAATVGIDLQDEFTRNLGQDEFKLPSGTPLRSKLAQLIGRKVDVRILAWTSPFAPKYK PVADLLGGLTDLNLHTILSVDSLRRIYGPAGQNKILLNTCAHPLGAAHAKMIVCGSANRLAAFTGGLDAAPGRMMPVPWA LASPTRGWHDVAVRVQGPAAGAMHNFFRSLWNEQLKQPIDTFVLDDQQIPTHFADSPPVPAAPAPPAVVGPRQRVQVLRT VPQMKFSAAGPERLGPSAAQRWLLTTAAGFRRAPITFAPDGIFEFHVALRKAISQATRYIFIADQAFSSQEVMGWLNARL IQQPGLKVILVHGADPADPPSGLLNHAVNNFLLPHLPGVGGNPNNVMVCGWAGVTVHSKVVIIDDQWCAVGSANCMRRSH FTDIELSIAVLDEDEPGFAQRLRRDLWARYCGVPLPGESIVFSYDDELTALLDLNRALGIWKPAWGSGAALPMAAHLLGS VQPYPLPMPAPTIAYSEAAYDAQDIDSRKVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64064; Mature: 63933
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAPHNIDTLTAAYFTRPTDLPFSPPPGETAPEQWAPRDLGPNDVEAFIDGLAYFTAVE CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH NEIDQLIAGPVGAGFFYCTAWWLGLVSTPATVRIRSFDKSIGKIAATVGIDLQDEFTRNL HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHEEHHCCCCCHHHHHHCC GQDEFKLPSGTPLRSKLAQLIGRKVDVRILAWTSPFAPKYKPVADLLGGLTDLNLHTILS CCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHH VDSLRRIYGPAGQNKILLNTCAHPLGAAHAKMIVCGSANRLAAFTGGLDAAPGRMMPVPW HHHHHHHHCCCCCCEEEEHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCC ALASPTRGWHDVAVRVQGPAAGAMHNFFRSLWNEQLKQPIDTFVLDDQQIPTHFADSPPV CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCCCCCCC PAAPAPPAVVGPRQRVQVLRTVPQMKFSAAGPERLGPSAAQRWLLTTAAGFRRAPITFAP CCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCEECC DGIFEFHVALRKAISQATRYIFIADQAFSSQEVMGWLNARLIQQPGLKVILVHGADPADP CCHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC PSGLLNHAVNNFLLPHLPGVGGNPNNVMVCGWAGVTVHSKVVIIDDQWCAVGSANCMRRS HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHC HFTDIELSIAVLDEDEPGFAQRLRRDLWARYCGVPLPGESIVFSYDDELTALLDLNRALG CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHC IWKPAWGSGAALPMAAHLLGSVQPYPLPMPAPTIAYSEAAYDAQDIDSRKVV CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEECHHCCCHHCCCCCCCC >Mature Secondary Structure SHAPHNIDTLTAAYFTRPTDLPFSPPPGETAPEQWAPRDLGPNDVEAFIDGLAYFTAVE CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH NEIDQLIAGPVGAGFFYCTAWWLGLVSTPATVRIRSFDKSIGKIAATVGIDLQDEFTRNL HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHEEHHCCCCCHHHHHHCC GQDEFKLPSGTPLRSKLAQLIGRKVDVRILAWTSPFAPKYKPVADLLGGLTDLNLHTILS CCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHH VDSLRRIYGPAGQNKILLNTCAHPLGAAHAKMIVCGSANRLAAFTGGLDAAPGRMMPVPW HHHHHHHHCCCCCCEEEEHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCC ALASPTRGWHDVAVRVQGPAAGAMHNFFRSLWNEQLKQPIDTFVLDDQQIPTHFADSPPV CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCCCCCCC PAAPAPPAVVGPRQRVQVLRTVPQMKFSAAGPERLGPSAAQRWLLTTAAGFRRAPITFAP CCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCEECC DGIFEFHVALRKAISQATRYIFIADQAFSSQEVMGWLNARLIQQPGLKVILVHGADPADP CCHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC PSGLLNHAVNNFLLPHLPGVGGNPNNVMVCGWAGVTVHSKVVIIDDQWCAVGSANCMRRS HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHC HFTDIELSIAVLDEDEPGFAQRLRRDLWARYCGVPLPGESIVFSYDDELTALLDLNRALG CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHC IWKPAWGSGAALPMAAHLLGSVQPYPLPMPAPTIAYSEAAYDAQDIDSRKVV CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEECHHCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA