Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158313112

Identifier: 158313112

GI number: 158313112

Start: 1518135

End: 1518290

Strand: Direct

Name: 158313112

Synonym: Franean1_1260

Alternate gene names: NA

Gene position: 1518135-1518290 (Clockwise)

Preceding gene: 158313110

Following gene: 158313122

Centisome position: 16.9

GC content: 76.28

Gene sequence:

>156_bases
GTGCGGGTGTCGGACAGGAGGCCGGCCGTGAAGGATCTCGACGCGCAGGTGGCCCGGCTGGCGGCCGTGGGTCCCGGCGA
GGTGCCGGACGCCGAGCTCGCCCTGCTGGTGACGGACGTGCGCCGGCTCGTCGACGCCACCGACGGGCGGGTCTGA

Upstream 100 bases:

>100_bases
GGCGGGGCAGGGGCCGCCGGTAGGGCAGGCCCTGTCGGCAGGGCCTGCGAGGTGGCGGGCGCGTGGGGTGGCGCCGCACA
CGGGGCGTCCAGTGAGTGGA

Downstream 100 bases:

>100_bases
GCCCCCTGGGTCGTGACGGGCCCACTCGCCGGGCGGGTCCGGTGGGCCGCGACGGCGTCCGGTGGCGAGGCCCGGGAGCA
CGGGCCGGAGGGCGACAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MRVSDRRPAVKDLDAQVARLAAVGPGEVPDAELALLVTDVRRLVDATDGRV

Sequences:

>Translated_51_residues
MRVSDRRPAVKDLDAQVARLAAVGPGEVPDAELALLVTDVRRLVDATDGRV
>Mature_51_residues
MRVSDRRPAVKDLDAQVARLAAVGPGEVPDAELALLVTDVRRLVDATDGRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5454; Mature: 5454

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSDRRPAVKDLDAQVARLAAVGPGEVPDAELALLVTDVRRLVDATDGRV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRVSDRRPAVKDLDAQVARLAAVGPGEVPDAELALLVTDVRRLVDATDGRV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA