| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is tesB [H]
Identifier: 158313350
GI number: 158313350
Start: 1816046
End: 1816903
Strand: Direct
Name: tesB [H]
Synonym: Franean1_1512
Alternate gene names: 158313350
Gene position: 1816046-1816903 (Clockwise)
Preceding gene: 158313349
Following gene: 158313355
Centisome position: 20.22
GC content: 70.98
Gene sequence:
>858_bases ATGACCGAACGCAAGCCCGACTTCGCGGACCTGCTGATGTTGGAGTCCGTGGACCGCGACATCTTCCGTGGTCTGTGCCA TGACGGCGCGCCGATGCGCGCGTTCGGCGGGCAGGTCGCGGCGCAGGCCCAGGTGGCCGCCGGTCGGACTGTCGAGCCCG ACCGGCGGATGCATTCGCTGCACGGCTATTTCCTCCGCCCCGGCCGCACCGACGCACCGATCGTGTACCTCGTCGAGCGC ATCCGGGACGGTCGGTCGTTCACGACGCGCCGCGTCAGCGCGGTGCAGGACGGGGAGACCATCTTCTCGATGTCCGCGTC GTTCCAGCGACCGCGCGAAGCCGACGAGACGCACCGGCTGCGTGCTCCGGACGTACCCGGGCCGGAGACGTTGCCCCGGT GGTGGGGGCCGATCGAGGAGGCCCCCGAGTATCGGCCGTTCCTGCTGATCGACGTCCGCTCGACGACGGGCCCTCTCGGG GGCGCCGAAGCCCGGCAGGCTGCCGCCGCGGCAGGATCGGTCGACGGGATGCCACGGCAGAGCGTCTGGGTACGGGTCGA CCAGGTGCTGCCGGACGATCCGCTGCTGCACGTCTGCGCGCTGACGTACCTCTCCGACCTGACCCTGGCCAGCACTGCGA GCCTGCCCTACAACGGCCTGCCGGGGCGGCTCGACATCGTCTCCCTCGACCACGCGATGTGGTTCCACCGGCCGTTCCGA GCGGACGACTGGCTGCTGTTCGCGCAGGACAGTCCGAGCGCCGACAGCGGGAGAGGCCTCTCCCGGGGCATGTTCTTCAC CCGGGACGGCCTGCTCGTCGCCTCCGCCATCCAGGAGGTCGGCCTGTTCCGCCGCTGA
Upstream 100 bases:
>100_bases CCGCGAACCCGGCCGTCGAGCGGCGCACCGCCGTGACGCCGGCGAGCCGCGCGCCGCGCCGGTGTGCGACGTCCGACCTG GTGTCTGGCGGCGGACGTCG
Downstream 100 bases:
>100_bases GGCCCGCCCGCCGCCGGTGGGCGCCGGGTCAGCGGACGACCTCGAACACCTGCTTCTGGACACCGTTCGGGTAGGCGTCG CATTCGACCAGTTTCAGCAT
Product: palmitoyl-CoA hydrolase
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTERKPDFADLLMLESVDRDIFRGLCHDGAPMRAFGGQVAAQAQVAAGRTVEPDRRMHSLHGYFLRPGRTDAPIVYLVER IRDGRSFTTRRVSAVQDGETIFSMSASFQRPREADETHRLRAPDVPGPETLPRWWGPIEEAPEYRPFLLIDVRSTTGPLG GAEARQAAAAAGSVDGMPRQSVWVRVDQVLPDDPLLHVCALTYLSDLTLASTASLPYNGLPGRLDIVSLDHAMWFHRPFR ADDWLLFAQDSPSADSGRGLSRGMFFTRDGLLVASAIQEVGLFRR
Sequences:
>Translated_285_residues MTERKPDFADLLMLESVDRDIFRGLCHDGAPMRAFGGQVAAQAQVAAGRTVEPDRRMHSLHGYFLRPGRTDAPIVYLVER IRDGRSFTTRRVSAVQDGETIFSMSASFQRPREADETHRLRAPDVPGPETLPRWWGPIEEAPEYRPFLLIDVRSTTGPLG GAEARQAAAAAGSVDGMPRQSVWVRVDQVLPDDPLLHVCALTYLSDLTLASTASLPYNGLPGRLDIVSLDHAMWFHRPFR ADDWLLFAQDSPSADSGRGLSRGMFFTRDGLLVASAIQEVGLFRR >Mature_284_residues TERKPDFADLLMLESVDRDIFRGLCHDGAPMRAFGGQVAAQAQVAAGRTVEPDRRMHSLHGYFLRPGRTDAPIVYLVERI RDGRSFTTRRVSAVQDGETIFSMSASFQRPREADETHRLRAPDVPGPETLPRWWGPIEEAPEYRPFLLIDVRSTTGPLGG AEARQAAAAAGSVDGMPRQSVWVRVDQVLPDDPLLHVCALTYLSDLTLASTASLPYNGLPGRLDIVSLDHAMWFHRPFRA DDWLLFAQDSPSADSGRGLSRGMFFTRDGLLVASAIQEVGLFRR
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=282, Percent_Identity=37.9432624113475, Blast_Score=174, Evalue=1e-43, Organism=Escherichia coli, GI1786657, Length=274, Percent_Identity=42.3357664233577, Blast_Score=201, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17558508, Length=302, Percent_Identity=35.7615894039735, Blast_Score=159, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71988741, Length=285, Percent_Identity=36.140350877193, Blast_Score=154, Evalue=4e-38, Organism=Caenorhabditis elegans, GI115532456, Length=272, Percent_Identity=34.9264705882353, Blast_Score=134, Evalue=8e-32, Organism=Caenorhabditis elegans, GI17531889, Length=272, Percent_Identity=34.9264705882353, Blast_Score=133, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17531885, Length=272, Percent_Identity=34.9264705882353, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI212645202, Length=289, Percent_Identity=31.8339100346021, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71982224, Length=293, Percent_Identity=29.6928327645051, Blast_Score=107, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 31628; Mature: 31497
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERKPDFADLLMLESVDRDIFRGLCHDGAPMRAFGGQVAAQAQVAAGRTVEPDRRMHSL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHH HGYFLRPGRTDAPIVYLVERIRDGRSFTTRRVSAVQDGETIFSMSASFQRPREADETHRL CCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEHHHHHCCCCCCCHHHCC RAPDVPGPETLPRWWGPIEEAPEYRPFLLIDVRSTTGPLGGAEARQAAAAAGSVDGMPRQ CCCCCCCCCCCHHHCCCHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCC SVWVRVDQVLPDDPLLHVCALTYLSDLTLASTASLPYNGLPGRLDIVSLDHAMWFHRPFR HHEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHCCCCC ADDWLLFAQDSPSADSGRGLSRGMFFTRDGLLVASAIQEVGLFRR CCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure TERKPDFADLLMLESVDRDIFRGLCHDGAPMRAFGGQVAAQAQVAAGRTVEPDRRMHSL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHH HGYFLRPGRTDAPIVYLVERIRDGRSFTTRRVSAVQDGETIFSMSASFQRPREADETHRL CCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEHHHHHCCCCCCCHHHCC RAPDVPGPETLPRWWGPIEEAPEYRPFLLIDVRSTTGPLGGAEARQAAAAAGSVDGMPRQ CCCCCCCCCCCHHHCCCHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCC SVWVRVDQVLPDDPLLHVCALTYLSDLTLASTASLPYNGLPGRLDIVSLDHAMWFHRPFR HHEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHCCCCC ADDWLLFAQDSPSADSGRGLSRGMFFTRDGLLVASAIQEVGLFRR CCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]