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The map label for this gene is ydfJ [H]

Identifier: 158313413

GI number: 158313413

Start: 1881760

End: 1884354

Strand: Direct

Name: ydfJ [H]

Synonym: Franean1_1576

Alternate gene names: 158313413

Gene position: 1881760-1884354 (Clockwise)

Preceding gene: 158313410

Following gene: 158313415

Centisome position: 20.95

GC content: 74.99

Gene sequence:

>2595_bases
ATGTGCGCGCGACACCGCTGGATCGTCGTCGCCCTGTGGGTGGCCGGCCTGGCGGCGCTTCTCGTCTTTGTGCGGGACTC
CGGCGCGCGCTTCAACACCGACGTCGCCGTCCCCGGGACGGACTCCGCGCGGGCCATGGATCTCGTCAGCGAGGTCGTGC
CCGGCGGTGGTCTCCCGGACACCGAGTCGATCGTGTTGCACGCCCGCCGCGGGACGGTCGACGACCCGCTGGTTCGCGAA
CAGATCGCCGCGATGGCGGCGGAGCTCGGCAAGCTGCCCAAGGTGGGCGGGGTCATCGACCCGTTCAACCCGGCCGGCGC
GGTCGTCCTCGGCATCGAGCCGATCAGCGCGAACCGGCGCACCGCGGTCACATCCGTGATCATGAAGGGTTCGGCGCTGA
ACCCGGACCGGGCCGCCGCGCGGCGCCTCATCGACACGGCGCGGGCCTACGACGGGCCGGACCTCCAGGTCGAGGCCGCC
GGCCCGGGCGCGACCGCGCTGAGCGCGACCACGATCTCACCGCGACCGATCATCATCGCGCTCGTCGCCGCCCTGCTGCT
GCTCGGCGTGACCCTGCGCTCCCGCGGCGCGGTCGCCGTCTGCGCCGCGACGTCCGCGGTGGCGACGGTGGCCGCCCTCG
GTGCCATCGTCCTGATCTCCCACACGATCACGACCACCGCCTTCGCTCCGCTGCTCGCGGCCGTCGTCGCGGCCGGGACC
AGCCTCGGCGGCGCCGTCGTCGTCGTGCACCGGGCCCAGTCCGCGCTGCGCGAGGGAGTCGGCCCGGTCGAGGCGGCGGC
GCAGGCCACCGCCCGCGCCGGCTTCGCCGTCGCCTACGGAGGCTTCTGCGTCACCCTCGCGATGGACGGGGTGGCGCTGC
TGGGGCTCAGCTTCTTCGACGGCGTCGCCCTGGGCACCGCTGCTGCCGGGGCGGCGACCGGTCTGGTGATCCTCACCCTG
TTGCCCGCGCTGCTGGGGCTGAGCGGGCCGCGGCTGCTCGGCTGGACCGAACGCCAGCACCTGACGACCAGCGGCCGTGG
CCTGCCGCACCGCCCGGGGCTGCGGGCCTGGTGGGCCCGACAGGTGGACCGCCGCCCGGCCGCCATGGCGCTCGCCGCCG
GCCTCGGGCTGGTCCTGCTCGCCGTCCCAGCCGTGACCCTCAACCTCGGCGGCGCCGACGACGGGGCCGAGTCGACGTCC
ATGAGCACCCGGCGGGCCTACGACCTGCTCAGCGCCGACTTCTTCCCCGGTCTGAACGGCCCGATGCTCGTCGCGGTCGA
ACGGGGCGACGGGCCGTCCGCTGTGCCCGTGGCGGACGTGGTGAGCGCCATCGCGAAGACCCCCGGCGTGGTCAAAGCGG
CTGTCAACCTGGAGAAGGCCGACGCCGGGCTCGCCGTGATCCGGATCGCGCCGCGGGAGGGCCCGCGATCGCCGGCGGCC
GTCGACCTGCTGCACCGGCTGCGCGACGACGTCATCCCGCGCGCCGTGGCCGGCACCGGCTCCCGGGTGTACATCGGCGG
CTCCACGGCACTGTTCGTCGACATGGCGGCGGACTTCCGCGGCGCGACGACGCTGTTCCTACTGGTGATCCTGCTCGTGG
TCGGGGTCCTCGGCCTGCTGATCCTGCGCTCGGTGGAGATCGCGGCCGCGCTGGCGGTGACCAGCGTGCTCGCCGTGCTC
GCGGCGGCCGGCGTCCTCGCCATCCTGTTCCAGACCGACCTGCTCGCCACGGCGCTGGGGCTGGAGACCGGGCCGGTGGA
GCCGTCCATGCTGGTACTCGTGCTGGTCGCCGTGTTCGGCTTGTTGCCAGGCCTGAACCTCAGCCTTCTCGTCCGGCTCA
TGGAACCCGCCGACCGCGCCGGGAACGAACCGCCCACGCGGGACGCGGAGGGCACGGGGGATACGCAGAACGCGGAGGGC
GCGGAGGGCGCGGAGAGTACGCGGAACACCGGCGGGACACGGCGCACACGGCGGCGTCGGCGTGCCGACACCGGGCCCGT
CCGCCGCCGATCCGCCGGTTCCCGGCTCCGTGGACGTCGCGGCGGCACTTCGGGCCCGATCCGGCGCCACCGCACCGACA
CCACCCCCATCCGGCGCGGCCACGCCGACGTCGGTCACGTCATGCTGACCATGAACCTCGTGATGCTGTTCCTCTTCATG
GCGATCGCCGCGCAGCCCTCCCGCACCATGAAGGTCATCGGATGCGGCCTCGCGACCGGCATGGCCATCGACGCGTTCGT
GCTGCGGGCGACGCTCCTGCCCGCCGTTCTCCACCTCCTGCGTCCCACCCGGCCCGGCTCACCCACCCGTCGCACCAGTG
CGACCGGAGATGGGACGGGGGACGGCCGCCGCGCGGCCAGGGATGGCGGCAGGGCCACCGGGGACGGTGGTAGGGCCACC
AGGTCCGCTCGGGCCGGCCGGCGCCGCGCCCGCCCGGGGCAGCCGTCGACACCCGGACCGGCCGGCGGCTCGCCCCGCCC
GGTCACCCGGGTGGCGGCGTTCACCCCGACCGCGTTCGGTGAGGAATCTGCGCCGCGGCGTGACGGGACTGGTCGGGTCG
CGCAGCCGAGCCCGCCCCGGCACCCGGCGGGATGA

Upstream 100 bases:

>100_bases
GTCTGGAAGGCCTCGACCTGGACCACCACTTAGGTCTAACTTGTCCAAAATGAGCGGAAAGTCGGATCTTGCGGGTGGTG
GTGTCAGGGCTTTCGCGGCC

Downstream 100 bases:

>100_bases
GCGGAGACCACCCATCTCAGTCCGGGCCGCAACGGTCGGGGGCGGTGGCGTCCAGCCGGTCCAGGTCCGGCGGGGCTGTG
GCGGGCGCGTCCGAGGCGAA

Product: RND superfamily drug efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 864; Mature: 864

Protein sequence:

>864_residues
MCARHRWIVVALWVAGLAALLVFVRDSGARFNTDVAVPGTDSARAMDLVSEVVPGGGLPDTESIVLHARRGTVDDPLVRE
QIAAMAAELGKLPKVGGVIDPFNPAGAVVLGIEPISANRRTAVTSVIMKGSALNPDRAAARRLIDTARAYDGPDLQVEAA
GPGATALSATTISPRPIIIALVAALLLLGVTLRSRGAVAVCAATSAVATVAALGAIVLISHTITTTAFAPLLAAVVAAGT
SLGGAVVVVHRAQSALREGVGPVEAAAQATARAGFAVAYGGFCVTLAMDGVALLGLSFFDGVALGTAAAGAATGLVILTL
LPALLGLSGPRLLGWTERQHLTTSGRGLPHRPGLRAWWARQVDRRPAAMALAAGLGLVLLAVPAVTLNLGGADDGAESTS
MSTRRAYDLLSADFFPGLNGPMLVAVERGDGPSAVPVADVVSAIAKTPGVVKAAVNLEKADAGLAVIRIAPREGPRSPAA
VDLLHRLRDDVIPRAVAGTGSRVYIGGSTALFVDMAADFRGATTLFLLVILLVVGVLGLLILRSVEIAAALAVTSVLAVL
AAAGVLAILFQTDLLATALGLETGPVEPSMLVLVLVAVFGLLPGLNLSLLVRLMEPADRAGNEPPTRDAEGTGDTQNAEG
AEGAESTRNTGGTRRTRRRRRADTGPVRRRSAGSRLRGRRGGTSGPIRRHRTDTTPIRRGHADVGHVMLTMNLVMLFLFM
AIAAQPSRTMKVIGCGLATGMAIDAFVLRATLLPAVLHLLRPTRPGSPTRRTSATGDGTGDGRRAARDGGRATGDGGRAT
RSARAGRRRARPGQPSTPGPAGGSPRPVTRVAAFTPTAFGEESAPRRDGTGRVAQPSPPRHPAG

Sequences:

>Translated_864_residues
MCARHRWIVVALWVAGLAALLVFVRDSGARFNTDVAVPGTDSARAMDLVSEVVPGGGLPDTESIVLHARRGTVDDPLVRE
QIAAMAAELGKLPKVGGVIDPFNPAGAVVLGIEPISANRRTAVTSVIMKGSALNPDRAAARRLIDTARAYDGPDLQVEAA
GPGATALSATTISPRPIIIALVAALLLLGVTLRSRGAVAVCAATSAVATVAALGAIVLISHTITTTAFAPLLAAVVAAGT
SLGGAVVVVHRAQSALREGVGPVEAAAQATARAGFAVAYGGFCVTLAMDGVALLGLSFFDGVALGTAAAGAATGLVILTL
LPALLGLSGPRLLGWTERQHLTTSGRGLPHRPGLRAWWARQVDRRPAAMALAAGLGLVLLAVPAVTLNLGGADDGAESTS
MSTRRAYDLLSADFFPGLNGPMLVAVERGDGPSAVPVADVVSAIAKTPGVVKAAVNLEKADAGLAVIRIAPREGPRSPAA
VDLLHRLRDDVIPRAVAGTGSRVYIGGSTALFVDMAADFRGATTLFLLVILLVVGVLGLLILRSVEIAAALAVTSVLAVL
AAAGVLAILFQTDLLATALGLETGPVEPSMLVLVLVAVFGLLPGLNLSLLVRLMEPADRAGNEPPTRDAEGTGDTQNAEG
AEGAESTRNTGGTRRTRRRRRADTGPVRRRSAGSRLRGRRGGTSGPIRRHRTDTTPIRRGHADVGHVMLTMNLVMLFLFM
AIAAQPSRTMKVIGCGLATGMAIDAFVLRATLLPAVLHLLRPTRPGSPTRRTSATGDGTGDGRRAARDGGRATGDGGRAT
RSARAGRRRARPGQPSTPGPAGGSPRPVTRVAAFTPTAFGEESAPRRDGTGRVAQPSPPRHPAG
>Mature_864_residues
MCARHRWIVVALWVAGLAALLVFVRDSGARFNTDVAVPGTDSARAMDLVSEVVPGGGLPDTESIVLHARRGTVDDPLVRE
QIAAMAAELGKLPKVGGVIDPFNPAGAVVLGIEPISANRRTAVTSVIMKGSALNPDRAAARRLIDTARAYDGPDLQVEAA
GPGATALSATTISPRPIIIALVAALLLLGVTLRSRGAVAVCAATSAVATVAALGAIVLISHTITTTAFAPLLAAVVAAGT
SLGGAVVVVHRAQSALREGVGPVEAAAQATARAGFAVAYGGFCVTLAMDGVALLGLSFFDGVALGTAAAGAATGLVILTL
LPALLGLSGPRLLGWTERQHLTTSGRGLPHRPGLRAWWARQVDRRPAAMALAAGLGLVLLAVPAVTLNLGGADDGAESTS
MSTRRAYDLLSADFFPGLNGPMLVAVERGDGPSAVPVADVVSAIAKTPGVVKAAVNLEKADAGLAVIRIAPREGPRSPAA
VDLLHRLRDDVIPRAVAGTGSRVYIGGSTALFVDMAADFRGATTLFLLVILLVVGVLGLLILRSVEIAAALAVTSVLAVL
AAAGVLAILFQTDLLATALGLETGPVEPSMLVLVLVAVFGLLPGLNLSLLVRLMEPADRAGNEPPTRDAEGTGDTQNAEG
AEGAESTRNTGGTRRTRRRRRADTGPVRRRSAGSRLRGRRGGTSGPIRRHRTDTTPIRRGHADVGHVMLTMNLVMLFLFM
AIAAQPSRTMKVIGCGLATGMAIDAFVLRATLLPAVLHLLRPTRPGSPTRRTSATGDGTGDGRRAARDGGRATGDGGRAT
RSARAGRRRARPGQPSTPGPAGGSPRPVTRVAAFTPTAFGEESAPRRDGTGRVAQPSPPRHPAG

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 88435; Mature: 88435

Theoretical pI: Translated: 11.78; Mature: 11.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCARHRWIVVALWVAGLAALLVFVRDSGARFNTDVAVPGTDSARAMDLVSEVVPGGGLPD
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCC
TESIVLHARRGTVDDPLVREQIAAMAAELGKLPKVGGVIDPFNPAGAVVLGIEPISANRR
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCH
TAVTSVIMKGSALNPDRAAARRLIDTARAYDGPDLQVEAAGPGATALSATTISPRPIIIA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCHHHHH
LVAALLLLGVTLRSRGAVAVCAATSAVATVAALGAIVLISHTITTTAFAPLLAAVVAAGT
HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SLGGAVVVVHRAQSALREGVGPVEAAAQATARAGFAVAYGGFCVTLAMDGVALLGLSFFD
CCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHHHHHH
GVALGTAAAGAATGLVILTLLPALLGLSGPRLLGWTERQHLTTSGRGLPHRPGLRAWWAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHCCCCCCCCCCCCCHHHHHHH
QVDRRPAAMALAAGLGLVLLAVPAVTLNLGGADDGAESTSMSTRRAYDLLSADFFPGLNG
HHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PMLVAVERGDGPSAVPVADVVSAIAKTPGVVKAAVNLEKADAGLAVIRIAPREGPRSPAA
CEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEHHHCHHHCCCCEEEEEEECCCCCCCHHH
VDLLHRLRDDVIPRAVAGTGSRVYIGGSTALFVDMAADFRGATTLFLLVILLVVGVLGLL
HHHHHHHHHHHCCHHHCCCCCEEEECCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHH
ILRSVEIAAALAVTSVLAVLAAAGVLAILFQTDLLATALGLETGPVEPSMLVLVLVAVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LLPGLNLSLLVRLMEPADRAGNEPPTRDAEGTGDTQNAEGAEGAESTRNTGGTRRTRRRR
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHH
RADTGPVRRRSAGSRLRGRRGGTSGPIRRHRTDTTPIRRGHADVGHVMLTMNLVMLFLFM
CCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AIAAQPSRTMKVIGCGLATGMAIDAFVLRATLLPAVLHLLRPTRPGSPTRRTSATGDGTG
HHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DGRRAARDGGRATGDGGRATRSARAGRRRARPGQPSTPGPAGGSPRPVTRVAAFTPTAFG
CCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
EESAPRRDGTGRVAQPSPPRHPAG
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCARHRWIVVALWVAGLAALLVFVRDSGARFNTDVAVPGTDSARAMDLVSEVVPGGGLPD
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCC
TESIVLHARRGTVDDPLVREQIAAMAAELGKLPKVGGVIDPFNPAGAVVLGIEPISANRR
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCH
TAVTSVIMKGSALNPDRAAARRLIDTARAYDGPDLQVEAAGPGATALSATTISPRPIIIA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCHHHHH
LVAALLLLGVTLRSRGAVAVCAATSAVATVAALGAIVLISHTITTTAFAPLLAAVVAAGT
HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SLGGAVVVVHRAQSALREGVGPVEAAAQATARAGFAVAYGGFCVTLAMDGVALLGLSFFD
CCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHHHHHH
GVALGTAAAGAATGLVILTLLPALLGLSGPRLLGWTERQHLTTSGRGLPHRPGLRAWWAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHCCCCCCCCCCCCCHHHHHHH
QVDRRPAAMALAAGLGLVLLAVPAVTLNLGGADDGAESTSMSTRRAYDLLSADFFPGLNG
HHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PMLVAVERGDGPSAVPVADVVSAIAKTPGVVKAAVNLEKADAGLAVIRIAPREGPRSPAA
CEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEHHHCHHHCCCCEEEEEEECCCCCCCHHH
VDLLHRLRDDVIPRAVAGTGSRVYIGGSTALFVDMAADFRGATTLFLLVILLVVGVLGLL
HHHHHHHHHHHCCHHHCCCCCEEEECCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHH
ILRSVEIAAALAVTSVLAVLAAAGVLAILFQTDLLATALGLETGPVEPSMLVLVLVAVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LLPGLNLSLLVRLMEPADRAGNEPPTRDAEGTGDTQNAEGAEGAESTRNTGGTRRTRRRR
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHH
RADTGPVRRRSAGSRLRGRRGGTSGPIRRHRTDTTPIRRGHADVGHVMLTMNLVMLFLFM
CCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AIAAQPSRTMKVIGCGLATGMAIDAFVLRATLLPAVLHLLRPTRPGSPTRRTSATGDGTG
HHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DGRRAARDGGRATGDGGRATRSARAGRRRARPGQPSTPGPAGGSPRPVTRVAAFTPTAFG
CCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
EESAPRRDGTGRVAQPSPPRHPAG
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]