Click here to switch to the map view.

The map label for this gene is 158313085

Identifier: 158313085

GI number: 158313085

Start: 1475853

End: 1476353

Strand: Direct

Name: 158313085

Synonym: Franean1_1233

Alternate gene names: NA

Gene position: 1475853-1476353 (Clockwise)

Preceding gene: 158313083

Following gene: 158313086

Centisome position: 16.43

GC content: 76.65

Gene sequence:

>501_bases
ATGTGGTGGCGTGAGGCAGCCGTCGGGTTGGTCGCGGCCGGGTCGGCCGCCGCGGCTCCCGGGCCGCGTCCCGGGCCGCG
TCCCGGGCCGCGTCCTGGGCCGAGCGGGCAGTCCCAGCCCCAGCGTCCCCGGCCTCAGCCCCACGCCCGGCCTGAGCCTC
GACCTCGGGCCGGGTCCCGGTCGCGGGCCGGTGGGCGGGGGAGGTCGGGTGCGCGGCCGCCGCTGCGGCTGACCAGGCGC
GGCCGCATCGTCGTGGTGGCGCTGGCGAGCACGCTCCTCGGCCTTGTCTTCTCGTTGGTGCTGGTGACGGCGTCACAGGC
GTTCACCGGCGTCCCGGTGAGCTACCGGACGCACGTCGTGCGGTCCGGGGAGACACTCTGGGAGATCGCCCACGAGGCCG
CCCCCGAGGCCGACACCCGCGACACCGTCCGCGGGCTCATGACCCTGAACGGCCTCGACACGGTGACGCTCATGCCCGGT
CAGGAGCTCCGGCTCCCCTGA

Upstream 100 bases:

>100_bases
TGGTCTCTCGGGGGCTGCTCCGGCCGCCATGGCGCCGCCTGGTGAGTCCAGGCGGGGCGGTGCGCGGCGATCCGGGGCGT
CCGTGATCGAGATGCCCGGC

Downstream 100 bases:

>100_bases
CCCGGCTTTCCTGCTGCGGCCCCAATGTCCCAATGTCCCAATGTCCCGATGGCTCGATGCCCCGATAGCTCGGCGGTCCG
GCATGCCCTGTGCCCTCGGT

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MWWREAAVGLVAAGSAAAAPGPRPGPRPGPRPGPSGQSQPQRPRPQPHARPEPRPRAGSRSRAGGRGRSGARPPLRLTRR
GRIVVVALASTLLGLVFSLVLVTASQAFTGVPVSYRTHVVRSGETLWEIAHEAAPEADTRDTVRGLMTLNGLDTVTLMPG
QELRLP

Sequences:

>Translated_166_residues
MWWREAAVGLVAAGSAAAAPGPRPGPRPGPRPGPSGQSQPQRPRPQPHARPEPRPRAGSRSRAGGRGRSGARPPLRLTRR
GRIVVVALASTLLGLVFSLVLVTASQAFTGVPVSYRTHVVRSGETLWEIAHEAAPEADTRDTVRGLMTLNGLDTVTLMPG
QELRLP
>Mature_166_residues
MWWREAAVGLVAAGSAAAAPGPRPGPRPGPRPGPSGQSQPQRPRPQPHARPEPRPRAGSRSRAGGRGRSGARPPLRLTRR
GRIVVVALASTLLGLVFSLVLVTASQAFTGVPVSYRTHVVRSGETLWEIAHEAAPEADTRDTVRGLMTLNGLDTVTLMPG
QELRLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17603; Mature: 17603

Theoretical pI: Translated: 12.46; Mature: 12.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWWREAAVGLVAAGSAAAAPGPRPGPRPGPRPGPSGQSQPQRPRPQPHARPEPRPRAGSR
CCHHHHHHHEHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SRAGGRGRSGARPPLRLTRRGRIVVVALASTLLGLVFSLVLVTASQAFTGVPVSYRTHVV
CCCCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEE
RSGETLWEIAHEAAPEADTRDTVRGLMTLNGLDTVTLMPGQELRLP
CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MWWREAAVGLVAAGSAAAAPGPRPGPRPGPRPGPSGQSQPQRPRPQPHARPEPRPRAGSR
CCHHHHHHHEHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SRAGGRGRSGARPPLRLTRRGRIVVVALASTLLGLVFSLVLVTASQAFTGVPVSYRTHVV
CCCCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEE
RSGETLWEIAHEAAPEADTRDTVRGLMTLNGLDTVTLMPGQELRLP
CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA