| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313321
Identifier: 158313321
GI number: 158313321
Start: 1773396
End: 1773857
Strand: Direct
Name: 158313321
Synonym: Franean1_1483
Alternate gene names: NA
Gene position: 1773396-1773857 (Clockwise)
Preceding gene: 158313318
Following gene: 158313326
Centisome position: 19.74
GC content: 73.59
Gene sequence:
>462_bases GTGAGGAGGCGGCGAGCGGCCACAGCCGGAGTAGGGGAGCCGACCGCGTCCGCGTCCGCGCCTCAGGTCGTCGAGACCGC GGTCGTCTCGGCGACGCCCGTCGCCGCGGAGACACCGGCGACGCCGACCGGAAGCGCCGCCGCCGAGCCGACGGCGGCCG GCGCCACCCCTGAGCCGACGCTCCGGCTGGTGGTGCCCGAAGCCGAGGTCGAGGCCCAGATCGGTCCGATGCGCCGGATG TGGGACGCGGGAGGGGAGTACACGCCGGACTGCCCCGGCGACCTCCGCAACGAGGTGGATGCCGAGATGTACTGCCTCGG GACCCGCGCCGAGGACAGCTCGACGATCTATGTCCACGTGTACGTGGCCTGGGTCAGCGGCGACAAGACCGGCCTCGGAT GGAGCTATCCCGCCCCGTCGCCCGAGCCCACGGCTGGTACTACGGCAGCCTCGTCGCCGTGA
Upstream 100 bases:
>100_bases CGCCGATACGCTAATTGTCGGTCGCAAGCTGTAGCTTCTGCATGATAGAGCAAGCTAATGGAAGTAAACAACCTGAATCG TCGATAGCGATGGGGAATCC
Downstream 100 bases:
>100_bases TCATGCGGTCAAGTCCGGGCGGGCGCGGGTGATGACCTCCTCGGCGGTCAGCGGCGAAGGCGGATGGTGGCTCAGGCACA TCGGTGTGCGGATCTTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRRRRAATAGVGEPTASASAPQVVETAVVSATPVAAETPATPTGSAAAEPTAAGATPEPTLRLVVPEAEVEAQIGPMRRM WDAGGEYTPDCPGDLRNEVDAEMYCLGTRAEDSSTIYVHVYVAWVSGDKTGLGWSYPAPSPEPTAGTTAASSP
Sequences:
>Translated_153_residues MRRRRAATAGVGEPTASASAPQVVETAVVSATPVAAETPATPTGSAAAEPTAAGATPEPTLRLVVPEAEVEAQIGPMRRM WDAGGEYTPDCPGDLRNEVDAEMYCLGTRAEDSSTIYVHVYVAWVSGDKTGLGWSYPAPSPEPTAGTTAASSP >Mature_153_residues MRRRRAATAGVGEPTASASAPQVVETAVVSATPVAAETPATPTGSAAAEPTAAGATPEPTLRLVVPEAEVEAQIGPMRRM WDAGGEYTPDCPGDLRNEVDAEMYCLGTRAEDSSTIYVHVYVAWVSGDKTGLGWSYPAPSPEPTAGTTAASSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15702; Mature: 15702
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRRAATAGVGEPTASASAPQVVETAVVSATPVAAETPATPTGSAAAEPTAAGATPEPT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LRLVVPEAEVEAQIGPMRRMWDAGGEYTPDCPGDLRNEVDAEMYCLGTRAEDSSTIYVHV EEEEECCHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCEEEEEE YVAWVSGDKTGLGWSYPAPSPEPTAGTTAASSP EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRRRAATAGVGEPTASASAPQVVETAVVSATPVAAETPATPTGSAAAEPTAAGATPEPT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LRLVVPEAEVEAQIGPMRRMWDAGGEYTPDCPGDLRNEVDAEMYCLGTRAEDSSTIYVHV EEEEECCHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCEEEEEE YVAWVSGDKTGLGWSYPAPSPEPTAGTTAASSP EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA