Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313213

Identifier: 158313213

GI number: 158313213

Start: 1646827

End: 1649718

Strand: Direct

Name: 158313213

Synonym: Franean1_1367

Alternate gene names: NA

Gene position: 1646827-1649718 (Clockwise)

Preceding gene: 158313212

Following gene: 158313214

Centisome position: 18.33

GC content: 71.96

Gene sequence:

>2892_bases
ATGCGAGGTCACCGGCCGACCGGTCGCCACGATCTCATCCCACCGCGGTGCACCCGTCGAGCCTTGCGGGCCGGCCCCGC
GTGGTTGGCGGTACGTGTCGTCGGCCGAGCGGTGCTCGCGCTCGCCGCGCTGACAGCGTTCTCGATGATCCCGCTGGTGC
TGTGGATGTGGCGGGACGTCCCGCTGCCCTCCACCTGGGAACCAGCCCGGTGGCTGACCCTCGCCCGCCGCGGCTACCTG
CACCCCGACATCGTGCCCAACACGGTCGCGGTCCTGATCTGGATCGCCTGGGGGCAGGTCGCGCTCGCCCTCCTCCGCGA
GATCGCCGCCCAGTTCCAGCGCGGTGCGTCCGCCACCCGTACCGTGCTGCTTCCCGGTGTGGTCCAGCACCTCGCGGGCA
GCTGGATCGCCTCCCTGTCGATCCTGTTCAGCCTCCTGGCTGGACGTTCCGCAATGGTCGCCGTGTCCCTCGACCTACCG
GCCTCCCACCCGGCCGCGGGGAGCGTTCAGACCATCGCGGCGAACGCCGCTGAGCCCATGGGGGGACCGGCGCCCAGCAC
CTCGGCAGGCAACGCGCTACCGGCGAACGGGATGCCGACCGAAGGAACCGATCCAGGCGGGACCACCTGGCGTCGGCACG
TCGTGGCACCCGGCGAGACTCTGTGGGGCATCGTCGGCGGCGAGTACGACGACCTGGAACCAGACGCCTTCCCGCCGGCC
GTCGCGGAGGTCTTCGAGACCAACCGCGGCACCACCGACTCGCTCGGCCGCGCCCTGGATCGGCCCGACCTGATCAACCC
GGGTATGGAACTGCGGCTACCGCAGCTTTCCACGGGGCAGCTGCCTGGCGGGACCTATACGGCCCCGCAGCCCATCTCAC
CGCCCGCTCCTGCCCCTGCGCCTGCTCCTCCTGCACCCACTCCCGCGCCTGCCAGCCCGGCGAGCCCAGCGAGCCCGAGG
GCGTCAGCATCGCCGCCCGTCACTGTGCCCCACGACGTTCCCGCTGTTCCTCCCGGGGACGAACCAGAGGTGCCCCTCAG
CACGTGGATCGGTGGCGCCGGTCTCCTCGCCACCACCCTCGTCGGCCTGTGGGCCGCGCGTCGACGCCGCCGCGACAGCA
CCGTCACCCCGGCGCAGGAGATCCCCGACCCGGATCCGGCCACAGCCGCCCTGCACGCGGCTCTGCTGGACGCGGACGAC
CCGGATCTCCTCGACCGACTCGACGCCGCCCTACGCAGCATCGGCGCGGCTCACCGTGATCAACCCGACGGGCCGAGCCC
CCAGATCCTGCTCGTCCAACCGGACCAGAGCATCGAGGTTCTCCTTCATCCCGACGGCGCACAGACCCTGCCACCGCCAT
GGGATGCCGGGCCCGATCCGCGGATCTGGACCCTGCCCGCCACCGCGGCGCTCACTGCCGCTGCGGACATCCCGCCACCT
TGCCCGGCGCTGGTACAACTCGGCACGACCGCCGCGGGCGCGGCCCTGTACGCCGACCTCGAAGCCCTCGGCACCCTCGG
CATCGCCACGAGCCCGACAGACCCCAACCGGCTGGCCGACTTCTGCCGGGCGATCCTTGCCGCGATCGTCGCCTCCCCTT
GGGCCGATCTCACCACCGTGCGCACCGTCGGCCTCGACCCGCATGCCTTCGCCGCAGAGGAACGAGTCCAGGCAGCCAAG
GACGTCACCGAGCTGACGGACGACGCTCGCGCCGAGGCCGCCGCCATCGACACCGTCCTGCGGGAGCGGGGCTACCCCAG
CACGCTCAACGCCCGGATCGCCGAGCCGGGCGAGGAATTCGACCCGACCATCGCCCTCCTCGCCACTCACCTGGACACCG
ACGCCGGCCGTACCGAAGCGGCCGACCTTGCCGCCGCGGCAGGCCATGGCCGGCGGGGGCTGGCCGTCGTCCTACCGGCC
CAGCCCGACATCCTTACCGCGTGGATGCTGCGCCCCGACCCGGCCGGCCGCGGATCGCGCCTGGACCCCCTCGGCGTGCT
CCTGACCCCGGTCGGGCTCACCGACACCGACGAAGCCGCCGTCGCCGCCTTCATCGCGGACGCGGAGGCACCTCCCATCG
ACCTGCCTCCACCAGATCCGCCCGCCGAGACTCCTGCGGTGTTCGTCTCGCCGCCCTGGGAGGTGATGGTGCGCCTGCTC
GGCCCCATCGACATCACCACCCGCGACGGCCGCACCCCGCCGCGGGCCGAGACCCGCGAACGCACCAACGAGGTCCTCGC
CTGGCTGGTCACCCACCGGCACGGCACCCGCACCGATCTGGAATCCGCGCTCTGGCCGCGGGGAGCAAAATCCAAAACCC
TGGCGAACGTGCTTGCCCGGGCACGGCGCCTGCTCATCAACCTCGTCGGTGAGGATGCGAAGAACTGGGTGCCCCGATAT
GACCGCGGCCCCCTCACCCTCGACCCCCGGGTGGTCTCCGACCTGGACATTCTCCAAGCCCTCCTGCGCCACGCCATCGA
CCAGCGTGATCACCACGAGACGGCGATCGCCACGCTGCAGGAGGCCCTCAAGCTGGTCAGAGGTGTGCCCGTCGGCTATC
CGTGGCTGGATGCCCAGATGGGCTCGATCCTGACCACCGCCCCAGTCAACGCCGCGATCCTGCTCGCCGAACACCAGCTC
GCCGCCGGCGACACCGCCGGCGTACTGGCGACCACCGCCCGAGGCATGGAAATCCTCCCGGCCCACACCACCCTGTTCGC
GCTGCGAATGCGCGCCCACGCCGCCGCCGGCGACCCCGACGCGGTCAAAGCCGAATACCGCTCCTACCTCCGCGCCGAAA
AGGCCGAACCCCTCTGGGACGGCGAAACCGACCGCGACCTCGAAGCCCTCCACTACAAGCTCACCCGCCGCCGCACAGCC
GGATCCGGCTGA

Upstream 100 bases:

>100_bases
GATTCCCATACTTTCCAGCGCTTCCGGGGCGGACATCACCCAGACCCGGTCCGCGACCGCCACGGCCGGACCCTGACGGA
CGATCGTGAGGTTCGATGTG

Downstream 100 bases:

>100_bases
ACCGGCGAACACTCAGCGGACTCAACGAAAGACCTCTGGACTCGGGTGGGGGTGCCGAAAGCGCCGAGTGGAGTCCACTG
ACGTGGTGTACGGATCGTGA

Product: SARP family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 963; Mature: 963

Protein sequence:

>963_residues
MRGHRPTGRHDLIPPRCTRRALRAGPAWLAVRVVGRAVLALAALTAFSMIPLVLWMWRDVPLPSTWEPARWLTLARRGYL
HPDIVPNTVAVLIWIAWGQVALALLREIAAQFQRGASATRTVLLPGVVQHLAGSWIASLSILFSLLAGRSAMVAVSLDLP
ASHPAAGSVQTIAANAAEPMGGPAPSTSAGNALPANGMPTEGTDPGGTTWRRHVVAPGETLWGIVGGEYDDLEPDAFPPA
VAEVFETNRGTTDSLGRALDRPDLINPGMELRLPQLSTGQLPGGTYTAPQPISPPAPAPAPAPPAPTPAPASPASPASPR
ASASPPVTVPHDVPAVPPGDEPEVPLSTWIGGAGLLATTLVGLWAARRRRRDSTVTPAQEIPDPDPATAALHAALLDADD
PDLLDRLDAALRSIGAAHRDQPDGPSPQILLVQPDQSIEVLLHPDGAQTLPPPWDAGPDPRIWTLPATAALTAAADIPPP
CPALVQLGTTAAGAALYADLEALGTLGIATSPTDPNRLADFCRAILAAIVASPWADLTTVRTVGLDPHAFAAEERVQAAK
DVTELTDDARAEAAAIDTVLRERGYPSTLNARIAEPGEEFDPTIALLATHLDTDAGRTEAADLAAAAGHGRRGLAVVLPA
QPDILTAWMLRPDPAGRGSRLDPLGVLLTPVGLTDTDEAAVAAFIADAEAPPIDLPPPDPPAETPAVFVSPPWEVMVRLL
GPIDITTRDGRTPPRAETRERTNEVLAWLVTHRHGTRTDLESALWPRGAKSKTLANVLARARRLLINLVGEDAKNWVPRY
DRGPLTLDPRVVSDLDILQALLRHAIDQRDHHETAIATLQEALKLVRGVPVGYPWLDAQMGSILTTAPVNAAILLAEHQL
AAGDTAGVLATTARGMEILPAHTTLFALRMRAHAAAGDPDAVKAEYRSYLRAEKAEPLWDGETDRDLEALHYKLTRRRTA
GSG

Sequences:

>Translated_963_residues
MRGHRPTGRHDLIPPRCTRRALRAGPAWLAVRVVGRAVLALAALTAFSMIPLVLWMWRDVPLPSTWEPARWLTLARRGYL
HPDIVPNTVAVLIWIAWGQVALALLREIAAQFQRGASATRTVLLPGVVQHLAGSWIASLSILFSLLAGRSAMVAVSLDLP
ASHPAAGSVQTIAANAAEPMGGPAPSTSAGNALPANGMPTEGTDPGGTTWRRHVVAPGETLWGIVGGEYDDLEPDAFPPA
VAEVFETNRGTTDSLGRALDRPDLINPGMELRLPQLSTGQLPGGTYTAPQPISPPAPAPAPAPPAPTPAPASPASPASPR
ASASPPVTVPHDVPAVPPGDEPEVPLSTWIGGAGLLATTLVGLWAARRRRRDSTVTPAQEIPDPDPATAALHAALLDADD
PDLLDRLDAALRSIGAAHRDQPDGPSPQILLVQPDQSIEVLLHPDGAQTLPPPWDAGPDPRIWTLPATAALTAAADIPPP
CPALVQLGTTAAGAALYADLEALGTLGIATSPTDPNRLADFCRAILAAIVASPWADLTTVRTVGLDPHAFAAEERVQAAK
DVTELTDDARAEAAAIDTVLRERGYPSTLNARIAEPGEEFDPTIALLATHLDTDAGRTEAADLAAAAGHGRRGLAVVLPA
QPDILTAWMLRPDPAGRGSRLDPLGVLLTPVGLTDTDEAAVAAFIADAEAPPIDLPPPDPPAETPAVFVSPPWEVMVRLL
GPIDITTRDGRTPPRAETRERTNEVLAWLVTHRHGTRTDLESALWPRGAKSKTLANVLARARRLLINLVGEDAKNWVPRY
DRGPLTLDPRVVSDLDILQALLRHAIDQRDHHETAIATLQEALKLVRGVPVGYPWLDAQMGSILTTAPVNAAILLAEHQL
AAGDTAGVLATTARGMEILPAHTTLFALRMRAHAAAGDPDAVKAEYRSYLRAEKAEPLWDGETDRDLEALHYKLTRRRTA
GSG
>Mature_963_residues
MRGHRPTGRHDLIPPRCTRRALRAGPAWLAVRVVGRAVLALAALTAFSMIPLVLWMWRDVPLPSTWEPARWLTLARRGYL
HPDIVPNTVAVLIWIAWGQVALALLREIAAQFQRGASATRTVLLPGVVQHLAGSWIASLSILFSLLAGRSAMVAVSLDLP
ASHPAAGSVQTIAANAAEPMGGPAPSTSAGNALPANGMPTEGTDPGGTTWRRHVVAPGETLWGIVGGEYDDLEPDAFPPA
VAEVFETNRGTTDSLGRALDRPDLINPGMELRLPQLSTGQLPGGTYTAPQPISPPAPAPAPAPPAPTPAPASPASPASPR
ASASPPVTVPHDVPAVPPGDEPEVPLSTWIGGAGLLATTLVGLWAARRRRRDSTVTPAQEIPDPDPATAALHAALLDADD
PDLLDRLDAALRSIGAAHRDQPDGPSPQILLVQPDQSIEVLLHPDGAQTLPPPWDAGPDPRIWTLPATAALTAAADIPPP
CPALVQLGTTAAGAALYADLEALGTLGIATSPTDPNRLADFCRAILAAIVASPWADLTTVRTVGLDPHAFAAEERVQAAK
DVTELTDDARAEAAAIDTVLRERGYPSTLNARIAEPGEEFDPTIALLATHLDTDAGRTEAADLAAAAGHGRRGLAVVLPA
QPDILTAWMLRPDPAGRGSRLDPLGVLLTPVGLTDTDEAAVAAFIADAEAPPIDLPPPDPPAETPAVFVSPPWEVMVRLL
GPIDITTRDGRTPPRAETRERTNEVLAWLVTHRHGTRTDLESALWPRGAKSKTLANVLARARRLLINLVGEDAKNWVPRY
DRGPLTLDPRVVSDLDILQALLRHAIDQRDHHETAIATLQEALKLVRGVPVGYPWLDAQMGSILTTAPVNAAILLAEHQL
AAGDTAGVLATTARGMEILPAHTTLFALRMRAHAAAGDPDAVKAEYRSYLRAEKAEPLWDGETDRDLEALHYKLTRRRTA
GSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101717; Mature: 101717

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGHRPTGRHDLIPPRCTRRALRAGPAWLAVRVVGRAVLALAALTAFSMIPLVLWMWRDV
CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLPSTWEPARWLTLARRGYLHPDIVPNTVAVLIWIAWGQVALALLREIAAQFQRGASATR
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TVLLPGVVQHLAGSWIASLSILFSLLAGRSAMVAVSLDLPASHPAAGSVQTIAANAAEPM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCC
GGPAPSTSAGNALPANGMPTEGTDPGGTTWRRHVVAPGETLWGIVGGEYDDLEPDAFPPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHH
VAEVFETNRGTTDSLGRALDRPDLINPGMELRLPQLSTGQLPGGTYTAPQPISPPAPAPA
HHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPPAPTPAPASPASPASPRASASPPVTVPHDVPAVPPGDEPEVPLSTWIGGAGLLATTL
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH
VGLWAARRRRRDSTVTPAQEIPDPDPATAALHAALLDADDPDLLDRLDAALRSIGAAHRD
HHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
QPDGPSPQILLVQPDQSIEVLLHPDGAQTLPPPWDAGPDPRIWTLPATAALTAAADIPPP
CCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCC
CPALVQLGTTAAGAALYADLEALGTLGIATSPTDPNRLADFCRAILAAIVASPWADLTTV
CHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEE
RTVGLDPHAFAAEERVQAAKDVTELTDDARAEAAAIDTVLRERGYPSTLNARIAEPGEEF
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHH
DPTIALLATHLDTDAGRTEAADLAAAAGHGRRGLAVVLPAQPDILTAWMLRPDPAGRGSR
CCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCC
LDPLGVLLTPVGLTDTDEAAVAAFIADAEAPPIDLPPPDPPAETPAVFVSPPWEVMVRLL
CCCCHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH
GPIDITTRDGRTPPRAETRERTNEVLAWLVTHRHGTRTDLESALWPRGAKSKTLANVLAR
CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHH
ARRLLINLVGEDAKNWVPRYDRGPLTLDPRVVSDLDILQALLRHAIDQRDHHETAIATLQ
HHHHHHHHHCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EALKLVRGVPVGYPWLDAQMGSILTTAPVNAAILLAEHQLAAGDTAGVLATTARGMEILP
HHHHHHHCCCCCCCCHHHHHCCEEEECCCCEEEEEECCHHCCCCCCCHHHHHCCCCEEEC
AHTTLFALRMRAHAAAGDPDAVKAEYRSYLRAEKAEPLWDGETDRDLEALHYKLTRRRTA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
GSG
CCC
>Mature Secondary Structure
MRGHRPTGRHDLIPPRCTRRALRAGPAWLAVRVVGRAVLALAALTAFSMIPLVLWMWRDV
CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLPSTWEPARWLTLARRGYLHPDIVPNTVAVLIWIAWGQVALALLREIAAQFQRGASATR
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
TVLLPGVVQHLAGSWIASLSILFSLLAGRSAMVAVSLDLPASHPAAGSVQTIAANAAEPM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCC
GGPAPSTSAGNALPANGMPTEGTDPGGTTWRRHVVAPGETLWGIVGGEYDDLEPDAFPPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHH
VAEVFETNRGTTDSLGRALDRPDLINPGMELRLPQLSTGQLPGGTYTAPQPISPPAPAPA
HHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPPAPTPAPASPASPASPRASASPPVTVPHDVPAVPPGDEPEVPLSTWIGGAGLLATTL
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH
VGLWAARRRRRDSTVTPAQEIPDPDPATAALHAALLDADDPDLLDRLDAALRSIGAAHRD
HHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
QPDGPSPQILLVQPDQSIEVLLHPDGAQTLPPPWDAGPDPRIWTLPATAALTAAADIPPP
CCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCC
CPALVQLGTTAAGAALYADLEALGTLGIATSPTDPNRLADFCRAILAAIVASPWADLTTV
CHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEE
RTVGLDPHAFAAEERVQAAKDVTELTDDARAEAAAIDTVLRERGYPSTLNARIAEPGEEF
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHH
DPTIALLATHLDTDAGRTEAADLAAAAGHGRRGLAVVLPAQPDILTAWMLRPDPAGRGSR
CCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCC
LDPLGVLLTPVGLTDTDEAAVAAFIADAEAPPIDLPPPDPPAETPAVFVSPPWEVMVRLL
CCCCHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH
GPIDITTRDGRTPPRAETRERTNEVLAWLVTHRHGTRTDLESALWPRGAKSKTLANVLAR
CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHH
ARRLLINLVGEDAKNWVPRYDRGPLTLDPRVVSDLDILQALLRHAIDQRDHHETAIATLQ
HHHHHHHHHCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EALKLVRGVPVGYPWLDAQMGSILTTAPVNAAILLAEHQLAAGDTAGVLATTARGMEILP
HHHHHHHCCCCCCCCHHHHHCCEEEECCCCEEEEEECCHHCCCCCCCHHHHHCCCCEEEC
AHTTLFALRMRAHAAAGDPDAVKAEYRSYLRAEKAEPLWDGETDRDLEALHYKLTRRRTA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
GSG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA