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The map label for this gene is rpe [H]

Identifier: 158313557

GI number: 158313557

Start: 2058009

End: 2058773

Strand: Direct

Name: rpe [H]

Synonym: Franean1_1721

Alternate gene names: 158313557

Gene position: 2058009-2058773 (Clockwise)

Preceding gene: 158313556

Following gene: 158313558

Centisome position: 22.91

GC content: 74.51

Gene sequence:

>765_bases
ATGCTGGCCGCCGACTTCGGCCGGATCGCGGACGCGGCGCGCGCCGTGGCCGGGCACGCGGACTGGCTGCACGTCGATGT
CATGGACTACCACTTCGTGCCCAACCTGGCGTTCTCCCCGGACACGGTGGACGCTCTGCGCCGGGTCACCGACACCCCGC
TCGACTGCCACCTGATGATCGAGAACCCCGACCGCTGGGCGCCCGGCTTCGCCGAGCGGGGCGCGGCGAACGTGACGATC
CACGCCGAGGCGGTCGGCGACATCGCGCGCACCACCGACGCGATCCGCGCGGCCGGTGCCCGCACCGGCCTGGCCGTCAA
GCCGGCTACCCCCGTCGAGCACTACCTGGACGATCTGCATCGCTTCGACCTGCTGCTGCTGATGACCATCGAGCCGGGCT
TCGGCGGCCAGAAGTTCATGGACGAGGTCCTGCCCAAGATCGCCGCGGCCCGTCGCCTGATCGACGAGCGCGGCCTGGAC
CTGTGGCTCCAGATCGACGGCGGGGTCAACCGGGAGACCATCGAGCGCTCCGCCGAGGCGGGGGTGGACGTCTTCGTCGC
CGGCACGGCGGTCTTCGGCCTGGACGACCCGGCGGCGGCGGTCGAGTCCCTGCGCGCGCTCGCGCTGGCGGCCGCGCCGA
GGCTCACCGCCCCGGCCGCCGCTTTTGTCTCGCCCCCTGCCCCGGCCCCCGCTCCGGCCCCGGCTCCCGTCGCTGATCGT
GAGGCGGGTGGCGGGGCGGCCGCCGTCGGCGGGGTGCCGGCGTGA

Upstream 100 bases:

>100_bases
GCACCGACGCGATGTTCCTGGCGCTGCTGCGCCGGGCGGACCGCTGACCGGCGAGGCTGGATACGCTCGCCGCGTGGCAA
CCGCGCAGATATATCCCAGC

Downstream 100 bases:

>100_bases
GCGAGGCACGCGCCGCGGCCGGCGGGCCGCCACTGCCCGGTACCCCGGAAGGCGACCGGCACTGGCTGGGCCGGGCCGTC
GAGCTGGGCCGGCGCTGCCC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLAADFGRIADAARAVAGHADWLHVDVMDYHFVPNLAFSPDTVDALRRVTDTPLDCHLMIENPDRWAPGFAERGAANVTI
HAEAVGDIARTTDAIRAAGARTGLAVKPATPVEHYLDDLHRFDLLLLMTIEPGFGGQKFMDEVLPKIAAARRLIDERGLD
LWLQIDGGVNRETIERSAEAGVDVFVAGTAVFGLDDPAAAVESLRALALAAAPRLTAPAAAFVSPPAPAPAPAPAPVADR
EAGGGAAAVGGVPA

Sequences:

>Translated_254_residues
MLAADFGRIADAARAVAGHADWLHVDVMDYHFVPNLAFSPDTVDALRRVTDTPLDCHLMIENPDRWAPGFAERGAANVTI
HAEAVGDIARTTDAIRAAGARTGLAVKPATPVEHYLDDLHRFDLLLLMTIEPGFGGQKFMDEVLPKIAAARRLIDERGLD
LWLQIDGGVNRETIERSAEAGVDVFVAGTAVFGLDDPAAAVESLRALALAAAPRLTAPAAAFVSPPAPAPAPAPAPVADR
EAGGGAAAVGGVPA
>Mature_254_residues
MLAADFGRIADAARAVAGHADWLHVDVMDYHFVPNLAFSPDTVDALRRVTDTPLDCHLMIENPDRWAPGFAERGAANVTI
HAEAVGDIARTTDAIRAAGARTGLAVKPATPVEHYLDDLHRFDLLLLMTIEPGFGGQKFMDEVLPKIAAARRLIDERGLD
LWLQIDGGVNRETIERSAEAGVDVFVAGTAVFGLDDPAAAVESLRALALAAAPRLTAPAAAFVSPPAPAPAPAPAPVADR
EAGGGAAAVGGVPA

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=217, Percent_Identity=37.3271889400922, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI219879828, Length=217, Percent_Identity=35.9447004608295, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI24307923, Length=176, Percent_Identity=33.5227272727273, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1789788, Length=209, Percent_Identity=44.0191387559809, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1790523, Length=191, Percent_Identity=37.17277486911, Blast_Score=151, Evalue=3e-38,
Organism=Escherichia coli, GI1790754, Length=185, Percent_Identity=33.5135135135135, Blast_Score=94, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17552948, Length=220, Percent_Identity=42.2727272727273, Blast_Score=171, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6322341, Length=219, Percent_Identity=38.3561643835616, Blast_Score=166, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24586301, Length=207, Percent_Identity=39.1304347826087, Blast_Score=154, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 26484; Mature: 26484

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAADFGRIADAARAVAGHADWLHVDVMDYHFVPNLAFSPDTVDALRRVTDTPLDCHLMI
CCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEE
ENPDRWAPGFAERGAANVTIHAEAVGDIARTTDAIRAAGARTGLAVKPATPVEHYLDDLH
ECCCCCCCCHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHH
RFDLLLLMTIEPGFGGQKFMDEVLPKIAAARRLIDERGLDLWLQIDGGVNRETIERSAEA
HHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHC
GVDVFVAGTAVFGLDDPAAAVESLRALALAAAPRLTAPAAAFVSPPAPAPAPAPAPVADR
CCEEEEECEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
EAGGGAAAVGGVPA
CCCCCEECCCCCCC
>Mature Secondary Structure
MLAADFGRIADAARAVAGHADWLHVDVMDYHFVPNLAFSPDTVDALRRVTDTPLDCHLMI
CCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEE
ENPDRWAPGFAERGAANVTIHAEAVGDIARTTDAIRAAGARTGLAVKPATPVEHYLDDLH
ECCCCCCCCHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHH
RFDLLLLMTIEPGFGGQKFMDEVLPKIAAARRLIDERGLDLWLQIDGGVNRETIERSAEA
HHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHC
GVDVFVAGTAVFGLDDPAAAVESLRALALAAAPRLTAPAAAFVSPPAPAPAPAPAPVADR
CCEEEEECEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
EAGGGAAAVGGVPA
CCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]