| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313544
Identifier: 158313544
GI number: 158313544
Start: 2039887
End: 2041662
Strand: Direct
Name: 158313544
Synonym: Franean1_1708
Alternate gene names: NA
Gene position: 2039887-2041662 (Clockwise)
Preceding gene: 158313543
Following gene: 158313545
Centisome position: 22.71
GC content: 77.14
Gene sequence:
>1776_bases ATGACCTCCGCCTCACGATCCACATCCCTGCCGGGGATTACCCCGTTCGCGCTGGCCGGCCCCGTGCTGGCCGCCGGTGG CAAGGATCAGACGGGCCTGCACCTGCTCCTCGCCTTCGGCCTGTTGCTGCTGGTCGTGGCAGTCGTGGGCGCGATGCGAC GGGCCTGGCGCGGCCGTGCGCAACAGCAGGAGGAGAACCTGCCGGACCTGCCCGAGCCGCCGGAGCAGACCGGGAACGTG CTGGCCGCCCCGCTGCGTGGGCGCTACCTCGGCACGGTGGACGCCGGCCACTGGCGGGAGTGGATCGCCGCGCGCGGCCT GGCCGGGCACGACGGCGACTACATCGCCGTCTACGAGCTTGGAGTGCGGGTCGACCGGGACGGCGAGGCGTTCTGGATCC CCCGGGAGGCCGTGCGGGGCGCCCGCCTCGAGCGGGCGCACGCCGGGAAGGTCGCCGCGCCGAGCCGGCTGATCGTGGTC GCGTGGTCGTTCGAGGGCCGGGAGCTGGAGGCCGGCTTCCGCGGCGAGGACCGGGCCCGCCAGCCGAAGGTCGTCCGCTC CGTGCACGACCTCATCGGGCCGGCGCCCGCCCAGCCGATGTCCGGCGACATCACCTCGCCGCACGCCCTGCCCCGGCCGC GCAACCGGCTGCGGCCCCGCGTGCCGGCGCCGGCACGCCCGGCCGAGCCCGGCGCGCCGGCCGCCGCGGCCCCCGCCCGC GGGCAGCGTCATGATCTCGCCGCGGTGGCCCCGGGCGGGCCCGCGACGATGCCGATCCCGGTCAACGGCCGCCAGCCCCG GTCGGAGCGGGCCGGGTGGCGCCGCGGTGGCGCCGCGGCCAGTCAGGGCGCCGCCGCCGAGACCCACGCCGGCCAGCGCG GATACAGCGCGGACGCGCCCGGCCCGGTCGCCTCCGGCGGCTACGACACCGCTGCCCACGGGACGGGTGCCCTTAGGACG GGTGCCCAGGACACGGGCGCCTACGACATCCGCGCCCACGTCACCGGCGCGCACAGCATCAGTACCGACAGTACCGGCGT CCACGGCACCGGCGCCCACGGCGCCAGTGCGTACGACACCGGTGCGTACGACACCGGCTCCCACGGTGCTGGCGGGTACG GGACGGGCTCGCACCGGACGGGTGCGTACGACACCGGCGGTTACCGGCCAGGTGCCCACGACGTGGGCGCCCAGGGCTCC CAGGCCGTGAGCGGCGGGACGGCCGGCTACGACACCGCCGGCTACAGCACAGCCGGCTATGACACGGCCGGGTACGGGAC TGACAGCTACGACCTGCGTCGCCAGGGCACCGGCGGGCTGGACGCGCGCGGCCACGCCACCGGCGGGTACGGGCGCCCCG GCGCCCCCGGGCCGGCCGCTCCCGACCAGGGGGGGCTCGATTCGGCCGCGTACCACCTGGGTGCCGGCGACACCGGCGTC CACGGCTCGGGTGCCTACGGCTCGGGTGCCTACGGCTCGGGTGCCTACGGCTCCGGTGCCAACGACACGGGTGCCCACGA CTCGCGTGGATACGGCCAGGGCGCATACGGCCAGGGCCGGCGCGACCCGGGCGGACGTGACCAGGGTGGATACGACCGGG AGGCGTACGCCTCCCGCGGCCGGGCCGGCACGCCGCCGGCCGTCGGCGCGCCGGGTGACCAAGGGAACTACTGGCGGACC GGCGCCGACCCGGCGGAGCGGCCGCGAGACCAGGGGACCGACGCGTTCACCGCACCGCCCGGTGAGGCCTCGTACCGACG GGAGGAGTACCCGTGA
Upstream 100 bases:
>100_bases GCCGGAGCAGCAACACTCCGTACGGTGGCCGCACGCTGCCCGGTGCCATTCGGGCGACGTTCCTGCGAGGCCGGCCCACC GTGCTCGACGGGAAGATCAT
Downstream 100 bases:
>100_bases CAGCGGCGCCCTGGCGGTCTGCCAGGGGTGGAGGGGGCCTGGCCGGCAGCCGGGCACGACGGATCGATGCGGGGGTGAGC CGGTGACCGGCTTGGACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MTSASRSTSLPGITPFALAGPVLAAGGKDQTGLHLLLAFGLLLLVVAVVGAMRRAWRGRAQQQEENLPDLPEPPEQTGNV LAAPLRGRYLGTVDAGHWREWIAARGLAGHDGDYIAVYELGVRVDRDGEAFWIPREAVRGARLERAHAGKVAAPSRLIVV AWSFEGRELEAGFRGEDRARQPKVVRSVHDLIGPAPAQPMSGDITSPHALPRPRNRLRPRVPAPARPAEPGAPAAAAPAR GQRHDLAAVAPGGPATMPIPVNGRQPRSERAGWRRGGAAASQGAAAETHAGQRGYSADAPGPVASGGYDTAAHGTGALRT GAQDTGAYDIRAHVTGAHSISTDSTGVHGTGAHGASAYDTGAYDTGSHGAGGYGTGSHRTGAYDTGGYRPGAHDVGAQGS QAVSGGTAGYDTAGYSTAGYDTAGYGTDSYDLRRQGTGGLDARGHATGGYGRPGAPGPAAPDQGGLDSAAYHLGAGDTGV HGSGAYGSGAYGSGAYGSGANDTGAHDSRGYGQGAYGQGRRDPGGRDQGGYDREAYASRGRAGTPPAVGAPGDQGNYWRT GADPAERPRDQGTDAFTAPPGEASYRREEYP
Sequences:
>Translated_591_residues MTSASRSTSLPGITPFALAGPVLAAGGKDQTGLHLLLAFGLLLLVVAVVGAMRRAWRGRAQQQEENLPDLPEPPEQTGNV LAAPLRGRYLGTVDAGHWREWIAARGLAGHDGDYIAVYELGVRVDRDGEAFWIPREAVRGARLERAHAGKVAAPSRLIVV AWSFEGRELEAGFRGEDRARQPKVVRSVHDLIGPAPAQPMSGDITSPHALPRPRNRLRPRVPAPARPAEPGAPAAAAPAR GQRHDLAAVAPGGPATMPIPVNGRQPRSERAGWRRGGAAASQGAAAETHAGQRGYSADAPGPVASGGYDTAAHGTGALRT GAQDTGAYDIRAHVTGAHSISTDSTGVHGTGAHGASAYDTGAYDTGSHGAGGYGTGSHRTGAYDTGGYRPGAHDVGAQGS QAVSGGTAGYDTAGYSTAGYDTAGYGTDSYDLRRQGTGGLDARGHATGGYGRPGAPGPAAPDQGGLDSAAYHLGAGDTGV HGSGAYGSGAYGSGAYGSGANDTGAHDSRGYGQGAYGQGRRDPGGRDQGGYDREAYASRGRAGTPPAVGAPGDQGNYWRT GADPAERPRDQGTDAFTAPPGEASYRREEYP >Mature_590_residues TSASRSTSLPGITPFALAGPVLAAGGKDQTGLHLLLAFGLLLLVVAVVGAMRRAWRGRAQQQEENLPDLPEPPEQTGNVL AAPLRGRYLGTVDAGHWREWIAARGLAGHDGDYIAVYELGVRVDRDGEAFWIPREAVRGARLERAHAGKVAAPSRLIVVA WSFEGRELEAGFRGEDRARQPKVVRSVHDLIGPAPAQPMSGDITSPHALPRPRNRLRPRVPAPARPAEPGAPAAAAPARG QRHDLAAVAPGGPATMPIPVNGRQPRSERAGWRRGGAAASQGAAAETHAGQRGYSADAPGPVASGGYDTAAHGTGALRTG AQDTGAYDIRAHVTGAHSISTDSTGVHGTGAHGASAYDTGAYDTGSHGAGGYGTGSHRTGAYDTGGYRPGAHDVGAQGSQ AVSGGTAGYDTAGYSTAGYDTAGYGTDSYDLRRQGTGGLDARGHATGGYGRPGAPGPAAPDQGGLDSAAYHLGAGDTGVH GSGAYGSGAYGSGAYGSGANDTGAHDSRGYGQGAYGQGRRDPGGRDQGGYDREAYASRGRAGTPPAVGAPGDQGNYWRTG ADPAERPRDQGTDAFTAPPGEASYRREEYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60243; Mature: 60112
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSASRSTSLPGITPFALAGPVLAAGGKDQTGLHLLLAFGLLLLVVAVVGAMRRAWRGRA CCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQEENLPDLPEPPEQTGNVLAAPLRGRYLGTVDAGHWREWIAARGLAGHDGDYIAVYEL HHHHCCCCCCCCCHHHHCCEEEECCCCCEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEE GVRVDRDGEAFWIPREAVRGARLERAHAGKVAAPSRLIVVAWSFEGRELEAGFRGEDRAR CEEECCCCCEEECCHHHHCCHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCHHC QPKVVRSVHDLIGPAPAQPMSGDITSPHALPRPRNRLRPRVPAPARPAEPGAPAAAAPAR CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC GQRHDLAAVAPGGPATMPIPVNGRQPRSERAGWRRGGAAASQGAAAETHAGQRGYSADAP CCCCCEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC GPVASGGYDTAAHGTGALRTGAQDTGAYDIRAHVTGAHSISTDSTGVHGTGAHGASAYDT CCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GAYDTGSHGAGGYGTGSHRTGAYDTGGYRPGAHDVGAQGSQAVSGGTAGYDTAGYSTAGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DTAGYGTDSYDLRRQGTGGLDARGHATGGYGRPGAPGPAAPDQGGLDSAAYHLGAGDTGV CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCC HGSGAYGSGAYGSGAYGSGANDTGAHDSRGYGQGAYGQGRRDPGGRDQGGYDREAYASRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC RAGTPPAVGAPGDQGNYWRTGADPAERPRDQGTDAFTAPPGEASYRREEYP CCCCCCCCCCCCCCCCCCCCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSASRSTSLPGITPFALAGPVLAAGGKDQTGLHLLLAFGLLLLVVAVVGAMRRAWRGRA CCCCCCCCCCCCCHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQEENLPDLPEPPEQTGNVLAAPLRGRYLGTVDAGHWREWIAARGLAGHDGDYIAVYEL HHHHCCCCCCCCCHHHHCCEEEECCCCCEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEE GVRVDRDGEAFWIPREAVRGARLERAHAGKVAAPSRLIVVAWSFEGRELEAGFRGEDRAR CEEECCCCCEEECCHHHHCCHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCHHC QPKVVRSVHDLIGPAPAQPMSGDITSPHALPRPRNRLRPRVPAPARPAEPGAPAAAAPAR CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC GQRHDLAAVAPGGPATMPIPVNGRQPRSERAGWRRGGAAASQGAAAETHAGQRGYSADAP CCCCCEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC GPVASGGYDTAAHGTGALRTGAQDTGAYDIRAHVTGAHSISTDSTGVHGTGAHGASAYDT CCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GAYDTGSHGAGGYGTGSHRTGAYDTGGYRPGAHDVGAQGSQAVSGGTAGYDTAGYSTAGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DTAGYGTDSYDLRRQGTGGLDARGHATGGYGRPGAPGPAAPDQGGLDSAAYHLGAGDTGV CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCC HGSGAYGSGAYGSGAYGSGANDTGAHDSRGYGQGAYGQGRRDPGGRDQGGYDREAYASRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC RAGTPPAVGAPGDQGNYWRTGADPAERPRDQGTDAFTAPPGEASYRREEYP CCCCCCCCCCCCCCCCCCCCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA