| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313184
Identifier: 158313184
GI number: 158313184
Start: 1606408
End: 1607238
Strand: Direct
Name: 158313184
Synonym: Franean1_1334
Alternate gene names: NA
Gene position: 1606408-1607238 (Clockwise)
Preceding gene: 158313183
Following gene: 158313185
Centisome position: 17.88
GC content: 70.16
Gene sequence:
>831_bases ATGAGCACTCTTGACATCGAGTCCGCCTGGTGCGGGATGACCGTGTGGTGCCAGGACTGGCGGGCCGCGGAACACCTGGG GGTCACCCAACTGGCGCCACTGCTCACCGCGGCGGAACAGACGGACGGGATCAGCCTGTGGTGGTTCACCAGAAAGTCCG CCTCCTGGCGGATCCGCTGGTGTCCTGGCCCAGGCGAGGCCGGACTGACCCCGATGGCGCTCGGCGAACAAATTCTTCGC GGCCGGCTCGCCGGCACCGCGATCAACCGCTGGGCGCCTGCTGTCTACGAGCCCGAGACCCACGTCTTCGGTGGCTCCGC CGGCATGGACGTCGCGCACCTGCTCTTCCATGCCGACAGCCGCAGCATCCTCGCCCACCTCGGCAAGGCCCACCCCGACC ACCGTCACGAGGTGGGACTCGTGCTGGCCACGGCGCTCCTGAAAGCCGCCGGCCAGGACTTCTACGAACAGGGCGACATC TGGACTCGCGTCGCCGACCACCGCCGCACCAGCCAGGTCCGCCAACGGCAGCCCGCTGCCGCACCGACCGCCCAGGCCGC CGTGCACCGACTCCTCACCGCCCGCACAGTCCGGCCCCTCGAAGCGCTGCCGGAGTGGCCAGCAGCGTTCCGGCACGCTG GGCACTCACTTGCGAGCCTCGCCAACCAGGGCCAGCTCACCCGCGGCATCCGCGCAGTACTCGCACATCACATCCTGTTC GCCTGGAACCGCCTCGGCATCCCCGCCGCCAACCAGGCGCAGCTGGCCCACACCGCCGCCCACATCGTCTTCCACGACAG CCACCCGGTCCCGACCCCCGACGAACGGTAA
Upstream 100 bases:
>100_bases TCCTGCATGCCGTGGCGACCAACACCACCACAGCCTGGGAGTCCGCCCTCCTGCTCGACCTCCCCCCGGCTTGGCCGGCA GGGGACCGGGGAGCCGAAGC
Downstream 100 bases:
>100_bases CCACGATGACCACCCGCACCCCCGAGCAGCTCCGCGACGACCTGGTCGCCCACATCCGCCGCTGGGGCACCTTCCGCACC GGTCAGGTCGAAGCCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide; Protein-L-Isoaspartate(D-Aspartate) O-Methyltransferase; Protein-L-Isoaspartate(D-Aspartate)O-Methyltransferase; Protein Signal Peptide
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSTLDIESAWCGMTVWCQDWRAAEHLGVTQLAPLLTAAEQTDGISLWWFTRKSASWRIRWCPGPGEAGLTPMALGEQILR GRLAGTAINRWAPAVYEPETHVFGGSAGMDVAHLLFHADSRSILAHLGKAHPDHRHEVGLVLATALLKAAGQDFYEQGDI WTRVADHRRTSQVRQRQPAAAPTAQAAVHRLLTARTVRPLEALPEWPAAFRHAGHSLASLANQGQLTRGIRAVLAHHILF AWNRLGIPAANQAQLAHTAAHIVFHDSHPVPTPDER
Sequences:
>Translated_276_residues MSTLDIESAWCGMTVWCQDWRAAEHLGVTQLAPLLTAAEQTDGISLWWFTRKSASWRIRWCPGPGEAGLTPMALGEQILR GRLAGTAINRWAPAVYEPETHVFGGSAGMDVAHLLFHADSRSILAHLGKAHPDHRHEVGLVLATALLKAAGQDFYEQGDI WTRVADHRRTSQVRQRQPAAAPTAQAAVHRLLTARTVRPLEALPEWPAAFRHAGHSLASLANQGQLTRGIRAVLAHHILF AWNRLGIPAANQAQLAHTAAHIVFHDSHPVPTPDER >Mature_275_residues STLDIESAWCGMTVWCQDWRAAEHLGVTQLAPLLTAAEQTDGISLWWFTRKSASWRIRWCPGPGEAGLTPMALGEQILRG RLAGTAINRWAPAVYEPETHVFGGSAGMDVAHLLFHADSRSILAHLGKAHPDHRHEVGLVLATALLKAAGQDFYEQGDIW TRVADHRRTSQVRQRQPAAAPTAQAAVHRLLTARTVRPLEALPEWPAAFRHAGHSLASLANQGQLTRGIRAVLAHHILFA WNRLGIPAANQAQLAHTAAHIVFHDSHPVPTPDER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30285; Mature: 30154
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLDIESAWCGMTVWCQDWRAAEHLGVTQLAPLLTAAEQTDGISLWWFTRKSASWRIRW CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEE CPGPGEAGLTPMALGEQILRGRLAGTAINRWAPAVYEPETHVFGGSAGMDVAHLLFHADS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC RSILAHLGKAHPDHRHEVGLVLATALLKAAGQDFYEQGDIWTRVADHRRTSQVRQRQPAA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHCCCCC APTAQAAVHRLLTARTVRPLEALPEWPAAFRHAGHSLASLANQGQLTRGIRAVLAHHILF CCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH AWNRLGIPAANQAQLAHTAAHIVFHDSHPVPTPDER HHHHCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCC >Mature Secondary Structure STLDIESAWCGMTVWCQDWRAAEHLGVTQLAPLLTAAEQTDGISLWWFTRKSASWRIRW CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEE CPGPGEAGLTPMALGEQILRGRLAGTAINRWAPAVYEPETHVFGGSAGMDVAHLLFHADS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC RSILAHLGKAHPDHRHEVGLVLATALLKAAGQDFYEQGDIWTRVADHRRTSQVRQRQPAA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHCCCCC APTAQAAVHRLLTARTVRPLEALPEWPAAFRHAGHSLASLANQGQLTRGIRAVLAHHILF CCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH AWNRLGIPAANQAQLAHTAAHIVFHDSHPVPTPDER HHHHCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA