Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 158312998

GI number: 158312998

Start: 1368012

End: 1369307

Strand: Direct

Name: ftsY [H]

Synonym: Franean1_1146

Alternate gene names: 158312998

Gene position: 1368012-1369307 (Clockwise)

Preceding gene: 158312997

Following gene: 158312999

Centisome position: 15.23

GC content: 75.69

Gene sequence:

>1296_bases
GTGGAGCTGGTCATCCTCATCGTCGTGATCGCCGTGGTCCTGGTCGGCATGGTCGGCCTCGTGGCCGGCACCGCCCTGCG
CTCACGCTCCCGTCGGGGCGGGTCGCGGGACGCGGACCGGCCGGACGCGGGCGCCGCGCCGTCCGCTCAGTCGGGCGTCG
CCACGCCGACGATCCCGCCGACATCCCCGCAGACCGGCGCGGCCCCACCCGGCTGGTCGGGCCTGCCCGGCGAGACGGCG
GACTCGCTGGTCGGGCAGGGCGGGCCGGCCCCCGCCGGCGCGGCGGGCACGGCGGGCGCGGCGGGCGCGGACAGCACACC
GGTCACCGGGCCCGAGATCGTCGCCCCGCGGGCCCCGGTCGACGTGCCCGCGCCCGCGACGGGCCGGATGGTACGGCTGC
GCGCCCGGCTCGCCCGTTCGCAGAACGCGCTCGGCCGCGGCCTGCTGGCGCTGCTGTCCGGGGACAACCTGGACGAGGAG
GCGTGGGAGGACGTCGAGGCGACACTGCTCGTCGCCGACGTCGGAGTCACGGCCACGGCCGAGATGGTCGAGGCGCTGCG
CGAGCGCACCAGGGTGCTCGGGGCGCGCACGGCGGCCGACGCCCGGATGATGCTGCGCGACGAACTGCTCGCCCAGGTCG
GCACGACCACCGACCGGTCGCTGCGGACGTCCGCGCCGGACCGGCCCGCCGTGGTCCTTGTCGTCGGCGTCAACGGCACC
GGAAAGACCACAACCTGCGGCAAGATCGCTCGGCTGCTCGTCGCGGACGGCCGCTCGGTCGTGCTGGGCGCGGCGGACAC
CTTCCGCGCGGCCGCCGCCGACCAGCTGGAGACCTGGGGCGGCCGGGTCGGGGCGACGACCGTGCGCGGCGCGGAGGGGG
CGGACCCGGCGTCGGTCGCCTTCGAGGCCGTCAAGCGCGGGATCGACGACGGTGCCGACACTGTGCTCGTCGACACGGCC
GGGCGGCTGCACACGAAGGTCGGCCTGATGGACGAGCTGACGAAGATCAAGAGGGTCGTCGGCAAGCAGAGCCCGGTGGA
CGAGGTCCTCCTGGTCCTGGACTCCACCACGGGGCAGAACGCCCTCGTCCAGGCCCGGGTGTTCACCGAGGCGGTGGACA
TCACCGGCGTCGTGCTGACCAAGCTGGACGGCACCGCCAAGGGCGGGATCGTCATCGCTGTGCAGCGGGAGCTCGGTGTC
CCGGTCAAGCTGATCGGCCTCGGCGAGGGCCCGGACGACCTGGCGCCCTTCGAGCCGGAGGCGTTCGTCGACGCGCTGCT
GGGCGAGCCGGCCTGA

Upstream 100 bases:

>100_bases
CGGTAACGAGGGCGCGTGACCACTCCTCCGGGCCGCCCCGCTTGCGGTGGTCACGGGGTGGGCGAGCGATGGTTGCCCGG
CGATCTGTAAGGATCGTGTC

Downstream 100 bases:

>100_bases
CGGCCGCGCGACCGTCAGGCCGCGCCTTTACGTGGCCTCCGCGGTGCGGCCGCGGGGTGCGGAACCGCGGCCGCACCGCG
GCTCGCCTGCTCGCCGTGAG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MELVILIVVIAVVLVGMVGLVAGTALRSRSRRGGSRDADRPDAGAAPSAQSGVATPTIPPTSPQTGAAPPGWSGLPGETA
DSLVGQGGPAPAGAAGTAGAAGADSTPVTGPEIVAPRAPVDVPAPATGRMVRLRARLARSQNALGRGLLALLSGDNLDEE
AWEDVEATLLVADVGVTATAEMVEALRERTRVLGARTAADARMMLRDELLAQVGTTTDRSLRTSAPDRPAVVLVVGVNGT
GKTTTCGKIARLLVADGRSVVLGAADTFRAAAADQLETWGGRVGATTVRGAEGADPASVAFEAVKRGIDDGADTVLVDTA
GRLHTKVGLMDELTKIKRVVGKQSPVDEVLLVLDSTTGQNALVQARVFTEAVDITGVVLTKLDGTAKGGIVIAVQRELGV
PVKLIGLGEGPDDLAPFEPEAFVDALLGEPA

Sequences:

>Translated_431_residues
MELVILIVVIAVVLVGMVGLVAGTALRSRSRRGGSRDADRPDAGAAPSAQSGVATPTIPPTSPQTGAAPPGWSGLPGETA
DSLVGQGGPAPAGAAGTAGAAGADSTPVTGPEIVAPRAPVDVPAPATGRMVRLRARLARSQNALGRGLLALLSGDNLDEE
AWEDVEATLLVADVGVTATAEMVEALRERTRVLGARTAADARMMLRDELLAQVGTTTDRSLRTSAPDRPAVVLVVGVNGT
GKTTTCGKIARLLVADGRSVVLGAADTFRAAAADQLETWGGRVGATTVRGAEGADPASVAFEAVKRGIDDGADTVLVDTA
GRLHTKVGLMDELTKIKRVVGKQSPVDEVLLVLDSTTGQNALVQARVFTEAVDITGVVLTKLDGTAKGGIVIAVQRELGV
PVKLIGLGEGPDDLAPFEPEAFVDALLGEPA
>Mature_431_residues
MELVILIVVIAVVLVGMVGLVAGTALRSRSRRGGSRDADRPDAGAAPSAQSGVATPTIPPTSPQTGAAPPGWSGLPGETA
DSLVGQGGPAPAGAAGTAGAAGADSTPVTGPEIVAPRAPVDVPAPATGRMVRLRARLARSQNALGRGLLALLSGDNLDEE
AWEDVEATLLVADVGVTATAEMVEALRERTRVLGARTAADARMMLRDELLAQVGTTTDRSLRTSAPDRPAVVLVVGVNGT
GKTTTCGKIARLLVADGRSVVLGAADTFRAAAADQLETWGGRVGATTVRGAEGADPASVAFEAVKRGIDDGADTVLVDTA
GRLHTKVGLMDELTKIKRVVGKQSPVDEVLLVLDSTTGQNALVQARVFTEAVDITGVVLTKLDGTAKGGIVIAVQRELGV
PVKLIGLGEGPDDLAPFEPEAFVDALLGEPA

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=268, Percent_Identity=30.2238805970149, Blast_Score=138, Evalue=9e-33,
Organism=Homo sapiens, GI226371618, Length=231, Percent_Identity=32.034632034632, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI295424842, Length=276, Percent_Identity=33.695652173913, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI23308697, Length=276, Percent_Identity=33.695652173913, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI89061728, Length=134, Percent_Identity=34.3283582089552, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1789874, Length=303, Percent_Identity=42.9042904290429, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI1788963, Length=299, Percent_Identity=36.7892976588629, Blast_Score=157, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17539958, Length=293, Percent_Identity=30.7167235494881, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI193206261, Length=219, Percent_Identity=35.6164383561644, Blast_Score=96, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6325345, Length=270, Percent_Identity=32.5925925925926, Blast_Score=139, Evalue=6e-34,
Organism=Saccharomyces cerevisiae, GI6320498, Length=228, Percent_Identity=27.1929824561404, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI17647949, Length=282, Percent_Identity=33.6879432624113, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24641198, Length=224, Percent_Identity=33.4821428571429, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 43678; Mature: 43678

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVILIVVIAVVLVGMVGLVAGTALRSRSRRGGSRDADRPDAGAAPSAQSGVATPTIPP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TSPQTGAAPPGWSGLPGETADSLVGQGGPAPAGAAGTAGAAGADSTPVTGPEIVAPRAPV
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DVPAPATGRMVRLRARLARSQNALGRGLLALLSGDNLDEEAWEDVEATLLVADVGVTATA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHEEEEEEECCCCHHH
EMVEALRERTRVLGARTAADARMMLRDELLAQVGTTTDRSLRTSAPDRPAVVLVVGVNGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCC
GKTTTCGKIARLLVADGRSVVLGAADTFRAAAADQLETWGGRVGATTVRGAEGADPASVA
CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHH
FEAVKRGIDDGADTVLVDTAGRLHTKVGLMDELTKIKRVVGKQSPVDEVLLVLDSTTGQN
HHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCC
ALVQARVFTEAVDITGVVLTKLDGTAKGGIVIAVQRELGVPVKLIGLGEGPDDLAPFEPE
CEEHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCHH
AFVDALLGEPA
HHHHHHHCCCC
>Mature Secondary Structure
MELVILIVVIAVVLVGMVGLVAGTALRSRSRRGGSRDADRPDAGAAPSAQSGVATPTIPP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TSPQTGAAPPGWSGLPGETADSLVGQGGPAPAGAAGTAGAAGADSTPVTGPEIVAPRAPV
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DVPAPATGRMVRLRARLARSQNALGRGLLALLSGDNLDEEAWEDVEATLLVADVGVTATA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHEEEEEEECCCCHHH
EMVEALRERTRVLGARTAADARMMLRDELLAQVGTTTDRSLRTSAPDRPAVVLVVGVNGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCC
GKTTTCGKIARLLVADGRSVVLGAADTFRAAAADQLETWGGRVGATTVRGAEGADPASVA
CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHH
FEAVKRGIDDGADTVLVDTAGRLHTKVGLMDELTKIKRVVGKQSPVDEVLLVLDSTTGQN
HHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCC
ALVQARVFTEAVDITGVVLTKLDGTAKGGIVIAVQRELGVPVKLIGLGEGPDDLAPFEPE
CEEHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCHH
AFVDALLGEPA
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]