Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313397

Identifier: 158313397

GI number: 158313397

Start: 1866617

End: 1867363

Strand: Direct

Name: 158313397

Synonym: Franean1_1560

Alternate gene names: NA

Gene position: 1866617-1867363 (Clockwise)

Preceding gene: 158313395

Following gene: 158313400

Centisome position: 20.78

GC content: 66.8

Gene sequence:

>747_bases
GTGCGTTTCCGCAGGACGCTGGTCTCGCTGGCGGCCGGAGGGATGCTGTGCTCCGCAACGGCCCCGGCCGCCGCCGACGC
GATCTCACCGCCGAAGATCCAGCCCTTCGATGAATGTTCTGCGGCGGACTACCAGAACGATCCCCGGCTGGGGCCGGCAA
AGCTTCCGTTCTTCGGCGACGTCGGCGATGAGGTCGACGACTACTCGCGGACCGGCGGCCATTCGACCGATCAGTTCCTG
GGTACCTGGTGGGACCCGTCCGCCAGTTTCTCGCCGTTCCCGTCCATACCGGGGAACTGGATCTTCCCGCCGGCGGACGG
CTATTACATCAACCCGGACGGCTCGCCGGTCAGGACCAAGGTGTCGCTGGTTCCGGGCCAGCGGATCGACCGTTTCGGCC
TGCCACGCGGCAGCTTCCTCTCGCCTCGGGGAACGGACTACGAGAACAGGTCGATCCCGCCGTCCAACCTCGACGACGCC
GCGGATCCGGGCGACTGCAATTACCACACCTACCAGGTGGTCCGGGAGTTCCGGGTGTTTTCCGGGGCGATCCGCCCGTG
GTTCGACCAGCCCGGTAACGGCCTGCAGTACCAGGTCGTGTGTTCGCTCGTCCCGGGGGCGACGGCGTCGCCACGGTGCA
ACCAGACGACGGGAAACCTGCAGGTCCAGTACCTGCTGGACAAAAAGTACCTCGTGGAAGTTCCCACGGACGACCGGATT
GTCCGACCCGCCGGCCCGCCTCGGTGA

Upstream 100 bases:

>100_bases
ACGCGACGCAATGCTCCAATCCGACCTCGCGCTCCAGGTCAAGATCAGCTAATTACCGTTCGAAGTCGCCGCGCCAGGCG
CAGGACTTCGGGAGGAAAAG

Downstream 100 bases:

>100_bases
AACGGGCTCGGCCGGCGGGCCCGGTGGGCTACCGGCCGAGCATGGCCTCCAGCGCGATGTTGTCGGCGTCACGGAAGGCG
AGGATCCATCCGAACGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRFRRTLVSLAAGGMLCSATAPAAADAISPPKIQPFDECSAADYQNDPRLGPAKLPFFGDVGDEVDDYSRTGGHSTDQFL
GTWWDPSASFSPFPSIPGNWIFPPADGYYINPDGSPVRTKVSLVPGQRIDRFGLPRGSFLSPRGTDYENRSIPPSNLDDA
ADPGDCNYHTYQVVREFRVFSGAIRPWFDQPGNGLQYQVVCSLVPGATASPRCNQTTGNLQVQYLLDKKYLVEVPTDDRI
VRPAGPPR

Sequences:

>Translated_248_residues
MRFRRTLVSLAAGGMLCSATAPAAADAISPPKIQPFDECSAADYQNDPRLGPAKLPFFGDVGDEVDDYSRTGGHSTDQFL
GTWWDPSASFSPFPSIPGNWIFPPADGYYINPDGSPVRTKVSLVPGQRIDRFGLPRGSFLSPRGTDYENRSIPPSNLDDA
ADPGDCNYHTYQVVREFRVFSGAIRPWFDQPGNGLQYQVVCSLVPGATASPRCNQTTGNLQVQYLLDKKYLVEVPTDDRI
VRPAGPPR
>Mature_248_residues
MRFRRTLVSLAAGGMLCSATAPAAADAISPPKIQPFDECSAADYQNDPRLGPAKLPFFGDVGDEVDDYSRTGGHSTDQFL
GTWWDPSASFSPFPSIPGNWIFPPADGYYINPDGSPVRTKVSLVPGQRIDRFGLPRGSFLSPRGTDYENRSIPPSNLDDA
ADPGDCNYHTYQVVREFRVFSGAIRPWFDQPGNGLQYQVVCSLVPGATASPRCNQTTGNLQVQYLLDKKYLVEVPTDDRI
VRPAGPPR

Specific function: Unknown

COG id: COG5444

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27131; Mature: 27131

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRRTLVSLAAGGMLCSATAPAAADAISPPKIQPFDECSAADYQNDPRLGPAKLPFFGD
CCHHHHHHHHHCCCEEEECCCCCHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
VGDEVDDYSRTGGHSTDQFLGTWWDPSASFSPFPSIPGNWIFPPADGYYINPDGSPVRTK
CCCCHHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCCEEEE
VSLVPGQRIDRFGLPRGSFLSPRGTDYENRSIPPSNLDDAADPGDCNYHTYQVVREFRVF
EEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SGAIRPWFDQPGNGLQYQVVCSLVPGATASPRCNQTTGNLQVQYLLDKKYLVEVPTDDRI
HCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEE
VRPAGPPR
ECCCCCCC
>Mature Secondary Structure
MRFRRTLVSLAAGGMLCSATAPAAADAISPPKIQPFDECSAADYQNDPRLGPAKLPFFGD
CCHHHHHHHHHCCCEEEECCCCCHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
VGDEVDDYSRTGGHSTDQFLGTWWDPSASFSPFPSIPGNWIFPPADGYYINPDGSPVRTK
CCCCHHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCCEEEE
VSLVPGQRIDRFGLPRGSFLSPRGTDYENRSIPPSNLDDAADPGDCNYHTYQVVREFRVF
EEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SGAIRPWFDQPGNGLQYQVVCSLVPGATASPRCNQTTGNLQVQYLLDKKYLVEVPTDDRI
HCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEE
VRPAGPPR
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA