Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is glnA [H]

Identifier: 158313602

GI number: 158313602

Start: 2118874

End: 2120232

Strand: Direct

Name: glnA [H]

Synonym: Franean1_1766

Alternate gene names: 158313602

Gene position: 2118874-2120232 (Clockwise)

Preceding gene: 158313600

Following gene: 158313603

Centisome position: 23.59

GC content: 68.95

Gene sequence:

>1359_bases
ATGGACAAACAACAGGAATTCGTTCTTCGCACCCTCGAGGAACGCGACATCCGGTTCGTCCGGCTCTGGTTCACCGACGT
CCTGGGGGTGCTGAAGTCGGTCGAGATCGCGCCGGCCGAGCTGGAGGGCGCGCTCGCCGAGGGCATCGGCTTCGACGGCT
CCGCGATCGAGGGCTTCGCGCGGGTGCACGAGGCGGACATGCTCGCCCGGCCCGACCCGTCCACCTTCCAGGTGCTGCCG
TGGCGCGGCGAGCACCCGATGACCGCCCGCATGTTCTGCGACCTGGTCATGCCGGACGGGACGCCCGCGGTCGCGGACTC
CCGCTGGGTGCTGCGCCGCACCCTGGCGAGGGCGGCCGACGCCGGGTTCACCTTCTACACCCATCCCGAGATCGAGTTCT
TCCTGCTCAAGCACCCGCCGACGCGCGGCGGCCCGATGCCGCCGCCGGTGGACGAGTCGGGCTACTTCGACCTGACCCCG
AACGACATCAGCCACGACTTCCGCCAGCAGGCCATCGGCGTGCTGGAACGGCTCGGTATCTCGGTGGAGTTCAGCCATCA
CGAGGTCGCCCCGGGCCAGCAGGAGATCGACCTGCGCTACGCCGACGCGCTCACCATCGCCGACAACATCATGACCTTCC
GGCAGGTGGTGAAGGAGGTGGCGCTGCGCCAGGGCATCTACGCGACGTTCATGCCCAAGCCGTTCAGCGACCAGGCCGGG
TCGGGCATGCACACCCACATGAGCCTGTTCGAGGGCGACCGCAACGCCTTCCACGACCCGACCGACGAGTACCAGCTCTC
CAAGGTGGCCAAGGCGTTCATCGCCGGGCTGCTGGTGCACTCCGCTGAGATCACCGCGGTCACCAACCAGTGGGTGAACT
CCTACAAGCGGCTGGTCGGAGACCAGCGCGCCGGTGAGCTGATGGAGGCGCCCGCCTACGTCTGCTGGGGCCACAACAAC
CGCTCGGCGCTCGTCCGGGTGCCGCTGTACAAGCTCAACAAGTCCAACGCGGCCCGGGTCGAGTTCCGGTCGCCGGACAG
CGCCTGCAACCCGTACCTGACCTTCGCGCTGATGCTCGCCGCCGGCCTGCGCGGGGTACAGGGCGGGTACGACCTCCCGG
CACCGGCGGCCGACGACGTGTGGACGCTGACGGACGCGCAGCGCCGGGAGCGCGGCATCACCGCGCTGCCCGGGTCCCTC
GCCGAGGCGATCGCGACCATGGAGACGTCCTCGCTCGTCCGGGAGACCCTCGGCGACGAGCTGTTCGACTTCTTCCTGCG
CAACAAGCGCTCGGAGTGGATCGAGTACCGCAGGCAGGTCACGCCGTTCGAGATCGACCGGTACCTCCCGACCCTGTGA

Upstream 100 bases:

>100_bases
CCGGCTCGGAGTATCGGGCGGCGGCGCATCCGGGGGAAGACCACCGGAAGATGACTCGGGGAGCCGTGCCGACGAGTCCA
CACCTCAGCGCGGAGGGCTC

Downstream 100 bases:

>100_bases
GGAGCCGGCGGCCGCGGGCCGCCGCTCCTCCGGAAGACGCGCCCATGCCCCACCAGACGTCCGTACCCCACCGGGTGACC
GCGCCCGGCCGGCTGACCGT

Product: glutamine synthetase catalytic subunit

Products: NA

Alternate protein names: Glutamate--ammonia ligase 2 [H]

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MDKQQEFVLRTLEERDIRFVRLWFTDVLGVLKSVEIAPAELEGALAEGIGFDGSAIEGFARVHEADMLARPDPSTFQVLP
WRGEHPMTARMFCDLVMPDGTPAVADSRWVLRRTLARAADAGFTFYTHPEIEFFLLKHPPTRGGPMPPPVDESGYFDLTP
NDISHDFRQQAIGVLERLGISVEFSHHEVAPGQQEIDLRYADALTIADNIMTFRQVVKEVALRQGIYATFMPKPFSDQAG
SGMHTHMSLFEGDRNAFHDPTDEYQLSKVAKAFIAGLLVHSAEITAVTNQWVNSYKRLVGDQRAGELMEAPAYVCWGHNN
RSALVRVPLYKLNKSNAARVEFRSPDSACNPYLTFALMLAAGLRGVQGGYDLPAPAADDVWTLTDAQRRERGITALPGSL
AEAIATMETSSLVRETLGDELFDFFLRNKRSEWIEYRRQVTPFEIDRYLPTL

Sequences:

>Translated_452_residues
MDKQQEFVLRTLEERDIRFVRLWFTDVLGVLKSVEIAPAELEGALAEGIGFDGSAIEGFARVHEADMLARPDPSTFQVLP
WRGEHPMTARMFCDLVMPDGTPAVADSRWVLRRTLARAADAGFTFYTHPEIEFFLLKHPPTRGGPMPPPVDESGYFDLTP
NDISHDFRQQAIGVLERLGISVEFSHHEVAPGQQEIDLRYADALTIADNIMTFRQVVKEVALRQGIYATFMPKPFSDQAG
SGMHTHMSLFEGDRNAFHDPTDEYQLSKVAKAFIAGLLVHSAEITAVTNQWVNSYKRLVGDQRAGELMEAPAYVCWGHNN
RSALVRVPLYKLNKSNAARVEFRSPDSACNPYLTFALMLAAGLRGVQGGYDLPAPAADDVWTLTDAQRRERGITALPGSL
AEAIATMETSSLVRETLGDELFDFFLRNKRSEWIEYRRQVTPFEIDRYLPTL
>Mature_452_residues
MDKQQEFVLRTLEERDIRFVRLWFTDVLGVLKSVEIAPAELEGALAEGIGFDGSAIEGFARVHEADMLARPDPSTFQVLP
WRGEHPMTARMFCDLVMPDGTPAVADSRWVLRRTLARAADAGFTFYTHPEIEFFLLKHPPTRGGPMPPPVDESGYFDLTP
NDISHDFRQQAIGVLERLGISVEFSHHEVAPGQQEIDLRYADALTIADNIMTFRQVVKEVALRQGIYATFMPKPFSDQAG
SGMHTHMSLFEGDRNAFHDPTDEYQLSKVAKAFIAGLLVHSAEITAVTNQWVNSYKRLVGDQRAGELMEAPAYVCWGHNN
RSALVRVPLYKLNKSNAARVEFRSPDSACNPYLTFALMLAAGLRGVQGGYDLPAPAADDVWTLTDAQRRERGITALPGSL
AEAIATMETSSLVRETLGDELFDFFLRNKRSEWIEYRRQVTPFEIDRYLPTL

Specific function: Unknown

COG id: COG0174

COG function: function code E; Glutamine synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine synthetase family [H]

Homologues:

Organism=Homo sapiens, GI221307485, Length=448, Percent_Identity=26.1160714285714, Blast_Score=137, Evalue=2e-32,
Organism=Escherichia coli, GI1790301, Length=481, Percent_Identity=34.3035343035343, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI87081870, Length=467, Percent_Identity=26.5524625267666, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008147
- InterPro:   IPR014746
- InterPro:   IPR008146
- InterPro:   IPR004809 [H]

Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]

EC number: =6.3.1.2 [H]

Molecular weight: Translated: 50726; Mature: 50726

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00181 GLNA_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQQEFVLRTLEERDIRFVRLWFTDVLGVLKSVEIAPAELEGALAEGIGFDGSAIEGFA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHH
RVHEADMLARPDPSTFQVLPWRGEHPMTARMFCDLVMPDGTPAVADSRWVLRRTLARAAD
HHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHC
AGFTFYTHPEIEFFLLKHPPTRGGPMPPPVDESGYFDLTPNDISHDFRQQAIGVLERLGI
CCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCC
SVEFSHHEVAPGQQEIDLRYADALTIADNIMTFRQVVKEVALRQGIYATFMPKPFSDQAG
EEEECCCCCCCCCHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
SGMHTHMSLFEGDRNAFHDPTDEYQLSKVAKAFIAGLLVHSAEITAVTNQWVNSYKRLVG
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DQRAGELMEAPAYVCWGHNNRSALVRVPLYKLNKSNAARVEFRSPDSACNPYLTFALMLA
CHHHHHHHHCCEEEEECCCCCCEEEEECEEEECCCCCEEEEECCCCCCCCHHHHHHHHHH
AGLRGVQGGYDLPAPAADDVWTLTDAQRRERGITALPGSLAEAIATMETSSLVRETLGDE
HHCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LFDFFLRNKRSEWIEYRRQVTPFEIDRYLPTL
HHHHHHHCCHHHHHHHHHCCCCEEHHHHCCCC
>Mature Secondary Structure
MDKQQEFVLRTLEERDIRFVRLWFTDVLGVLKSVEIAPAELEGALAEGIGFDGSAIEGFA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHH
RVHEADMLARPDPSTFQVLPWRGEHPMTARMFCDLVMPDGTPAVADSRWVLRRTLARAAD
HHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHC
AGFTFYTHPEIEFFLLKHPPTRGGPMPPPVDESGYFDLTPNDISHDFRQQAIGVLERLGI
CCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCC
SVEFSHHEVAPGQQEIDLRYADALTIADNIMTFRQVVKEVALRQGIYATFMPKPFSDQAG
EEEECCCCCCCCCHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
SGMHTHMSLFEGDRNAFHDPTDEYQLSKVAKAFIAGLLVHSAEITAVTNQWVNSYKRLVG
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DQRAGELMEAPAYVCWGHNNRSALVRVPLYKLNKSNAARVEFRSPDSACNPYLTFALMLA
CHHHHHHHHCCEEEEECCCCCCEEEEECEEEECCCCCEEEEECCCCCCCCHHHHHHHHHH
AGLRGVQGGYDLPAPAADDVWTLTDAQRRERGITALPGSLAEAIATMETSSLVRETLGDE
HHCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LFDFFLRNKRSEWIEYRRQVTPFEIDRYLPTL
HHHHHHHCCHHHHHHHHHCCCCEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA