| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312980
Identifier: 158312980
GI number: 158312980
Start: 1350025
End: 1350258
Strand: Direct
Name: 158312980
Synonym: Franean1_1128
Alternate gene names: NA
Gene position: 1350025-1350258 (Clockwise)
Preceding gene: 158312977
Following gene: 158312981
Centisome position: 15.03
GC content: 61.54
Gene sequence:
>234_bases GTGGTCCACGCGTATATCCTTATCCAGACCGAGGTCGGCAAGTCGGCATCGGTGGCCAAGGAGATCGAGCAGATCCCGGG GGTCACCCAGGCCGAGGATGTGACCGGTCCCTATGACGTCATTGTGCGCGCGCAGGCGGCCAGCGTCGATGACCTGGGAA AACTCGTGATGTCACGAGTCCAGTCGGTTGACGGCATCACTCGTACCCTGACGTGCCCCGTCGTCCATTTCTGA
Upstream 100 bases:
>100_bases ATTCCTCGCCGCAGACCCTCTCATCCGGCCCGTTTGCCTGTTACCTTCTGTCAGCCCGTGTCTGCTCGACGGGCTGTCGA CGTCCGACGAGGGAGCGTCT
Downstream 100 bases:
>100_bases CTCGGCACGACCCGTCCGCCGGCTTGTGCCCCAGGGCGCGGGCCGCGCGGCGGGTCCGGCTTCTCCCGCTCTGTATCGCG GGTCTGGCGGGTCTGGCGGG
Product: AsnC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator AsnC Family; Transcriptional Regulator; Asnc Family Transcriptional Regulator; Transcriptional Regulatory Protein AsnC Family Protein; Transcription Regulator AsnC-Type-Like Protein; AsnC-Type Transcriptional Regulator; AsnC Family Transcriptional Regulatory Protein
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MVHAYILIQTEVGKSASVAKEIEQIPGVTQAEDVTGPYDVIVRAQAASVDDLGKLVMSRVQSVDGITRTLTCPVVHF
Sequences:
>Translated_77_residues MVHAYILIQTEVGKSASVAKEIEQIPGVTQAEDVTGPYDVIVRAQAASVDDLGKLVMSRVQSVDGITRTLTCPVVHF >Mature_77_residues MVHAYILIQTEVGKSASVAKEIEQIPGVTQAEDVTGPYDVIVRAQAASVDDLGKLVMSRVQSVDGITRTLTCPVVHF
Specific function: Unknown
COG id: COG1522
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8254; Mature: 8254
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHAYILIQTEVGKSASVAKEIEQIPGVTQAEDVTGPYDVIVRAQAASVDDLGKLVMSRV CEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHEEEECCCCCHHHHHHHHHHHH QSVDGITRTLTCPVVHF HHCCCCCEEEECCEECC >Mature Secondary Structure MVHAYILIQTEVGKSASVAKEIEQIPGVTQAEDVTGPYDVIVRAQAASVDDLGKLVMSRV CEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHEEEECCCCCHHHHHHHHHHHH QSVDGITRTLTCPVVHF HHCCCCCEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA