| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313205
Identifier: 158313205
GI number: 158313205
Start: 1641121
End: 1641888
Strand: Direct
Name: 158313205
Synonym: Franean1_1359
Alternate gene names: NA
Gene position: 1641121-1641888 (Clockwise)
Preceding gene: 158313204
Following gene: 158313206
Centisome position: 18.27
GC content: 73.44
Gene sequence:
>768_bases ATGACGGGCTGCTGGGCGGTGGCGACGGCGGGGCCGGGATCGGCCGGCGCGACCACCTTGACCCTGGCATTGGCACACGC CACATACGGCGTCGCGATAGAGGCGAACCCGGACGGCGGCGTGCTCGCCGCCCGCCTCGGGCTGTCGCTGGGCACCTCCT CGCCCGGCCTGGACACCCTGGTGGCTGAACTGGGGACGGCGGACGATTCCGCCTCCGTCCTGGAACACGCCCAGCGGTGC GCGAGCGGCCTGCCCGTCGTCGCCTGCGCCCCCACGGAGGAGACCGCCGCCGGCGCGGTGCGGAGCCTGGCCGGGATGAT GCCCCTGCTGCGGATGCTGGCCGTGGAGCACTTTCTTGCCATGGACATCGGCCGGTTTCGCACGCAGGCGTCGCGGCCGC TGGTCGACGGCTGCGACGGCCTGGTGCTCGTCACGCTGGCGGCGACAGAGGGGCTGGCGTGCACCCTGCTGCGCCTGCCG AGCGTGCTGGCGTCGGTGCCGCGCCTCGTGCTGGCCGTCCGTGGAGCCAGCCCGTACTCGACGGGAGAGATCACCCGGTC GGCCCGTCACCGGGCGGGGGTCGAGGTGCCGGTGGTGGCGATACCAGACGATCCCCGAGGCATGGCGGCGCTGACCAGAC AGGGCAGAAGGCGCCGCCGTCCCTCACCGCTGCTGCGATCGGCCTGGGACCTGATGGACCTGCTCACCGTTCTCGGTGCT CCGCCGGACGTCACCGGATCAGCGGAATCCGCCGGAGCGGCGGGATGA
Upstream 100 bases:
>100_bases ACACAGTGGTGTATCTGGACGCGCCCGCGGACGCCGCCGCGTGGATCGCCACGGCGTCCGCGCAGTCACCGCAGAAGCTG CGGCTGCTGGGGGTGCGACG
Downstream 100 bases:
>100_bases ACCGGATCCCGGGAACCGCACCGGCGGTGAACACGCCGGCCGTGAACGCGGCGACCGTGACCGCGGTCGCGGACAGCCTG CGGGAGTGGCTGCTCACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTGCWAVATAGPGSAGATTLTLALAHATYGVAIEANPDGGVLAARLGLSLGTSSPGLDTLVAELGTADDSASVLEHAQRC ASGLPVVACAPTEETAAGAVRSLAGMMPLLRMLAVEHFLAMDIGRFRTQASRPLVDGCDGLVLVTLAATEGLACTLLRLP SVLASVPRLVLAVRGASPYSTGEITRSARHRAGVEVPVVAIPDDPRGMAALTRQGRRRRRPSPLLRSAWDLMDLLTVLGA PPDVTGSAESAGAAG
Sequences:
>Translated_255_residues MTGCWAVATAGPGSAGATTLTLALAHATYGVAIEANPDGGVLAARLGLSLGTSSPGLDTLVAELGTADDSASVLEHAQRC ASGLPVVACAPTEETAAGAVRSLAGMMPLLRMLAVEHFLAMDIGRFRTQASRPLVDGCDGLVLVTLAATEGLACTLLRLP SVLASVPRLVLAVRGASPYSTGEITRSARHRAGVEVPVVAIPDDPRGMAALTRQGRRRRRPSPLLRSAWDLMDLLTVLGA PPDVTGSAESAGAAG >Mature_254_residues TGCWAVATAGPGSAGATTLTLALAHATYGVAIEANPDGGVLAARLGLSLGTSSPGLDTLVAELGTADDSASVLEHAQRCA SGLPVVACAPTEETAAGAVRSLAGMMPLLRMLAVEHFLAMDIGRFRTQASRPLVDGCDGLVLVTLAATEGLACTLLRLPS VLASVPRLVLAVRGASPYSTGEITRSARHRAGVEVPVVAIPDDPRGMAALTRQGRRRRRPSPLLRSAWDLMDLLTVLGAP PDVTGSAESAGAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25876; Mature: 25745
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGCWAVATAGPGSAGATTLTLALAHATYGVAIEANPDGGVLAARLGLSLGTSSPGLDTL CCCCEEEEECCCCCCCHHHHHHHHHHHHEEEEEEECCCCCEEHHHHCCCCCCCCCCHHHH VAELGTADDSASVLEHAQRCASGLPVVACAPTEETAAGAVRSLAGMMPLLRMLAVEHFLA HHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MDIGRFRTQASRPLVDGCDGLVLVTLAATEGLACTLLRLPSVLASVPRLVLAVRGASPYS HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TGEITRSARHRAGVEVPVVAIPDDPRGMAALTRQGRRRRRPSPLLRSAWDLMDLLTVLGA HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC PPDVTGSAESAGAAG CCCCCCCCCCCCCCC >Mature Secondary Structure TGCWAVATAGPGSAGATTLTLALAHATYGVAIEANPDGGVLAARLGLSLGTSSPGLDTL CCCEEEEECCCCCCCHHHHHHHHHHHHEEEEEEECCCCCEEHHHHCCCCCCCCCCHHHH VAELGTADDSASVLEHAQRCASGLPVVACAPTEETAAGAVRSLAGMMPLLRMLAVEHFLA HHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MDIGRFRTQASRPLVDGCDGLVLVTLAATEGLACTLLRLPSVLASVPRLVLAVRGASPYS HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TGEITRSARHRAGVEVPVVAIPDDPRGMAALTRQGRRRRRPSPLLRSAWDLMDLLTVLGA HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC PPDVTGSAESAGAAG CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA