| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is coaD
Identifier: 158312986
GI number: 158312986
Start: 1355466
End: 1355954
Strand: Direct
Name: coaD
Synonym: Franean1_1134
Alternate gene names: 158312986
Gene position: 1355466-1355954 (Clockwise)
Preceding gene: 158312985
Following gene: 158312987
Centisome position: 15.09
GC content: 62.37
Gene sequence:
>489_bases ATGAGGAGGGCAGTCTGTCCCGGATCGTTCGACCCCATCACCAACGGTCACCTCGACATCATCGTCAGAGCGAGCAAGCT CTTCGACGAGGTCGTCGTCGCCGTTCTGATCAATAAATCGAAGGCCCATCTGTTCACGATCGAAGAACGGATCGACCTCA TCCGGGATGCGGTGCGCAGCCATCCCGACGCACCCACCAACGTCGTAGTGGACTCGTCGCACGGCCTGCTGGTCGACTTC TGTCGGGTGCGCGGCATCCAGTCCATTGTCAAGGGCCTGCGGGCCGTCAGTGATTTCGACTACGAGCTGCAGATGGCACA GATGAACCACTCGCTGGCCGGAGTGGAGACCCTGTTCATGAGTACGAACCCGCAGTACGCGTTCCTCTCCTCGAGCCTTG TCAAGGAAGTCGCCCGCTACGGCGGCGACGTCTCCGGGCTGGTGCCGGACGTCGTCCTCAAGGGCCTGCGGGACCGCTCC GCGCCCTAG
Upstream 100 bases:
>100_bases AGCGCGCGTACCGGAGCGGTCCCGTGACCTGGCCGGACGGCCTCATAGCACTGCGTGAGCGCAGGTACGGAGAGGGGGTC CTCTGGTACGGTAATCGATC
Downstream 100 bases:
>100_bases TCGCCCGAGTGCGGACCGATCGCCGGCGGCACCCCTGTGGGCGCCGCCGGCGGGCGTCTGCCATCAAGTGGTTGTTGTGT TTCTGTTGTGATGGCGTGTG
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MRRAVCPGSFDPITNGHLDIIVRASKLFDEVVVAVLINKSKAHLFTIEERIDLIRDAVRSHPDAPTNVVVDSSHGLLVDF CRVRGIQSIVKGLRAVSDFDYELQMAQMNHSLAGVETLFMSTNPQYAFLSSSLVKEVARYGGDVSGLVPDVVLKGLRDRS AP
Sequences:
>Translated_162_residues MRRAVCPGSFDPITNGHLDIIVRASKLFDEVVVAVLINKSKAHLFTIEERIDLIRDAVRSHPDAPTNVVVDSSHGLLVDF CRVRGIQSIVKGLRAVSDFDYELQMAQMNHSLAGVETLFMSTNPQYAFLSSSLVKEVARYGGDVSGLVPDVVLKGLRDRS AP >Mature_162_residues MRRAVCPGSFDPITNGHLDIIVRASKLFDEVVVAVLINKSKAHLFTIEERIDLIRDAVRSHPDAPTNVVVDSSHGLLVDF CRVRGIQSIVKGLRAVSDFDYELQMAQMNHSLAGVETLFMSTNPQYAFLSSSLVKEVARYGGDVSGLVPDVVLKGLRDRS AP
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=161, Percent_Identity=43.4782608695652, Blast_Score=143, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_FRASN (A8L588)
Other databases:
- EMBL: CP000820 - RefSeq: YP_001505494.1 - ProteinModelPortal: A8L588 - SMR: A8L588 - GeneID: 5669547 - GenomeReviews: CP000820_GR - KEGG: fre:Franean1_1134 - HOGENOM: HBG288308 - OMA: VRQIAAM - ProtClustDB: PRK00168 - BioCyc: FSP1855:FRANEAN1_1134-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 17778; Mature: 17778
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAVCPGSFDPITNGHLDIIVRASKLFDEVVVAVLINKSKAHLFTIEERIDLIRDAVRS CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHC HPDAPTNVVVDSSHGLLVDFCRVRGIQSIVKGLRAVSDFDYELQMAQMNHSLAGVETLFM CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHEE STNPQYAFLSSSLVKEVARYGGDVSGLVPDVVLKGLRDRSAP CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MRRAVCPGSFDPITNGHLDIIVRASKLFDEVVVAVLINKSKAHLFTIEERIDLIRDAVRS CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHC HPDAPTNVVVDSSHGLLVDFCRVRGIQSIVKGLRAVSDFDYELQMAQMNHSLAGVETLFM CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHEE STNPQYAFLSSSLVKEVARYGGDVSGLVPDVVLKGLRDRSAP CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA