| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is tauA [C]
Identifier: 158313024
GI number: 158313024
Start: 1396382
End: 1397458
Strand: Direct
Name: tauA [C]
Synonym: Franean1_1172
Alternate gene names: 158313024
Gene position: 1396382-1397458 (Clockwise)
Preceding gene: 158313023
Following gene: 158313025
Centisome position: 15.55
GC content: 68.9
Gene sequence:
>1077_bases GTGATGAGGCCCAAGAGGCTGTGGCAGCGGTTCGTGCCACTGGTTGCTGCCGGTGCGTTGGCGCTGGCGGTGACCGCCTG CTCGGGCGACGACGGGGGAACGGAGTCCGTGTCGGCGTCCGGGGAGGTGACCGGGACCCTGCGGCTGGGGTACTTCCCGA ACCTCACGCACGCCCCGGCGCTCGTCGGCGTGGGGCAGGGCATCTTCGCCAAGGAGCTGGGTTCCGGCGTGAAGCTGGAG CCGTCGACCTTCAACTCGGGCACCACGGAGGCGGAGGCGATCCTCTCCGGCGCGCTCGATGCCGGCTTCATCGGCCCGAA CCCCGCGGTGAACACGTTCATCAAGTCCAAGGGTGAGGCCATCCGGATCGTTTCCGGCGTCACCTCCGGCGGGGCGGCCC TGGTCGTGAAGCCCGAGATCACCTCGGTCGAGCAGCTGCGTGGCAAGACGCTGGCGACCCCGAGCCTGGGCAACACCCAG GACGTCGCGCTGCGGTTCTACCTGAAGAAGAACGGCCTGGCGACCGACACCAAGGGCGGCGGTGACGTCTCGATCCGCCC GCAGGAGAACTCGGTAACGGTCGACGCCTTCAAGTCCGGCGCCATCGACGGAGCCTGGGTGCCTGAGCCGGTCGCCTCCC GACTGGTCGCAGAGGGCGGCAAGGTGCTCGTCAACGAGGCCGACGAGTGGCCTGACACCGACGGGAAGTTCGTGACCACC CTCCTGGTCGTCCGCACGGAGTACCTGGAGAAGAACCCCGAGATCGTCCGCCGGCTCATCGCCGCCAACATCACGGCGAT CGACCAGCTCAACGCCGACCCGGCCGCCGGGCAGACCGCCGCGAACGAGGCGCTGGACAAGCTCACCGGCAAGCCGCTCG CCGACGGCGTCGTCGCCTCGGCCTGGAAGACGCTGACCTTCACCCCGGACCCGATCGCCAAGTCCCTGTTCATCTCGGCG GCCCACCAGGAGGAGCTCGGGCTCATCGAGGACCCCAAGCTCGACGGCATCTTCGACCTGAAGATCCTCAACGAGCTGCT CGCCGACGCCGGTGACCCCGCGGTCTCGGACAAGTAG
Upstream 100 bases:
>100_bases AGACCCCTGGTCTGGCATCCTTGCTTTCCCGATGTGTCCAATCGACTTGATGCGCTCGATCGACTTTGTGCAAGGCGCCG TGCGTGTGGGAAAGGGAAAC
Downstream 100 bases:
>100_bases GCAACTGAACAACTGAACGACTGATCGACCGCGGCTCGGCGGGCGCCACGCGTCCACCGGGCCGCGATCCGGGTTCTGCC CCAGCCCGGCGATGCCGCGA
Product: aliphatic sulfonate ABC transporter periplasmic ligand-binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MMRPKRLWQRFVPLVAAGALALAVTACSGDDGGTESVSASGEVTGTLRLGYFPNLTHAPALVGVGQGIFAKELGSGVKLE PSTFNSGTTEAEAILSGALDAGFIGPNPAVNTFIKSKGEAIRIVSGVTSGGAALVVKPEITSVEQLRGKTLATPSLGNTQ DVALRFYLKKNGLATDTKGGGDVSIRPQENSVTVDAFKSGAIDGAWVPEPVASRLVAEGGKVLVNEADEWPDTDGKFVTT LLVVRTEYLEKNPEIVRRLIAANITAIDQLNADPAAGQTAANEALDKLTGKPLADGVVASAWKTLTFTPDPIAKSLFISA AHQEELGLIEDPKLDGIFDLKILNELLADAGDPAVSDK
Sequences:
>Translated_358_residues MMRPKRLWQRFVPLVAAGALALAVTACSGDDGGTESVSASGEVTGTLRLGYFPNLTHAPALVGVGQGIFAKELGSGVKLE PSTFNSGTTEAEAILSGALDAGFIGPNPAVNTFIKSKGEAIRIVSGVTSGGAALVVKPEITSVEQLRGKTLATPSLGNTQ DVALRFYLKKNGLATDTKGGGDVSIRPQENSVTVDAFKSGAIDGAWVPEPVASRLVAEGGKVLVNEADEWPDTDGKFVTT LLVVRTEYLEKNPEIVRRLIAANITAIDQLNADPAAGQTAANEALDKLTGKPLADGVVASAWKTLTFTPDPIAKSLFISA AHQEELGLIEDPKLDGIFDLKILNELLADAGDPAVSDK >Mature_358_residues MMRPKRLWQRFVPLVAAGALALAVTACSGDDGGTESVSASGEVTGTLRLGYFPNLTHAPALVGVGQGIFAKELGSGVKLE PSTFNSGTTEAEAILSGALDAGFIGPNPAVNTFIKSKGEAIRIVSGVTSGGAALVVKPEITSVEQLRGKTLATPSLGNTQ DVALRFYLKKNGLATDTKGGGDVSIRPQENSVTVDAFKSGAIDGAWVPEPVASRLVAEGGKVLVNEADEWPDTDGKFVTT LLVVRTEYLEKNPEIVRRLIAANITAIDQLNADPAAGQTAANEALDKLTGKPLADGVVASAWKTLTFTPDPIAKSLFISA AHQEELGLIEDPKLDGIFDLKILNELLADAGDPAVSDK
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=241, Percent_Identity=29.4605809128631, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 37227; Mature: 37227
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPKRLWQRFVPLVAAGALALAVTACSGDDGGTESVSASGEVTGTLRLGYFPNLTHAPA CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCH LVGVGQGIFAKELGSGVKLEPSTFNSGTTEAEAILSGALDAGFIGPNPAVNTFIKSKGEA HHCCCCCHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCE IRIVSGVTSGGAALVVKPEITSVEQLRGKTLATPSLGNTQDVALRFYLKKNGLATDTKGG EEEEECCCCCCEEEEECCCCCHHHHHCCCEECCCCCCCCCCEEEEEEEECCCCCCCCCCC GDVSIRPQENSVTVDAFKSGAIDGAWVPEPVASRLVAEGGKVLVNEADEWPDTDGKFVTT CEEEEECCCCCEEEEEHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHH LLVVRTEYLEKNPEIVRRLIAANITAIDQLNADPAAGQTAANEALDKLTGKPLADGVVAS HHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH AWKTLTFTPDPIAKSLFISAAHQEELGLIEDPKLDGIFDLKILNELLADAGDPAVSDK HCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMRPKRLWQRFVPLVAAGALALAVTACSGDDGGTESVSASGEVTGTLRLGYFPNLTHAPA CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCH LVGVGQGIFAKELGSGVKLEPSTFNSGTTEAEAILSGALDAGFIGPNPAVNTFIKSKGEA HHCCCCCHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCE IRIVSGVTSGGAALVVKPEITSVEQLRGKTLATPSLGNTQDVALRFYLKKNGLATDTKGG EEEEECCCCCCEEEEECCCCCHHHHHCCCEECCCCCCCCCCEEEEEEEECCCCCCCCCCC GDVSIRPQENSVTVDAFKSGAIDGAWVPEPVASRLVAEGGKVLVNEADEWPDTDGKFVTT CEEEEECCCCCEEEEEHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHH LLVVRTEYLEKNPEIVRRLIAANITAIDQLNADPAAGQTAANEALDKLTGKPLADGVVAS HHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH AWKTLTFTPDPIAKSLFISAAHQEELGLIEDPKLDGIFDLKILNELLADAGDPAVSDK HCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]