| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yajO [H]
Identifier: 158313393
GI number: 158313393
Start: 1863560
End: 1864609
Strand: Direct
Name: yajO [H]
Synonym: Franean1_1556
Alternate gene names: 158313393
Gene position: 1863560-1864609 (Clockwise)
Preceding gene: 158313392
Following gene: 158313395
Centisome position: 20.75
GC content: 70.1
Gene sequence:
>1050_bases ATGCGGTACCGCAAGTTCGGGCGGACGGGCATCGAGGTCAGCCGGCAGTGCCTGGGATCCATGATGTTCGGTGTGATCGG CAACCCCGACCACGCCGCGTGCGAGCGCATCATCGCCCGGGCGCTGGACGCCGGGATCAACTTCATCGACACCGCCGACA TCTACTCGCGGGGTGAGAGCGAGCAGATCGTCGGGAAGGCCATCAAGGGCCGCCGCGACGACATCGTCCTGGCCACCAAG TGCTTCAACCCGATGGGCGGGGACCGCAACCGCCGCGGCGCCTCCCGCCGGTGGATCACGCGCGCCGTCGAGGACAGCCT CCGCCGCCTCGACACCGACTACATCGACCTCTTCCAGATCCACCGGCATGACTGGAACACCGACCTGGAAGAGACCCTCG GCGCGCTGAACGACCTCGTGCACCAGGGCAAGATCCGTTACCTGGGCTCGTCGACGTTTCCCGCGGACTGGATCGTCGAG GCGCAGTGGGCCGCCCGCCGCCGCAACACCGAGCGTTTCGTCTGCGAGCAGCCCCAGTACTCGATCTTCGCCCGCTCGGT CGAGCAGGCCGTCCTGCCCGCCTGCCGGCGGCACGACATCGCGGTGATTCCCTGGAGCCCGCTCTCCGGCGGCTGGCTGA CCGGGAAGTACCGGCGCGGGCAGGCGGTGCCGGCCGACGCCCGGTACGCGGCCGGCAATGTCATGGCACAGGGGCGGGCC GTCGGGGAGAGCCCCGAGTCGCAGGCCCGGTTCGACGCGGTCGAGCAGCTGTCCGCGGTGGCGGCGGAGGCCGGCCTCTC CCTCACCCATCTTGCGCTCGGGTTCGTGGAGAGCCATCCGGCGATCACTTCGACGATCATCGGCCCGCGCACGATGGAGC AGCTCGAGGACGTCCTCAGCGGGGCCGACGTCGTGCTCGACGCGGCGACGCTCGACGCGATCGACAAGATCGTGGAGCCC GGGACCGATTTCGTCGGCGTCCGGCACATGACCGGTGACCCGTCCCTGCTGCCCGAGACGCGCCGGCGGCTGGCAACGCA GTTCGGCTGA
Upstream 100 bases:
>100_bases GCGGGGGTGCGTCGCGACGATCGCTGGTGAAATGCTGGGCCGGGCAGGCAGCGGGACGGCCGGCGGGGCCGGGCAACTGT GGGTGACGGAAGGCGGGAAC
Downstream 100 bases:
>100_bases CCCGGCCCCGGCCGATGCCCTCACGACCGGTTCACCGGGCATCGGCCGCAGGTCACACCCGCGGTCGGTCACACCCGCGG GGGCGCCGGCCGTCCGGCCG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MRYRKFGRTGIEVSRQCLGSMMFGVIGNPDHAACERIIARALDAGINFIDTADIYSRGESEQIVGKAIKGRRDDIVLATK CFNPMGGDRNRRGASRRWITRAVEDSLRRLDTDYIDLFQIHRHDWNTDLEETLGALNDLVHQGKIRYLGSSTFPADWIVE AQWAARRRNTERFVCEQPQYSIFARSVEQAVLPACRRHDIAVIPWSPLSGGWLTGKYRRGQAVPADARYAAGNVMAQGRA VGESPESQARFDAVEQLSAVAAEAGLSLTHLALGFVESHPAITSTIIGPRTMEQLEDVLSGADVVLDAATLDAIDKIVEP GTDFVGVRHMTGDPSLLPETRRRLATQFG
Sequences:
>Translated_349_residues MRYRKFGRTGIEVSRQCLGSMMFGVIGNPDHAACERIIARALDAGINFIDTADIYSRGESEQIVGKAIKGRRDDIVLATK CFNPMGGDRNRRGASRRWITRAVEDSLRRLDTDYIDLFQIHRHDWNTDLEETLGALNDLVHQGKIRYLGSSTFPADWIVE AQWAARRRNTERFVCEQPQYSIFARSVEQAVLPACRRHDIAVIPWSPLSGGWLTGKYRRGQAVPADARYAAGNVMAQGRA VGESPESQARFDAVEQLSAVAAEAGLSLTHLALGFVESHPAITSTIIGPRTMEQLEDVLSGADVVLDAATLDAIDKIVEP GTDFVGVRHMTGDPSLLPETRRRLATQFG >Mature_349_residues MRYRKFGRTGIEVSRQCLGSMMFGVIGNPDHAACERIIARALDAGINFIDTADIYSRGESEQIVGKAIKGRRDDIVLATK CFNPMGGDRNRRGASRRWITRAVEDSLRRLDTDYIDLFQIHRHDWNTDLEETLGALNDLVHQGKIRYLGSSTFPADWIVE AQWAARRRNTERFVCEQPQYSIFARSVEQAVLPACRRHDIAVIPWSPLSGGWLTGKYRRGQAVPADARYAAGNVMAQGRA VGESPESQARFDAVEQLSAVAAEAGLSLTHLALGFVESHPAITSTIIGPRTMEQLEDVLSGADVVLDAATLDAIDKIVEP GTDFVGVRHMTGDPSLLPETRRRLATQFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=325, Percent_Identity=34.4615384615385, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI27436962, Length=325, Percent_Identity=34.4615384615385, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI27436966, Length=325, Percent_Identity=34.1538461538462, Blast_Score=156, Evalue=2e-38, Organism=Homo sapiens, GI27436969, Length=328, Percent_Identity=32.3170731707317, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI4504825, Length=326, Percent_Identity=32.2085889570552, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI27436971, Length=328, Percent_Identity=31.4024390243902, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI223718702, Length=315, Percent_Identity=29.2063492063492, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI41152114, Length=316, Percent_Identity=28.1645569620253, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI41327764, Length=292, Percent_Identity=28.4246575342466, Blast_Score=86, Evalue=7e-17, Organism=Escherichia coli, GI87081735, Length=329, Percent_Identity=40.1215805471125, Blast_Score=218, Evalue=6e-58, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=30.5475504322767, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1789375, Length=333, Percent_Identity=28.2282282282282, Blast_Score=128, Evalue=7e-31, Organism=Escherichia coli, GI1788070, Length=330, Percent_Identity=32.4242424242424, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1788081, Length=182, Percent_Identity=32.967032967033, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1787674, Length=228, Percent_Identity=27.6315789473684, Blast_Score=78, Evalue=7e-16, Organism=Caenorhabditis elegans, GI212645785, Length=309, Percent_Identity=27.5080906148867, Blast_Score=68, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=347, Percent_Identity=27.0893371757925, Blast_Score=140, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6323998, Length=334, Percent_Identity=29.940119760479, Blast_Score=129, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6319958, Length=300, Percent_Identity=31, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6319951, Length=287, Percent_Identity=29.616724738676, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6322615, Length=290, Percent_Identity=28.6206896551724, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6321052, Length=158, Percent_Identity=34.1772151898734, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24640980, Length=335, Percent_Identity=25.3731343283582, Blast_Score=101, Evalue=7e-22, Organism=Drosophila melanogaster, GI45549126, Length=335, Percent_Identity=25.3731343283582, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24646155, Length=165, Percent_Identity=33.9393939393939, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24646159, Length=221, Percent_Identity=28.0542986425339, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38592; Mature: 38592
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRKFGRTGIEVSRQCLGSMMFGVIGNPDHAACERIIARALDAGINFIDTADIYSRGES CCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEECHHHHHCCCH EQIVGKAIKGRRDDIVLATKCFNPMGGDRNRRGASRRWITRAVEDSLRRLDTDYIDLFQI HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH HRHDWNTDLEETLGALNDLVHQGKIRYLGSSTFPADWIVEAQWAARRRNTERFVCEQPQY HHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHEEECHHHHHHCCCCCEEECCCCH SIFARSVEQAVLPACRRHDIAVIPWSPLSGGWLTGKYRRGQAVPADARYAAGNVMAQGRA HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCCCCCCCCCCCHHHCCCHHHCCCC VGESPESQARFDAVEQLSAVAAEAGLSLTHLALGFVESHPAITSTIIGPRTMEQLEDVLS CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHC GADVVLDAATLDAIDKIVEPGTDFVGVRHMTGDPSLLPETRRRLATQFG CCHHEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MRYRKFGRTGIEVSRQCLGSMMFGVIGNPDHAACERIIARALDAGINFIDTADIYSRGES CCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEECHHHHHCCCH EQIVGKAIKGRRDDIVLATKCFNPMGGDRNRRGASRRWITRAVEDSLRRLDTDYIDLFQI HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH HRHDWNTDLEETLGALNDLVHQGKIRYLGSSTFPADWIVEAQWAARRRNTERFVCEQPQY HHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHEEECHHHHHHCCCCCEEECCCCH SIFARSVEQAVLPACRRHDIAVIPWSPLSGGWLTGKYRRGQAVPADARYAAGNVMAQGRA HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCCCCCCCCCCCHHHCCCHHHCCCC VGESPESQARFDAVEQLSAVAAEAGLSLTHLALGFVESHPAITSTIIGPRTMEQLEDVLS CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHC GADVVLDAATLDAIDKIVEPGTDFVGVRHMTGDPSLLPETRRRLATQFG CCHHEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]