| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is glnA [H]
Identifier: 158313602
GI number: 158313602
Start: 2118874
End: 2120232
Strand: Direct
Name: glnA [H]
Synonym: Franean1_1766
Alternate gene names: 158313602
Gene position: 2118874-2120232 (Clockwise)
Preceding gene: 158313600
Following gene: 158313603
Centisome position: 23.59
GC content: 68.95
Gene sequence:
>1359_bases ATGGACAAACAACAGGAATTCGTTCTTCGCACCCTCGAGGAACGCGACATCCGGTTCGTCCGGCTCTGGTTCACCGACGT CCTGGGGGTGCTGAAGTCGGTCGAGATCGCGCCGGCCGAGCTGGAGGGCGCGCTCGCCGAGGGCATCGGCTTCGACGGCT CCGCGATCGAGGGCTTCGCGCGGGTGCACGAGGCGGACATGCTCGCCCGGCCCGACCCGTCCACCTTCCAGGTGCTGCCG TGGCGCGGCGAGCACCCGATGACCGCCCGCATGTTCTGCGACCTGGTCATGCCGGACGGGACGCCCGCGGTCGCGGACTC CCGCTGGGTGCTGCGCCGCACCCTGGCGAGGGCGGCCGACGCCGGGTTCACCTTCTACACCCATCCCGAGATCGAGTTCT TCCTGCTCAAGCACCCGCCGACGCGCGGCGGCCCGATGCCGCCGCCGGTGGACGAGTCGGGCTACTTCGACCTGACCCCG AACGACATCAGCCACGACTTCCGCCAGCAGGCCATCGGCGTGCTGGAACGGCTCGGTATCTCGGTGGAGTTCAGCCATCA CGAGGTCGCCCCGGGCCAGCAGGAGATCGACCTGCGCTACGCCGACGCGCTCACCATCGCCGACAACATCATGACCTTCC GGCAGGTGGTGAAGGAGGTGGCGCTGCGCCAGGGCATCTACGCGACGTTCATGCCCAAGCCGTTCAGCGACCAGGCCGGG TCGGGCATGCACACCCACATGAGCCTGTTCGAGGGCGACCGCAACGCCTTCCACGACCCGACCGACGAGTACCAGCTCTC CAAGGTGGCCAAGGCGTTCATCGCCGGGCTGCTGGTGCACTCCGCTGAGATCACCGCGGTCACCAACCAGTGGGTGAACT CCTACAAGCGGCTGGTCGGAGACCAGCGCGCCGGTGAGCTGATGGAGGCGCCCGCCTACGTCTGCTGGGGCCACAACAAC CGCTCGGCGCTCGTCCGGGTGCCGCTGTACAAGCTCAACAAGTCCAACGCGGCCCGGGTCGAGTTCCGGTCGCCGGACAG CGCCTGCAACCCGTACCTGACCTTCGCGCTGATGCTCGCCGCCGGCCTGCGCGGGGTACAGGGCGGGTACGACCTCCCGG CACCGGCGGCCGACGACGTGTGGACGCTGACGGACGCGCAGCGCCGGGAGCGCGGCATCACCGCGCTGCCCGGGTCCCTC GCCGAGGCGATCGCGACCATGGAGACGTCCTCGCTCGTCCGGGAGACCCTCGGCGACGAGCTGTTCGACTTCTTCCTGCG CAACAAGCGCTCGGAGTGGATCGAGTACCGCAGGCAGGTCACGCCGTTCGAGATCGACCGGTACCTCCCGACCCTGTGA
Upstream 100 bases:
>100_bases CCGGCTCGGAGTATCGGGCGGCGGCGCATCCGGGGGAAGACCACCGGAAGATGACTCGGGGAGCCGTGCCGACGAGTCCA CACCTCAGCGCGGAGGGCTC
Downstream 100 bases:
>100_bases GGAGCCGGCGGCCGCGGGCCGCCGCTCCTCCGGAAGACGCGCCCATGCCCCACCAGACGTCCGTACCCCACCGGGTGACC GCGCCCGGCCGGCTGACCGT
Product: glutamine synthetase catalytic subunit
Products: NA
Alternate protein names: Glutamate--ammonia ligase 2 [H]
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MDKQQEFVLRTLEERDIRFVRLWFTDVLGVLKSVEIAPAELEGALAEGIGFDGSAIEGFARVHEADMLARPDPSTFQVLP WRGEHPMTARMFCDLVMPDGTPAVADSRWVLRRTLARAADAGFTFYTHPEIEFFLLKHPPTRGGPMPPPVDESGYFDLTP NDISHDFRQQAIGVLERLGISVEFSHHEVAPGQQEIDLRYADALTIADNIMTFRQVVKEVALRQGIYATFMPKPFSDQAG SGMHTHMSLFEGDRNAFHDPTDEYQLSKVAKAFIAGLLVHSAEITAVTNQWVNSYKRLVGDQRAGELMEAPAYVCWGHNN RSALVRVPLYKLNKSNAARVEFRSPDSACNPYLTFALMLAAGLRGVQGGYDLPAPAADDVWTLTDAQRRERGITALPGSL AEAIATMETSSLVRETLGDELFDFFLRNKRSEWIEYRRQVTPFEIDRYLPTL
Sequences:
>Translated_452_residues MDKQQEFVLRTLEERDIRFVRLWFTDVLGVLKSVEIAPAELEGALAEGIGFDGSAIEGFARVHEADMLARPDPSTFQVLP WRGEHPMTARMFCDLVMPDGTPAVADSRWVLRRTLARAADAGFTFYTHPEIEFFLLKHPPTRGGPMPPPVDESGYFDLTP NDISHDFRQQAIGVLERLGISVEFSHHEVAPGQQEIDLRYADALTIADNIMTFRQVVKEVALRQGIYATFMPKPFSDQAG SGMHTHMSLFEGDRNAFHDPTDEYQLSKVAKAFIAGLLVHSAEITAVTNQWVNSYKRLVGDQRAGELMEAPAYVCWGHNN RSALVRVPLYKLNKSNAARVEFRSPDSACNPYLTFALMLAAGLRGVQGGYDLPAPAADDVWTLTDAQRRERGITALPGSL AEAIATMETSSLVRETLGDELFDFFLRNKRSEWIEYRRQVTPFEIDRYLPTL >Mature_452_residues MDKQQEFVLRTLEERDIRFVRLWFTDVLGVLKSVEIAPAELEGALAEGIGFDGSAIEGFARVHEADMLARPDPSTFQVLP WRGEHPMTARMFCDLVMPDGTPAVADSRWVLRRTLARAADAGFTFYTHPEIEFFLLKHPPTRGGPMPPPVDESGYFDLTP NDISHDFRQQAIGVLERLGISVEFSHHEVAPGQQEIDLRYADALTIADNIMTFRQVVKEVALRQGIYATFMPKPFSDQAG SGMHTHMSLFEGDRNAFHDPTDEYQLSKVAKAFIAGLLVHSAEITAVTNQWVNSYKRLVGDQRAGELMEAPAYVCWGHNN RSALVRVPLYKLNKSNAARVEFRSPDSACNPYLTFALMLAAGLRGVQGGYDLPAPAADDVWTLTDAQRRERGITALPGSL AEAIATMETSSLVRETLGDELFDFFLRNKRSEWIEYRRQVTPFEIDRYLPTL
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=448, Percent_Identity=26.1160714285714, Blast_Score=137, Evalue=2e-32, Organism=Escherichia coli, GI1790301, Length=481, Percent_Identity=34.3035343035343, Blast_Score=210, Evalue=2e-55, Organism=Escherichia coli, GI87081870, Length=467, Percent_Identity=26.5524625267666, Blast_Score=127, Evalue=1e-30,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 50726; Mature: 50726
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQQEFVLRTLEERDIRFVRLWFTDVLGVLKSVEIAPAELEGALAEGIGFDGSAIEGFA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHH RVHEADMLARPDPSTFQVLPWRGEHPMTARMFCDLVMPDGTPAVADSRWVLRRTLARAAD HHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHC AGFTFYTHPEIEFFLLKHPPTRGGPMPPPVDESGYFDLTPNDISHDFRQQAIGVLERLGI CCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCC SVEFSHHEVAPGQQEIDLRYADALTIADNIMTFRQVVKEVALRQGIYATFMPKPFSDQAG EEEECCCCCCCCCHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC SGMHTHMSLFEGDRNAFHDPTDEYQLSKVAKAFIAGLLVHSAEITAVTNQWVNSYKRLVG CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DQRAGELMEAPAYVCWGHNNRSALVRVPLYKLNKSNAARVEFRSPDSACNPYLTFALMLA CHHHHHHHHCCEEEEECCCCCCEEEEECEEEECCCCCEEEEECCCCCCCCHHHHHHHHHH AGLRGVQGGYDLPAPAADDVWTLTDAQRRERGITALPGSLAEAIATMETSSLVRETLGDE HHCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LFDFFLRNKRSEWIEYRRQVTPFEIDRYLPTL HHHHHHHCCHHHHHHHHHCCCCEEHHHHCCCC >Mature Secondary Structure MDKQQEFVLRTLEERDIRFVRLWFTDVLGVLKSVEIAPAELEGALAEGIGFDGSAIEGFA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHH RVHEADMLARPDPSTFQVLPWRGEHPMTARMFCDLVMPDGTPAVADSRWVLRRTLARAAD HHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHC AGFTFYTHPEIEFFLLKHPPTRGGPMPPPVDESGYFDLTPNDISHDFRQQAIGVLERLGI CCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCC SVEFSHHEVAPGQQEIDLRYADALTIADNIMTFRQVVKEVALRQGIYATFMPKPFSDQAG EEEECCCCCCCCCHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC SGMHTHMSLFEGDRNAFHDPTDEYQLSKVAKAFIAGLLVHSAEITAVTNQWVNSYKRLVG CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DQRAGELMEAPAYVCWGHNNRSALVRVPLYKLNKSNAARVEFRSPDSACNPYLTFALMLA CHHHHHHHHCCEEEEECCCCCCEEEEECEEEECCCCCEEEEECCCCCCCCHHHHHHHHHH AGLRGVQGGYDLPAPAADDVWTLTDAQRRERGITALPGSLAEAIATMETSSLVRETLGDE HHCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LFDFFLRNKRSEWIEYRRQVTPFEIDRYLPTL HHHHHHHCCHHHHHHHHHCCCCEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA