| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313045
Identifier: 158313045
GI number: 158313045
Start: 1420100
End: 1422748
Strand: Direct
Name: 158313045
Synonym: Franean1_1193
Alternate gene names: NA
Gene position: 1420100-1422748 (Clockwise)
Preceding gene: 158313044
Following gene: 158313046
Centisome position: 15.81
GC content: 77.73
Gene sequence:
>2649_bases GTGCTGCCCTTCGACTCGAACGACTACCGGCGGCGCGTGCTCGCGGCCGTGCATGCCCGCGGCGGCGCCGAGCAGAGCGA CCCCTTCGAGCTCTACGACATCCCGATCGAGGAGGTCCCGCGGCTCAGCGATGAGCAGGTCCGGGCGCGGGTCGACGCCG TCTGGGCGTTCTGGCAGCGCAGCCGGGACCACCCCCGCTACCGGGGTGTGATCATCGCGTTGCTGGGCCTGCACGACGAG CTGTCCGCGGCGCTGGCCACCGCCGCCTCCCGCACCGAGCTCGCCGCCCGGGTCGGCGCCGCGCGCGAGGCCCGCGACGG TGAGCGCTTCGCCGAGCTCGACGCCGCCGTCCGCCGGCTGGTCAGCCGGTTCGGCGGCCTCCCCGAGGACAAGCTGGCCG GGCTGCGCGCCCTCGCCGCCGCGCACGGTGTTGACGACGCCGCGTTCGCGCTGCGCACCCGCAGGTACCGGGTGCTGCCC GCGGGCACGCCCGAGCGGGCGGACGCCACGTCGACGCGCCGGCCCGTCCCGGCCGAGGTGATACGTCAGGTGCGAGCCGA CCTCGACGAGCTTGGCCGGATCGCGGGCGTGACCCCGCCGCGGAGCCTGTTCGACCTGCTGGGGATCGCGCCGGGCGCCA GCCGGGAGGAGATCAGGGCCGTCCGCGACGCCGCCGCCGCCCGCAACCGCGAGCGCCGGCCGGACCGGCGGCGGGCCCTG CTGGACGACCTGCTGACCGCCGTGCGGGCCCTGCTCGTCGACGGCGACCCAGAGGCGTATCTGGACGCGTTGGTCGAACC CGTGAAGATTGTGCTGCGCCCGCGGGTCGCCACCGCCGTGCTCATCGAGGACCGCCTGCTGCCCTCGGCCGCCGCCGAGC TCGTCGTGGCGGCCGAGACGGAGGGCCTCGACCCCGGCCGGGCGCGCGCGGTCGTCGCCGACCTCGCCCGCGAGCACGGC GTGGACGCCCCGGTCGTGGCGCACACCCCGCGGTCGGGGGCCGGCTCGCCCGCCGGTGGGCCGTCCACGGGCGCGGCCTT CGACGGCGACGCGGGCGACGGTCCGGGGAGCGGTGGTCGGGGCGGCCCGTCGCCGGTCAACCCGGTGCCGGTGCGTTCTG AGACCGGGCGTCCGGAGCCGGTGCGTGCCGCCGACTGGCAGAGCGCGCTCTCCCGGGCGCGGGCCGCGCTGCGTGCCGGC CGCCCGATCGCCGCCAGCGACGAGATCACCCGCGCCCGTGAGATCGCCGGGGAGACATTGCCCCCGATCCGGGCGGTCGG CGACGAGGTGGAGCGCGCCATCCGGGCGGCCGGCGAGCGCTGGCGCGCGATCGTCGCGGAGCTCGCCGCCAACCGCCAGC ACGCGGTGGTCCGTCTCGCCGACGAGCTGGCCCGCCTCGGCGCGGACGTGCCGGGCCCCGACGGACGCGTCCTTGACGAG GTGCGCGCGGCGGCCCAGGCTCGGTGCGCCCAGGCGGATGACCTCGTCCGGCGGGCCCGGGCGCAGTCCGGCCCGGAACG GATCCGGCTCGCCCGCGAAGCCCTGGCCCTCGCCGCGGACCACGACGAGGCACAGGAGCTGGCGGGGACCTCCTCATCCG GCGACCCGCAGCCGCAGCCGCAGCCCTCGGCGTCGGCGTCGGCGTCGACCGCGACGGCGGCCTCGGACGCGGCAGCAGCG GTGGGATCCGGTGCCGATCCGCTCCCGGCTTCCAACCGGCCGGGCGGGCCGCCGGCCGGACAACCGGCCGGACAACTGGC GGGTCAGCCGTCCGGGCAGCGGGTCGAGGCCGGCCGGACCGCGGAGGCCGAGCGCGTCGTCGAGCCGCCGAGCGGCGTGG CCGCCCGGTGGGACGGCGCCTCCGTGGTGATCAGCTGGCGGCCGACGACCACCCCCGGCGAGGCCCGCTACCGGATCCGC CGGATCACCGCGGACGGCAACTCGCGCGCGGTCGGGGTCACCTCGGCCACCACCATCGAGGACGGCGGTGTCTTCCGCGG CGCGTCGATCCCCGAGTACGAGGTGATCGCCGGGATCGACGGCGCCTGGTCGCGCCCGGCCCGCTGGCCGAGCCCGACTC CCACCCTCGTTCCCACTGCCACGCCCGGGGCACACGCTGAATCCGGCGGGCACGTCGAGCCTGGGCGGCGCGTCGAGCCC GGGGCGCACGCCGAATCCGCTGCGCGCGTCGATGCCGGGCCGCCGTCCGGGCTGCCGTTGTTCGCGGTGCCGCCGCCGGG GCCGCACACCGCGGCCGACGACGTGGGGCCCGTGCCCGACCTGCGGATGGTCGACGGGCGTCTGTGCTGGACCTGGCCGG TCGGCTGCACGGAGATGATGGTCACGGCGCGGGCGGACCTGCCTCCGGCCGGCGCGCAGGAGCTCGGCTCCACCACGCGC AAGGTGACCAACACCCGCTATGACATCGATGGTGGCTTCCTGCTGCCGGCCGTCCGTCCACTGCATGTCGCGCTCTTCGC GTGCGTGCGGGTCCGCGGTGAGCTGGTCGTCGCGGGCACGGCGGCCGGACGGTGCCTGGTCGATCCCGCCGGTGGGCTGA CGGTGGTCGGCCCGGAGCCGCACGGGGGCGCCGGGGCAGCGGCCGCGGGCGTCGCCGGGAGCAACCAGGGGCCCGAGAGG ACCACATAG
Upstream 100 bases:
>100_bases CGTAGCCGCCGCCCTGCGCTGGTGGCGCCGGTCAGCCCTGAGGGGGCGGGGCCGGCGCCGGACAGAACGGCCGGAGAGCG TCACGGAAAGGGAGTCCACG
Downstream 100 bases:
>100_bases AGGTCGCGCGGCCACCGGGGGAGCGCCGGAGCCAGACCGGCCGGTGCGACCCGGTGGCTGCACCGCTCGCCGTCCGGAGG GACCCGCGGGCGGCGTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 882; Mature: 882
Protein sequence:
>882_residues MLPFDSNDYRRRVLAAVHARGGAEQSDPFELYDIPIEEVPRLSDEQVRARVDAVWAFWQRSRDHPRYRGVIIALLGLHDE LSAALATAASRTELAARVGAAREARDGERFAELDAAVRRLVSRFGGLPEDKLAGLRALAAAHGVDDAAFALRTRRYRVLP AGTPERADATSTRRPVPAEVIRQVRADLDELGRIAGVTPPRSLFDLLGIAPGASREEIRAVRDAAAARNRERRPDRRRAL LDDLLTAVRALLVDGDPEAYLDALVEPVKIVLRPRVATAVLIEDRLLPSAAAELVVAAETEGLDPGRARAVVADLAREHG VDAPVVAHTPRSGAGSPAGGPSTGAAFDGDAGDGPGSGGRGGPSPVNPVPVRSETGRPEPVRAADWQSALSRARAALRAG RPIAASDEITRAREIAGETLPPIRAVGDEVERAIRAAGERWRAIVAELAANRQHAVVRLADELARLGADVPGPDGRVLDE VRAAAQARCAQADDLVRRARAQSGPERIRLAREALALAADHDEAQELAGTSSSGDPQPQPQPSASASASTATAASDAAAA VGSGADPLPASNRPGGPPAGQPAGQLAGQPSGQRVEAGRTAEAERVVEPPSGVAARWDGASVVISWRPTTTPGEARYRIR RITADGNSRAVGVTSATTIEDGGVFRGASIPEYEVIAGIDGAWSRPARWPSPTPTLVPTATPGAHAESGGHVEPGRRVEP GAHAESAARVDAGPPSGLPLFAVPPPGPHTAADDVGPVPDLRMVDGRLCWTWPVGCTEMMVTARADLPPAGAQELGSTTR KVTNTRYDIDGGFLLPAVRPLHVALFACVRVRGELVVAGTAAGRCLVDPAGGLTVVGPEPHGGAGAAAAGVAGSNQGPER TT
Sequences:
>Translated_882_residues MLPFDSNDYRRRVLAAVHARGGAEQSDPFELYDIPIEEVPRLSDEQVRARVDAVWAFWQRSRDHPRYRGVIIALLGLHDE LSAALATAASRTELAARVGAAREARDGERFAELDAAVRRLVSRFGGLPEDKLAGLRALAAAHGVDDAAFALRTRRYRVLP AGTPERADATSTRRPVPAEVIRQVRADLDELGRIAGVTPPRSLFDLLGIAPGASREEIRAVRDAAAARNRERRPDRRRAL LDDLLTAVRALLVDGDPEAYLDALVEPVKIVLRPRVATAVLIEDRLLPSAAAELVVAAETEGLDPGRARAVVADLAREHG VDAPVVAHTPRSGAGSPAGGPSTGAAFDGDAGDGPGSGGRGGPSPVNPVPVRSETGRPEPVRAADWQSALSRARAALRAG RPIAASDEITRAREIAGETLPPIRAVGDEVERAIRAAGERWRAIVAELAANRQHAVVRLADELARLGADVPGPDGRVLDE VRAAAQARCAQADDLVRRARAQSGPERIRLAREALALAADHDEAQELAGTSSSGDPQPQPQPSASASASTATAASDAAAA VGSGADPLPASNRPGGPPAGQPAGQLAGQPSGQRVEAGRTAEAERVVEPPSGVAARWDGASVVISWRPTTTPGEARYRIR RITADGNSRAVGVTSATTIEDGGVFRGASIPEYEVIAGIDGAWSRPARWPSPTPTLVPTATPGAHAESGGHVEPGRRVEP GAHAESAARVDAGPPSGLPLFAVPPPGPHTAADDVGPVPDLRMVDGRLCWTWPVGCTEMMVTARADLPPAGAQELGSTTR KVTNTRYDIDGGFLLPAVRPLHVALFACVRVRGELVVAGTAAGRCLVDPAGGLTVVGPEPHGGAGAAAAGVAGSNQGPER TT >Mature_882_residues MLPFDSNDYRRRVLAAVHARGGAEQSDPFELYDIPIEEVPRLSDEQVRARVDAVWAFWQRSRDHPRYRGVIIALLGLHDE LSAALATAASRTELAARVGAAREARDGERFAELDAAVRRLVSRFGGLPEDKLAGLRALAAAHGVDDAAFALRTRRYRVLP AGTPERADATSTRRPVPAEVIRQVRADLDELGRIAGVTPPRSLFDLLGIAPGASREEIRAVRDAAAARNRERRPDRRRAL LDDLLTAVRALLVDGDPEAYLDALVEPVKIVLRPRVATAVLIEDRLLPSAAAELVVAAETEGLDPGRARAVVADLAREHG VDAPVVAHTPRSGAGSPAGGPSTGAAFDGDAGDGPGSGGRGGPSPVNPVPVRSETGRPEPVRAADWQSALSRARAALRAG RPIAASDEITRAREIAGETLPPIRAVGDEVERAIRAAGERWRAIVAELAANRQHAVVRLADELARLGADVPGPDGRVLDE VRAAAQARCAQADDLVRRARAQSGPERIRLAREALALAADHDEAQELAGTSSSGDPQPQPQPSASASASTATAASDAAAA VGSGADPLPASNRPGGPPAGQPAGQLAGQPSGQRVEAGRTAEAERVVEPPSGVAARWDGASVVISWRPTTTPGEARYRIR RITADGNSRAVGVTSATTIEDGGVFRGASIPEYEVIAGIDGAWSRPARWPSPTPTLVPTATPGAHAESGGHVEPGRRVEP GAHAESAARVDAGPPSGLPLFAVPPPGPHTAADDVGPVPDLRMVDGRLCWTWPVGCTEMMVTARADLPPAGAQELGSTTR KVTNTRYDIDGGFLLPAVRPLHVALFACVRVRGELVVAGTAAGRCLVDPAGGLTVVGPEPHGGAGAAAAGVAGSNQGPER TT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91773; Mature: 91773
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPFDSNDYRRRVLAAVHARGGAEQSDPFELYDIPIEEVPRLSDEQVRARVDAVWAFWQR CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHH SRDHPRYRGVIIALLGLHDELSAALATAASRTELAARVGAAREARDGERFAELDAAVRRL CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH VSRFGGLPEDKLAGLRALAAAHGVDDAAFALRTRRYRVLPAGTPERADATSTRRPVPAEV HHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHH IRQVRADLDELGRIAGVTPPRSLFDLLGIAPGASREEIRAVRDAAAARNRERRPDRRRAL HHHHHHCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LDDLLTAVRALLVDGDPEAYLDALVEPVKIVLRPRVATAVLIEDRLLPSAAAELVVAAET HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHEEEEECC EGLDPGRARAVVADLAREHGVDAPVVAHTPRSGAGSPAGGPSTGAAFDGDAGDGPGSGGR CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGPSPVNPVPVRSETGRPEPVRAADWQSALSRARAALRAGRPIAASDEITRAREIAGETL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC PPIRAVGDEVERAIRAAGERWRAIVAELAANRQHAVVRLADELARLGADVPGPDGRVLDE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH VRAAAQARCAQADDLVRRARAQSGPERIRLAREALALAADHDEAQELAGTSSSGDPQPQP HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCC QPSASASASTATAASDAAAAVGSGADPLPASNRPGGPPAGQPAGQLAGQPSGQRVEAGRT CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCC AEAERVVEPPSGVAARWDGASVVISWRPTTTPGEARYRIRRITADGNSRAVGVTSATTIE CCHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEECCEEC DGGVFRGASIPEYEVIAGIDGAWSRPARWPSPTPTLVPTATPGAHAESGGHVEPGRRVEP CCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC GAHAESAARVDAGPPSGLPLFAVPPPGPHTAADDVGPVPDLRMVDGRLCWTWPVGCTEMM CCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCEEEEECCCCHHHHH VTARADLPPAGAQELGSTTRKVTNTRYDIDGGFLLPAVRPLHVALFACVRVRGELVVAGT HHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCEECCHHHHHHHHHHHHHHHCCCEEEEEC AAGRCLVDPAGGLTVVGPEPHGGAGAAAAGVAGSNQGPERTT CCCEEEECCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MLPFDSNDYRRRVLAAVHARGGAEQSDPFELYDIPIEEVPRLSDEQVRARVDAVWAFWQR CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHH SRDHPRYRGVIIALLGLHDELSAALATAASRTELAARVGAAREARDGERFAELDAAVRRL CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH VSRFGGLPEDKLAGLRALAAAHGVDDAAFALRTRRYRVLPAGTPERADATSTRRPVPAEV HHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHH IRQVRADLDELGRIAGVTPPRSLFDLLGIAPGASREEIRAVRDAAAARNRERRPDRRRAL HHHHHHCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LDDLLTAVRALLVDGDPEAYLDALVEPVKIVLRPRVATAVLIEDRLLPSAAAELVVAAET HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHEEEEECC EGLDPGRARAVVADLAREHGVDAPVVAHTPRSGAGSPAGGPSTGAAFDGDAGDGPGSGGR CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGPSPVNPVPVRSETGRPEPVRAADWQSALSRARAALRAGRPIAASDEITRAREIAGETL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC PPIRAVGDEVERAIRAAGERWRAIVAELAANRQHAVVRLADELARLGADVPGPDGRVLDE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH VRAAAQARCAQADDLVRRARAQSGPERIRLAREALALAADHDEAQELAGTSSSGDPQPQP HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCC QPSASASASTATAASDAAAAVGSGADPLPASNRPGGPPAGQPAGQLAGQPSGQRVEAGRT CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCC AEAERVVEPPSGVAARWDGASVVISWRPTTTPGEARYRIRRITADGNSRAVGVTSATTIE CCHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEECCEEC DGGVFRGASIPEYEVIAGIDGAWSRPARWPSPTPTLVPTATPGAHAESGGHVEPGRRVEP CCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC GAHAESAARVDAGPPSGLPLFAVPPPGPHTAADDVGPVPDLRMVDGRLCWTWPVGCTEMM CCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCEEEEECCCCHHHHH VTARADLPPAGAQELGSTTRKVTNTRYDIDGGFLLPAVRPLHVALFACVRVRGELVVAGT HHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCEECCHHHHHHHHHHHHHHHCCCEEEEEC AAGRCLVDPAGGLTVVGPEPHGGAGAAAAGVAGSNQGPERTT CCCEEEECCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA