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The map label for this gene is yqxC [H]

Identifier: 158313587

GI number: 158313587

Start: 2100152

End: 2101141

Strand: Direct

Name: yqxC [H]

Synonym: Franean1_1751

Alternate gene names: 158313587

Gene position: 2100152-2101141 (Clockwise)

Preceding gene: 158313585

Following gene: 158313588

Centisome position: 23.38

GC content: 76.46

Gene sequence:

>990_bases
GTGGCCCGCAGGATCCGTCTGGACGCGGAGCTCGTCCGGCGCCGGCTCGTCCCCTCCCGGGAACGGGCCGTCGAGGCGAT
CGCCGCGGGCCGCGTGCGGGTCGGCGGCGTCACCGCGACGAAGCCGGCGACGGTCGTCGACGGTGCGACGTCGATCGTGC
TCGCCGTGGACGACGACCCCGGCTATGCCTCCCGGGGAGCGCACAAGCTGGTCGGCGCGTTCGAGGCGTTCGGCGTCCCA
GCGCCCGGGACGCCCGACCTGTCCGGCGGGCCCGGCCAGCCTGATGTGCCGGATCGGCCTGGTTCGCCCGCGGCGGTGGC
GGGGCCGCCGGCGCTCGTGGTCGCCGGGCGGAGGTGCCTCGACGCCGGTGCGTCGACCGGCGGGTTCACCGACGTGCTCC
TCCGGTACGGCGCGGCGCGGGTGGTGGCCGTCGACGTCGGATACGGGCAGCTCGTCTGGCGGCTGCGCTCGGATCCGCGG
GTGCGCGTGCTGGACCGGACGAACGTCCGCAACCTCACGCCCGAGCAGGTCGGGGAGCCGGTGGAGCTGGTCGTGGGCGA
CCTCTCGTTCATCTCGTTGGTCCTGGTGCTGCCCGCGCTGCGCGCGTGCGCCGCGCCGGACGCCGACTTCGTCCTGCTGG
TCAAGCCGCAGTTCGAGGTGGGCCGGGAGTTACTCGGCTCCGGTGGTGTGGTCCGTGATGTGGCCCTGCACGCTCGGGCG
GTGCGCACCGTCGTGACCGCCGCCGAGGGGCTCGGGCTGGGGGTGCGCGGCGTGGCGGCCAGCCCGCTGCCGGGGCCCGC
CGGCAACGTCGAGTACCTCGCCTGGCTGCGCGCGGACGTCCGCCCGACTCCAGACGAGGTCGAGGCGATGATCACCACGG
CGATCGAGGCGGGGCCCGCGGGCACGGCGGCCCCCGCCCCAGCGCCGCCGCCGTCGTCCCAGGACGCCGGCCAGGACGCC
CCAGCCGACGGCGAAAGGACCGGCCGATGA

Upstream 100 bases:

>100_bases
TGGAGGAATCGTTGGAGGATCTCGCGGGCGGCTCGCCGCGCGGACCGGGCCCCGGCCCGGGCGGCGCCCGGGCCCCTCGG
TGAGACGGGCGGGATCACTG

Downstream 100 bases:

>100_bases
CCCGCGAGGTGCTCGTCGTCAGCCACCCGCGCCGTTCCGTTGTACGGGAGAGCGCGCAGCGCGTGCTGGAGATGCTCGTG
GCCGCCGGTGTCTCCCCGCG

Product: hemolysin A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MARRIRLDAELVRRRLVPSRERAVEAIAAGRVRVGGVTATKPATVVDGATSIVLAVDDDPGYASRGAHKLVGAFEAFGVP
APGTPDLSGGPGQPDVPDRPGSPAAVAGPPALVVAGRRCLDAGASTGGFTDVLLRYGAARVVAVDVGYGQLVWRLRSDPR
VRVLDRTNVRNLTPEQVGEPVELVVGDLSFISLVLVLPALRACAAPDADFVLLVKPQFEVGRELLGSGGVVRDVALHARA
VRTVVTAAEGLGLGVRGVAASPLPGPAGNVEYLAWLRADVRPTPDEVEAMITTAIEAGPAGTAAPAPAPPPSSQDAGQDA
PADGERTGR

Sequences:

>Translated_329_residues
MARRIRLDAELVRRRLVPSRERAVEAIAAGRVRVGGVTATKPATVVDGATSIVLAVDDDPGYASRGAHKLVGAFEAFGVP
APGTPDLSGGPGQPDVPDRPGSPAAVAGPPALVVAGRRCLDAGASTGGFTDVLLRYGAARVVAVDVGYGQLVWRLRSDPR
VRVLDRTNVRNLTPEQVGEPVELVVGDLSFISLVLVLPALRACAAPDADFVLLVKPQFEVGRELLGSGGVVRDVALHARA
VRTVVTAAEGLGLGVRGVAASPLPGPAGNVEYLAWLRADVRPTPDEVEAMITTAIEAGPAGTAAPAPAPPPSSQDAGQDA
PADGERTGR
>Mature_328_residues
ARRIRLDAELVRRRLVPSRERAVEAIAAGRVRVGGVTATKPATVVDGATSIVLAVDDDPGYASRGAHKLVGAFEAFGVPA
PGTPDLSGGPGQPDVPDRPGSPAAVAGPPALVVAGRRCLDAGASTGGFTDVLLRYGAARVVAVDVGYGQLVWRLRSDPRV
RVLDRTNVRNLTPEQVGEPVELVVGDLSFISLVLVLPALRACAAPDADFVLLVKPQFEVGRELLGSGGVVRDVALHARAV
RTVVTAAEGLGLGVRGVAASPLPGPAGNVEYLAWLRADVRPTPDEVEAMITTAIEAGPAGTAAPAPAPPPSSQDAGQDAP
ADGERTGR

Specific function: Unknown

COG id: COG1189

COG function: function code J; Predicted rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004538
- InterPro:   IPR002877
- InterPro:   IPR002942 [H]

Pfam domain/function: PF01728 FtsJ; PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 33720; Mature: 33589

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRIRLDAELVRRRLVPSRERAVEAIAAGRVRVGGVTATKPATVVDGATSIVLAVDDDP
CCCEEECCHHHHHHHCCCCHHHHHHHHHHCCEEECCEECCCCCEEECCCEEEEEEEECCC
GYASRGAHKLVGAFEAFGVPAPGTPDLSGGPGQPDVPDRPGSPAAVAGPPALVVAGRRCL
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHH
DAGASTGGFTDVLLRYGAARVVAVDVGYGQLVWRLRSDPRVRVLDRTNVRNLTPEQVGEP
HCCCCCCCHHHHHHHCCCCEEEEEECCCHHEEEEECCCCCEEEEECCCCCCCCHHHHCCC
VELVVGDLSFISLVLVLPALRACAAPDADFVLLVKPQFEVGRELLGSGGVVRDVALHARA
CEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHH
VRTVVTAAEGLGLGVRGVAASPLPGPAGNVEYLAWLRADVRPTPDEVEAMITTAIEAGPA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHCCCC
GTAAPAPAPPPSSQDAGQDAPADGERTGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARRIRLDAELVRRRLVPSRERAVEAIAAGRVRVGGVTATKPATVVDGATSIVLAVDDDP
CCEEECCHHHHHHHCCCCHHHHHHHHHHCCEEECCEECCCCCEEECCCEEEEEEEECCC
GYASRGAHKLVGAFEAFGVPAPGTPDLSGGPGQPDVPDRPGSPAAVAGPPALVVAGRRCL
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHH
DAGASTGGFTDVLLRYGAARVVAVDVGYGQLVWRLRSDPRVRVLDRTNVRNLTPEQVGEP
HCCCCCCCHHHHHHHCCCCEEEEEECCCHHEEEEECCCCCEEEEECCCCCCCCHHHHCCC
VELVVGDLSFISLVLVLPALRACAAPDADFVLLVKPQFEVGRELLGSGGVVRDVALHARA
CEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHH
VRTVVTAAEGLGLGVRGVAASPLPGPAGNVEYLAWLRADVRPTPDEVEAMITTAIEAGPA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHCCCC
GTAAPAPAPPPSSQDAGQDAPADGERTGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 2507400 [H]