| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312969
Identifier: 158312969
GI number: 158312969
Start: 1336144
End: 1337130
Strand: Direct
Name: 158312969
Synonym: Franean1_1117
Alternate gene names: NA
Gene position: 1336144-1337130 (Clockwise)
Preceding gene: 158312967
Following gene: 158312971
Centisome position: 14.88
GC content: 77.1
Gene sequence:
>987_bases GTGGAGACTCCTGGGGCACCCGGTGGCCGGCTCACGCCCGCCGGGCCGGCGTCTGCCGCGCCCGACATCGCGGGCGCGCA GCGGGTCACCTACCGGGTGAGTCAGCGGTTCCGGTACACCTACGACGGCAGCGCGACGAACCTCGACCACCGGCTTGTCG CGGTGCCCCCGCCGCGGCACGGCGGCCAGTTCCGCCGGTCCGTCGACCTGCGGGTCTCCGCCCCGGAGGCGCGCACGACC TGGCAGCGCGGGCCGGACGGCCTTCAGATCGCCAACATCCGGATCGACGTCGTGCCGCCGACGCTGGACTTCGATGTCAC CGTCGTCGTCGAGCGGATCGCCCGGGCCGGGTGGCCGACGCTGCCGGCGTCCGCGCTGAGCAGCCGGCGCCTGCTGACCG CCACCGCTCTCACCTCCCCCACCCCGGCGATGATCGACGCGGCGCGCTCGATGGCCGGGCCCGACCCGGTCGCCACGGCC CGCCGGGTGTGCGGATGGGTCCACGAGCGCATCGCCTACGTCTCGGGCAGCACCGACGTCGGGACGACCGCCGCCCAGGC GCTCGGCGGCGGGCGCGGCGTCTGCCAGGACCAGGCCCACGTGATGATCGCGATGTGCCGCGCGGCCGGCATCCCCGCCC GGTACGCGCAGGGGCACATGCTGGGTGAGGGCGCCTCGCATGCCTGGGTGGAGGTGCTGGTGCCCGCGGCCCTCGCTCCG CCCGTCGACGGGGCCTCGCCCGTCGGCGGGGCTGGCGCGCCCGCCGGGGCGGGGGCGGTCGATCCGGGGCCGGTCGAGGC GTTCGCCCCCGGCGGTGTCGGCGCGGCCGCGGTGGCCTTCGACCCCTGCCACGACCGGCTCGCCGACCTGCGGTACGTCA CGGTGGCGGTCGGTCGCGACTACCAGGACGTCGCACCGACCTCGGGTCGCTACGTCGGCGCGGGCCGCGGCGTCCTGGTC GCCACCGCGCGGGTCGACGTCGTCTAA
Upstream 100 bases:
>100_bases GCTGAGATGTCCTGTGCCGCTGCCGTTCGGTGACAGTCGTGCCGCGGTGCGGCATTTGTTAACGGACGGGAAACAGGCCA GAGTGAAGATCGGTGGCGTG
Downstream 100 bases:
>100_bases AGGGCCGAGCTACTTCCGACTCAGGACCAGCCCGCCCCGCCACCGCCACACCGACCGGCCGGCCGGCCCGCACTACCACT GTCGCCGGCCCGGTCGGCGC
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues METPGAPGGRLTPAGPASAAPDIAGAQRVTYRVSQRFRYTYDGSATNLDHRLVAVPPPRHGGQFRRSVDLRVSAPEARTT WQRGPDGLQIANIRIDVVPPTLDFDVTVVVERIARAGWPTLPASALSSRRLLTATALTSPTPAMIDAARSMAGPDPVATA RRVCGWVHERIAYVSGSTDVGTTAAQALGGGRGVCQDQAHVMIAMCRAAGIPARYAQGHMLGEGASHAWVEVLVPAALAP PVDGASPVGGAGAPAGAGAVDPGPVEAFAPGGVGAAAVAFDPCHDRLADLRYVTVAVGRDYQDVAPTSGRYVGAGRGVLV ATARVDVV
Sequences:
>Translated_328_residues METPGAPGGRLTPAGPASAAPDIAGAQRVTYRVSQRFRYTYDGSATNLDHRLVAVPPPRHGGQFRRSVDLRVSAPEARTT WQRGPDGLQIANIRIDVVPPTLDFDVTVVVERIARAGWPTLPASALSSRRLLTATALTSPTPAMIDAARSMAGPDPVATA RRVCGWVHERIAYVSGSTDVGTTAAQALGGGRGVCQDQAHVMIAMCRAAGIPARYAQGHMLGEGASHAWVEVLVPAALAP PVDGASPVGGAGAPAGAGAVDPGPVEAFAPGGVGAAAVAFDPCHDRLADLRYVTVAVGRDYQDVAPTSGRYVGAGRGVLV ATARVDVV >Mature_328_residues METPGAPGGRLTPAGPASAAPDIAGAQRVTYRVSQRFRYTYDGSATNLDHRLVAVPPPRHGGQFRRSVDLRVSAPEARTT WQRGPDGLQIANIRIDVVPPTLDFDVTVVVERIARAGWPTLPASALSSRRLLTATALTSPTPAMIDAARSMAGPDPVATA RRVCGWVHERIAYVSGSTDVGTTAAQALGGGRGVCQDQAHVMIAMCRAAGIPARYAQGHMLGEGASHAWVEVLVPAALAP PVDGASPVGGAGAPAGAGAVDPGPVEAFAPGGVGAAAVAFDPCHDRLADLRYVTVAVGRDYQDVAPTSGRYVGAGRGVLV ATARVDVV
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0607 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 33652; Mature: 33652
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPGAPGGRLTPAGPASAAPDIAGAQRVTYRVSQRFRYTYDGSATNLDHRLVAVPPPRH CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCEEEEECCCCC GGQFRRSVDLRVSAPEARTTWQRGPDGLQIANIRIDVVPPTLDFDVTVVVERIARAGWPT CCCCEEEEEEEEECCCHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCC LPASALSSRRLLTATALTSPTPAMIDAARSMAGPDPVATARRVCGWVHERIAYVSGSTDV CCHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC GTTAAQALGGGRGVCQDQAHVMIAMCRAAGIPARYAQGHMLGEGASHAWVEVLVPAALAP CHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCC PVDGASPVGGAGAPAGAGAVDPGPVEAFAPGGVGAAAVAFDPCHDRLADLRYVTVAVGRD CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCHHHHHHHCEEEEEEECCC YQDVAPTSGRYVGAGRGVLVATARVDVV HHHCCCCCCCEEECCCCEEEEEEEEECC >Mature Secondary Structure METPGAPGGRLTPAGPASAAPDIAGAQRVTYRVSQRFRYTYDGSATNLDHRLVAVPPPRH CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCEEEEECCCCC GGQFRRSVDLRVSAPEARTTWQRGPDGLQIANIRIDVVPPTLDFDVTVVVERIARAGWPT CCCCEEEEEEEEECCCHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCC LPASALSSRRLLTATALTSPTPAMIDAARSMAGPDPVATARRVCGWVHERIAYVSGSTDV CCHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC GTTAAQALGGGRGVCQDQAHVMIAMCRAAGIPARYAQGHMLGEGASHAWVEVLVPAALAP CHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCC PVDGASPVGGAGAPAGAGAVDPGPVEAFAPGGVGAAAVAFDPCHDRLADLRYVTVAVGRD CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCHHHHHHHCEEEEEEECCC YQDVAPTSGRYVGAGRGVLVATARVDVV HHHCCCCCCCEEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]