| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313213
Identifier: 158313213
GI number: 158313213
Start: 1646827
End: 1649718
Strand: Direct
Name: 158313213
Synonym: Franean1_1367
Alternate gene names: NA
Gene position: 1646827-1649718 (Clockwise)
Preceding gene: 158313212
Following gene: 158313214
Centisome position: 18.33
GC content: 71.96
Gene sequence:
>2892_bases ATGCGAGGTCACCGGCCGACCGGTCGCCACGATCTCATCCCACCGCGGTGCACCCGTCGAGCCTTGCGGGCCGGCCCCGC GTGGTTGGCGGTACGTGTCGTCGGCCGAGCGGTGCTCGCGCTCGCCGCGCTGACAGCGTTCTCGATGATCCCGCTGGTGC TGTGGATGTGGCGGGACGTCCCGCTGCCCTCCACCTGGGAACCAGCCCGGTGGCTGACCCTCGCCCGCCGCGGCTACCTG CACCCCGACATCGTGCCCAACACGGTCGCGGTCCTGATCTGGATCGCCTGGGGGCAGGTCGCGCTCGCCCTCCTCCGCGA GATCGCCGCCCAGTTCCAGCGCGGTGCGTCCGCCACCCGTACCGTGCTGCTTCCCGGTGTGGTCCAGCACCTCGCGGGCA GCTGGATCGCCTCCCTGTCGATCCTGTTCAGCCTCCTGGCTGGACGTTCCGCAATGGTCGCCGTGTCCCTCGACCTACCG GCCTCCCACCCGGCCGCGGGGAGCGTTCAGACCATCGCGGCGAACGCCGCTGAGCCCATGGGGGGACCGGCGCCCAGCAC CTCGGCAGGCAACGCGCTACCGGCGAACGGGATGCCGACCGAAGGAACCGATCCAGGCGGGACCACCTGGCGTCGGCACG TCGTGGCACCCGGCGAGACTCTGTGGGGCATCGTCGGCGGCGAGTACGACGACCTGGAACCAGACGCCTTCCCGCCGGCC GTCGCGGAGGTCTTCGAGACCAACCGCGGCACCACCGACTCGCTCGGCCGCGCCCTGGATCGGCCCGACCTGATCAACCC GGGTATGGAACTGCGGCTACCGCAGCTTTCCACGGGGCAGCTGCCTGGCGGGACCTATACGGCCCCGCAGCCCATCTCAC CGCCCGCTCCTGCCCCTGCGCCTGCTCCTCCTGCACCCACTCCCGCGCCTGCCAGCCCGGCGAGCCCAGCGAGCCCGAGG GCGTCAGCATCGCCGCCCGTCACTGTGCCCCACGACGTTCCCGCTGTTCCTCCCGGGGACGAACCAGAGGTGCCCCTCAG CACGTGGATCGGTGGCGCCGGTCTCCTCGCCACCACCCTCGTCGGCCTGTGGGCCGCGCGTCGACGCCGCCGCGACAGCA CCGTCACCCCGGCGCAGGAGATCCCCGACCCGGATCCGGCCACAGCCGCCCTGCACGCGGCTCTGCTGGACGCGGACGAC CCGGATCTCCTCGACCGACTCGACGCCGCCCTACGCAGCATCGGCGCGGCTCACCGTGATCAACCCGACGGGCCGAGCCC CCAGATCCTGCTCGTCCAACCGGACCAGAGCATCGAGGTTCTCCTTCATCCCGACGGCGCACAGACCCTGCCACCGCCAT GGGATGCCGGGCCCGATCCGCGGATCTGGACCCTGCCCGCCACCGCGGCGCTCACTGCCGCTGCGGACATCCCGCCACCT TGCCCGGCGCTGGTACAACTCGGCACGACCGCCGCGGGCGCGGCCCTGTACGCCGACCTCGAAGCCCTCGGCACCCTCGG CATCGCCACGAGCCCGACAGACCCCAACCGGCTGGCCGACTTCTGCCGGGCGATCCTTGCCGCGATCGTCGCCTCCCCTT GGGCCGATCTCACCACCGTGCGCACCGTCGGCCTCGACCCGCATGCCTTCGCCGCAGAGGAACGAGTCCAGGCAGCCAAG GACGTCACCGAGCTGACGGACGACGCTCGCGCCGAGGCCGCCGCCATCGACACCGTCCTGCGGGAGCGGGGCTACCCCAG CACGCTCAACGCCCGGATCGCCGAGCCGGGCGAGGAATTCGACCCGACCATCGCCCTCCTCGCCACTCACCTGGACACCG ACGCCGGCCGTACCGAAGCGGCCGACCTTGCCGCCGCGGCAGGCCATGGCCGGCGGGGGCTGGCCGTCGTCCTACCGGCC CAGCCCGACATCCTTACCGCGTGGATGCTGCGCCCCGACCCGGCCGGCCGCGGATCGCGCCTGGACCCCCTCGGCGTGCT CCTGACCCCGGTCGGGCTCACCGACACCGACGAAGCCGCCGTCGCCGCCTTCATCGCGGACGCGGAGGCACCTCCCATCG ACCTGCCTCCACCAGATCCGCCCGCCGAGACTCCTGCGGTGTTCGTCTCGCCGCCCTGGGAGGTGATGGTGCGCCTGCTC GGCCCCATCGACATCACCACCCGCGACGGCCGCACCCCGCCGCGGGCCGAGACCCGCGAACGCACCAACGAGGTCCTCGC CTGGCTGGTCACCCACCGGCACGGCACCCGCACCGATCTGGAATCCGCGCTCTGGCCGCGGGGAGCAAAATCCAAAACCC TGGCGAACGTGCTTGCCCGGGCACGGCGCCTGCTCATCAACCTCGTCGGTGAGGATGCGAAGAACTGGGTGCCCCGATAT GACCGCGGCCCCCTCACCCTCGACCCCCGGGTGGTCTCCGACCTGGACATTCTCCAAGCCCTCCTGCGCCACGCCATCGA CCAGCGTGATCACCACGAGACGGCGATCGCCACGCTGCAGGAGGCCCTCAAGCTGGTCAGAGGTGTGCCCGTCGGCTATC CGTGGCTGGATGCCCAGATGGGCTCGATCCTGACCACCGCCCCAGTCAACGCCGCGATCCTGCTCGCCGAACACCAGCTC GCCGCCGGCGACACCGCCGGCGTACTGGCGACCACCGCCCGAGGCATGGAAATCCTCCCGGCCCACACCACCCTGTTCGC GCTGCGAATGCGCGCCCACGCCGCCGCCGGCGACCCCGACGCGGTCAAAGCCGAATACCGCTCCTACCTCCGCGCCGAAA AGGCCGAACCCCTCTGGGACGGCGAAACCGACCGCGACCTCGAAGCCCTCCACTACAAGCTCACCCGCCGCCGCACAGCC GGATCCGGCTGA
Upstream 100 bases:
>100_bases GATTCCCATACTTTCCAGCGCTTCCGGGGCGGACATCACCCAGACCCGGTCCGCGACCGCCACGGCCGGACCCTGACGGA CGATCGTGAGGTTCGATGTG
Downstream 100 bases:
>100_bases ACCGGCGAACACTCAGCGGACTCAACGAAAGACCTCTGGACTCGGGTGGGGGTGCCGAAAGCGCCGAGTGGAGTCCACTG ACGTGGTGTACGGATCGTGA
Product: SARP family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 963; Mature: 963
Protein sequence:
>963_residues MRGHRPTGRHDLIPPRCTRRALRAGPAWLAVRVVGRAVLALAALTAFSMIPLVLWMWRDVPLPSTWEPARWLTLARRGYL HPDIVPNTVAVLIWIAWGQVALALLREIAAQFQRGASATRTVLLPGVVQHLAGSWIASLSILFSLLAGRSAMVAVSLDLP ASHPAAGSVQTIAANAAEPMGGPAPSTSAGNALPANGMPTEGTDPGGTTWRRHVVAPGETLWGIVGGEYDDLEPDAFPPA VAEVFETNRGTTDSLGRALDRPDLINPGMELRLPQLSTGQLPGGTYTAPQPISPPAPAPAPAPPAPTPAPASPASPASPR ASASPPVTVPHDVPAVPPGDEPEVPLSTWIGGAGLLATTLVGLWAARRRRRDSTVTPAQEIPDPDPATAALHAALLDADD PDLLDRLDAALRSIGAAHRDQPDGPSPQILLVQPDQSIEVLLHPDGAQTLPPPWDAGPDPRIWTLPATAALTAAADIPPP CPALVQLGTTAAGAALYADLEALGTLGIATSPTDPNRLADFCRAILAAIVASPWADLTTVRTVGLDPHAFAAEERVQAAK DVTELTDDARAEAAAIDTVLRERGYPSTLNARIAEPGEEFDPTIALLATHLDTDAGRTEAADLAAAAGHGRRGLAVVLPA QPDILTAWMLRPDPAGRGSRLDPLGVLLTPVGLTDTDEAAVAAFIADAEAPPIDLPPPDPPAETPAVFVSPPWEVMVRLL GPIDITTRDGRTPPRAETRERTNEVLAWLVTHRHGTRTDLESALWPRGAKSKTLANVLARARRLLINLVGEDAKNWVPRY DRGPLTLDPRVVSDLDILQALLRHAIDQRDHHETAIATLQEALKLVRGVPVGYPWLDAQMGSILTTAPVNAAILLAEHQL AAGDTAGVLATTARGMEILPAHTTLFALRMRAHAAAGDPDAVKAEYRSYLRAEKAEPLWDGETDRDLEALHYKLTRRRTA GSG
Sequences:
>Translated_963_residues MRGHRPTGRHDLIPPRCTRRALRAGPAWLAVRVVGRAVLALAALTAFSMIPLVLWMWRDVPLPSTWEPARWLTLARRGYL HPDIVPNTVAVLIWIAWGQVALALLREIAAQFQRGASATRTVLLPGVVQHLAGSWIASLSILFSLLAGRSAMVAVSLDLP ASHPAAGSVQTIAANAAEPMGGPAPSTSAGNALPANGMPTEGTDPGGTTWRRHVVAPGETLWGIVGGEYDDLEPDAFPPA VAEVFETNRGTTDSLGRALDRPDLINPGMELRLPQLSTGQLPGGTYTAPQPISPPAPAPAPAPPAPTPAPASPASPASPR ASASPPVTVPHDVPAVPPGDEPEVPLSTWIGGAGLLATTLVGLWAARRRRRDSTVTPAQEIPDPDPATAALHAALLDADD PDLLDRLDAALRSIGAAHRDQPDGPSPQILLVQPDQSIEVLLHPDGAQTLPPPWDAGPDPRIWTLPATAALTAAADIPPP CPALVQLGTTAAGAALYADLEALGTLGIATSPTDPNRLADFCRAILAAIVASPWADLTTVRTVGLDPHAFAAEERVQAAK DVTELTDDARAEAAAIDTVLRERGYPSTLNARIAEPGEEFDPTIALLATHLDTDAGRTEAADLAAAAGHGRRGLAVVLPA QPDILTAWMLRPDPAGRGSRLDPLGVLLTPVGLTDTDEAAVAAFIADAEAPPIDLPPPDPPAETPAVFVSPPWEVMVRLL GPIDITTRDGRTPPRAETRERTNEVLAWLVTHRHGTRTDLESALWPRGAKSKTLANVLARARRLLINLVGEDAKNWVPRY DRGPLTLDPRVVSDLDILQALLRHAIDQRDHHETAIATLQEALKLVRGVPVGYPWLDAQMGSILTTAPVNAAILLAEHQL AAGDTAGVLATTARGMEILPAHTTLFALRMRAHAAAGDPDAVKAEYRSYLRAEKAEPLWDGETDRDLEALHYKLTRRRTA GSG >Mature_963_residues MRGHRPTGRHDLIPPRCTRRALRAGPAWLAVRVVGRAVLALAALTAFSMIPLVLWMWRDVPLPSTWEPARWLTLARRGYL HPDIVPNTVAVLIWIAWGQVALALLREIAAQFQRGASATRTVLLPGVVQHLAGSWIASLSILFSLLAGRSAMVAVSLDLP ASHPAAGSVQTIAANAAEPMGGPAPSTSAGNALPANGMPTEGTDPGGTTWRRHVVAPGETLWGIVGGEYDDLEPDAFPPA VAEVFETNRGTTDSLGRALDRPDLINPGMELRLPQLSTGQLPGGTYTAPQPISPPAPAPAPAPPAPTPAPASPASPASPR ASASPPVTVPHDVPAVPPGDEPEVPLSTWIGGAGLLATTLVGLWAARRRRRDSTVTPAQEIPDPDPATAALHAALLDADD PDLLDRLDAALRSIGAAHRDQPDGPSPQILLVQPDQSIEVLLHPDGAQTLPPPWDAGPDPRIWTLPATAALTAAADIPPP CPALVQLGTTAAGAALYADLEALGTLGIATSPTDPNRLADFCRAILAAIVASPWADLTTVRTVGLDPHAFAAEERVQAAK DVTELTDDARAEAAAIDTVLRERGYPSTLNARIAEPGEEFDPTIALLATHLDTDAGRTEAADLAAAAGHGRRGLAVVLPA QPDILTAWMLRPDPAGRGSRLDPLGVLLTPVGLTDTDEAAVAAFIADAEAPPIDLPPPDPPAETPAVFVSPPWEVMVRLL GPIDITTRDGRTPPRAETRERTNEVLAWLVTHRHGTRTDLESALWPRGAKSKTLANVLARARRLLINLVGEDAKNWVPRY DRGPLTLDPRVVSDLDILQALLRHAIDQRDHHETAIATLQEALKLVRGVPVGYPWLDAQMGSILTTAPVNAAILLAEHQL AAGDTAGVLATTARGMEILPAHTTLFALRMRAHAAAGDPDAVKAEYRSYLRAEKAEPLWDGETDRDLEALHYKLTRRRTA GSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101717; Mature: 101717
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGHRPTGRHDLIPPRCTRRALRAGPAWLAVRVVGRAVLALAALTAFSMIPLVLWMWRDV CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLPSTWEPARWLTLARRGYLHPDIVPNTVAVLIWIAWGQVALALLREIAAQFQRGASATR CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH TVLLPGVVQHLAGSWIASLSILFSLLAGRSAMVAVSLDLPASHPAAGSVQTIAANAAEPM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCC GGPAPSTSAGNALPANGMPTEGTDPGGTTWRRHVVAPGETLWGIVGGEYDDLEPDAFPPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHH VAEVFETNRGTTDSLGRALDRPDLINPGMELRLPQLSTGQLPGGTYTAPQPISPPAPAPA HHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPPAPTPAPASPASPASPRASASPPVTVPHDVPAVPPGDEPEVPLSTWIGGAGLLATTL CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH VGLWAARRRRRDSTVTPAQEIPDPDPATAALHAALLDADDPDLLDRLDAALRSIGAAHRD HHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC QPDGPSPQILLVQPDQSIEVLLHPDGAQTLPPPWDAGPDPRIWTLPATAALTAAADIPPP CCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCC CPALVQLGTTAAGAALYADLEALGTLGIATSPTDPNRLADFCRAILAAIVASPWADLTTV CHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEE RTVGLDPHAFAAEERVQAAKDVTELTDDARAEAAAIDTVLRERGYPSTLNARIAEPGEEF EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHH DPTIALLATHLDTDAGRTEAADLAAAAGHGRRGLAVVLPAQPDILTAWMLRPDPAGRGSR CCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCC LDPLGVLLTPVGLTDTDEAAVAAFIADAEAPPIDLPPPDPPAETPAVFVSPPWEVMVRLL CCCCHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH GPIDITTRDGRTPPRAETRERTNEVLAWLVTHRHGTRTDLESALWPRGAKSKTLANVLAR CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHH ARRLLINLVGEDAKNWVPRYDRGPLTLDPRVVSDLDILQALLRHAIDQRDHHETAIATLQ HHHHHHHHHCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EALKLVRGVPVGYPWLDAQMGSILTTAPVNAAILLAEHQLAAGDTAGVLATTARGMEILP HHHHHHHCCCCCCCCHHHHHCCEEEECCCCEEEEEECCHHCCCCCCCHHHHHCCCCEEEC AHTTLFALRMRAHAAAGDPDAVKAEYRSYLRAEKAEPLWDGETDRDLEALHYKLTRRRTA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC GSG CCC >Mature Secondary Structure MRGHRPTGRHDLIPPRCTRRALRAGPAWLAVRVVGRAVLALAALTAFSMIPLVLWMWRDV CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLPSTWEPARWLTLARRGYLHPDIVPNTVAVLIWIAWGQVALALLREIAAQFQRGASATR CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH TVLLPGVVQHLAGSWIASLSILFSLLAGRSAMVAVSLDLPASHPAAGSVQTIAANAAEPM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCC GGPAPSTSAGNALPANGMPTEGTDPGGTTWRRHVVAPGETLWGIVGGEYDDLEPDAFPPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHH VAEVFETNRGTTDSLGRALDRPDLINPGMELRLPQLSTGQLPGGTYTAPQPISPPAPAPA HHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPPAPTPAPASPASPASPRASASPPVTVPHDVPAVPPGDEPEVPLSTWIGGAGLLATTL CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH VGLWAARRRRRDSTVTPAQEIPDPDPATAALHAALLDADDPDLLDRLDAALRSIGAAHRD HHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC QPDGPSPQILLVQPDQSIEVLLHPDGAQTLPPPWDAGPDPRIWTLPATAALTAAADIPPP CCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCC CPALVQLGTTAAGAALYADLEALGTLGIATSPTDPNRLADFCRAILAAIVASPWADLTTV CHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEE RTVGLDPHAFAAEERVQAAKDVTELTDDARAEAAAIDTVLRERGYPSTLNARIAEPGEEF EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHH DPTIALLATHLDTDAGRTEAADLAAAAGHGRRGLAVVLPAQPDILTAWMLRPDPAGRGSR CCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCC LDPLGVLLTPVGLTDTDEAAVAAFIADAEAPPIDLPPPDPPAETPAVFVSPPWEVMVRLL CCCCHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH GPIDITTRDGRTPPRAETRERTNEVLAWLVTHRHGTRTDLESALWPRGAKSKTLANVLAR CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHH ARRLLINLVGEDAKNWVPRYDRGPLTLDPRVVSDLDILQALLRHAIDQRDHHETAIATLQ HHHHHHHHHCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EALKLVRGVPVGYPWLDAQMGSILTTAPVNAAILLAEHQLAAGDTAGVLATTARGMEILP HHHHHHHCCCCCCCCHHHHHCCEEEECCCCEEEEEECCHHCCCCCCCHHHHHCCCCEEEC AHTTLFALRMRAHAAAGDPDAVKAEYRSYLRAEKAEPLWDGETDRDLEALHYKLTRRRTA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC GSG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA