Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313066

Identifier: 158313066

GI number: 158313066

Start: 1449572

End: 1449979

Strand: Direct

Name: 158313066

Synonym: Franean1_1214

Alternate gene names: NA

Gene position: 1449572-1449979 (Clockwise)

Preceding gene: 158313064

Following gene: 158313067

Centisome position: 16.14

GC content: 67.89

Gene sequence:

>408_bases
ATGGTGGGCGCGGGTGGTGTCTACGACCTTGGGTATCGCAGGGTGTGGTGCCCGAAGTTCCGCCGCCCTGTGCTCGCTGG
TCCCGTCGGTGACCGCTGTGCGGAGCTGGTCCGGCGGAAGTGCGCCGGGCATAAGTGGATGGTCGTTGCGTGGGAGGTCA
TGCCCGACCATGTGCACCTGTTCGTCAAGGCTCACCCGAAGCACTCCCCGTCGTCTGTCGCCAACCCGCTCAAGGGGTTG
ACGTCCCGGGTGCTGCGCGTGGAGTTCGGGCATCTGTGTTCCCGGTTGCCGGCCATGTGGTCGCGGTCGTACTTCGCCGC
CACCGTCGGCGTGGTGTCCGCTGAGACTGTCCGCCGGTACGTCGACACCCAGGACGAGTGGCCGTGGCGTGTGGAGCGGG
CCCGGTGA

Upstream 100 bases:

>100_bases
TCCCGAGGGGGCTGGCGCCTTCAGACGTCAGGGGAGTCGGGCACGGAACGTAACCGTATGTGTGCATCGCTGGTATGTTC
GGATCATGGTTCGGGGGGTG

Downstream 100 bases:

>100_bases
GGCGGGCGTTCAAGTTCCTGCTCCGCCCGACGGCGCGGCAGGCCACCGCGCTGACGGCGATGATCGATGATCATCGGGCG
CTCTACAACGCCGCGTTGCA

Product: transposase IS200-family protein

Products: NA

Alternate protein names: Transposase IS; Transposase-Related Protein; Transposase OrfA For Insertion Sequence Element; Transposase OrfA; Transposase And Inactivated Derivatives; IS Element ISTsi3 OrfA-Like Probably Transposase; ISChy9 Transposase OrfA; ISSoc6 OrfA Transposase; Transposase-Family Protein; Transposase Related Protein; ISSoc3 OrfA Transposase; ISCpe2 Transposase OrfA; IS Element ISDka2 OrfA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MVGAGGVYDLGYRRVWCPKFRRPVLAGPVGDRCAELVRRKCAGHKWMVVAWEVMPDHVHLFVKAHPKHSPSSVANPLKGL
TSRVLRVEFGHLCSRLPAMWSRSYFAATVGVVSAETVRRYVDTQDEWPWRVERAR

Sequences:

>Translated_135_residues
MVGAGGVYDLGYRRVWCPKFRRPVLAGPVGDRCAELVRRKCAGHKWMVVAWEVMPDHVHLFVKAHPKHSPSSVANPLKGL
TSRVLRVEFGHLCSRLPAMWSRSYFAATVGVVSAETVRRYVDTQDEWPWRVERAR
>Mature_135_residues
MVGAGGVYDLGYRRVWCPKFRRPVLAGPVGDRCAELVRRKCAGHKWMVVAWEVMPDHVHLFVKAHPKHSPSSVANPLKGL
TSRVLRVEFGHLCSRLPAMWSRSYFAATVGVVSAETVRRYVDTQDEWPWRVERAR

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15397; Mature: 15397

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGAGGVYDLGYRRVWCPKFRRPVLAGPVGDRCAELVRRKCAGHKWMVVAWEVMPDHVHL
CCCCCCCCCCCCCEECCHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCEEEE
FVKAHPKHSPSSVANPLKGLTSRVLRVEFGHLCSRLPAMWSRSYFAATVGVVSAETVRRY
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VDTQDEWPWRVERAR
HCCCCCCCCCCCCCC
>Mature Secondary Structure
MVGAGGVYDLGYRRVWCPKFRRPVLAGPVGDRCAELVRRKCAGHKWMVVAWEVMPDHVHL
CCCCCCCCCCCCCEECCHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCEEEE
FVKAHPKHSPSSVANPLKGLTSRVLRVEFGHLCSRLPAMWSRSYFAATVGVVSAETVRRY
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VDTQDEWPWRVERAR
HCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA