Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312969

Identifier: 158312969

GI number: 158312969

Start: 1336144

End: 1337130

Strand: Direct

Name: 158312969

Synonym: Franean1_1117

Alternate gene names: NA

Gene position: 1336144-1337130 (Clockwise)

Preceding gene: 158312967

Following gene: 158312971

Centisome position: 14.88

GC content: 77.1

Gene sequence:

>987_bases
GTGGAGACTCCTGGGGCACCCGGTGGCCGGCTCACGCCCGCCGGGCCGGCGTCTGCCGCGCCCGACATCGCGGGCGCGCA
GCGGGTCACCTACCGGGTGAGTCAGCGGTTCCGGTACACCTACGACGGCAGCGCGACGAACCTCGACCACCGGCTTGTCG
CGGTGCCCCCGCCGCGGCACGGCGGCCAGTTCCGCCGGTCCGTCGACCTGCGGGTCTCCGCCCCGGAGGCGCGCACGACC
TGGCAGCGCGGGCCGGACGGCCTTCAGATCGCCAACATCCGGATCGACGTCGTGCCGCCGACGCTGGACTTCGATGTCAC
CGTCGTCGTCGAGCGGATCGCCCGGGCCGGGTGGCCGACGCTGCCGGCGTCCGCGCTGAGCAGCCGGCGCCTGCTGACCG
CCACCGCTCTCACCTCCCCCACCCCGGCGATGATCGACGCGGCGCGCTCGATGGCCGGGCCCGACCCGGTCGCCACGGCC
CGCCGGGTGTGCGGATGGGTCCACGAGCGCATCGCCTACGTCTCGGGCAGCACCGACGTCGGGACGACCGCCGCCCAGGC
GCTCGGCGGCGGGCGCGGCGTCTGCCAGGACCAGGCCCACGTGATGATCGCGATGTGCCGCGCGGCCGGCATCCCCGCCC
GGTACGCGCAGGGGCACATGCTGGGTGAGGGCGCCTCGCATGCCTGGGTGGAGGTGCTGGTGCCCGCGGCCCTCGCTCCG
CCCGTCGACGGGGCCTCGCCCGTCGGCGGGGCTGGCGCGCCCGCCGGGGCGGGGGCGGTCGATCCGGGGCCGGTCGAGGC
GTTCGCCCCCGGCGGTGTCGGCGCGGCCGCGGTGGCCTTCGACCCCTGCCACGACCGGCTCGCCGACCTGCGGTACGTCA
CGGTGGCGGTCGGTCGCGACTACCAGGACGTCGCACCGACCTCGGGTCGCTACGTCGGCGCGGGCCGCGGCGTCCTGGTC
GCCACCGCGCGGGTCGACGTCGTCTAA

Upstream 100 bases:

>100_bases
GCTGAGATGTCCTGTGCCGCTGCCGTTCGGTGACAGTCGTGCCGCGGTGCGGCATTTGTTAACGGACGGGAAACAGGCCA
GAGTGAAGATCGGTGGCGTG

Downstream 100 bases:

>100_bases
AGGGCCGAGCTACTTCCGACTCAGGACCAGCCCGCCCCGCCACCGCCACACCGACCGGCCGGCCGGCCCGCACTACCACT
GTCGCCGGCCCGGTCGGCGC

Product: transglutaminase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
METPGAPGGRLTPAGPASAAPDIAGAQRVTYRVSQRFRYTYDGSATNLDHRLVAVPPPRHGGQFRRSVDLRVSAPEARTT
WQRGPDGLQIANIRIDVVPPTLDFDVTVVVERIARAGWPTLPASALSSRRLLTATALTSPTPAMIDAARSMAGPDPVATA
RRVCGWVHERIAYVSGSTDVGTTAAQALGGGRGVCQDQAHVMIAMCRAAGIPARYAQGHMLGEGASHAWVEVLVPAALAP
PVDGASPVGGAGAPAGAGAVDPGPVEAFAPGGVGAAAVAFDPCHDRLADLRYVTVAVGRDYQDVAPTSGRYVGAGRGVLV
ATARVDVV

Sequences:

>Translated_328_residues
METPGAPGGRLTPAGPASAAPDIAGAQRVTYRVSQRFRYTYDGSATNLDHRLVAVPPPRHGGQFRRSVDLRVSAPEARTT
WQRGPDGLQIANIRIDVVPPTLDFDVTVVVERIARAGWPTLPASALSSRRLLTATALTSPTPAMIDAARSMAGPDPVATA
RRVCGWVHERIAYVSGSTDVGTTAAQALGGGRGVCQDQAHVMIAMCRAAGIPARYAQGHMLGEGASHAWVEVLVPAALAP
PVDGASPVGGAGAPAGAGAVDPGPVEAFAPGGVGAAAVAFDPCHDRLADLRYVTVAVGRDYQDVAPTSGRYVGAGRGVLV
ATARVDVV
>Mature_328_residues
METPGAPGGRLTPAGPASAAPDIAGAQRVTYRVSQRFRYTYDGSATNLDHRLVAVPPPRHGGQFRRSVDLRVSAPEARTT
WQRGPDGLQIANIRIDVVPPTLDFDVTVVVERIARAGWPTLPASALSSRRLLTATALTSPTPAMIDAARSMAGPDPVATA
RRVCGWVHERIAYVSGSTDVGTTAAQALGGGRGVCQDQAHVMIAMCRAAGIPARYAQGHMLGEGASHAWVEVLVPAALAP
PVDGASPVGGAGAPAGAGAVDPGPVEAFAPGGVGAAAVAFDPCHDRLADLRYVTVAVGRDYQDVAPTSGRYVGAGRGVLV
ATARVDVV

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML0607 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013589
- InterPro:   IPR002931 [H]

Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 33652; Mature: 33652

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPGAPGGRLTPAGPASAAPDIAGAQRVTYRVSQRFRYTYDGSATNLDHRLVAVPPPRH
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCEEEEECCCCC
GGQFRRSVDLRVSAPEARTTWQRGPDGLQIANIRIDVVPPTLDFDVTVVVERIARAGWPT
CCCCEEEEEEEEECCCHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCC
LPASALSSRRLLTATALTSPTPAMIDAARSMAGPDPVATARRVCGWVHERIAYVSGSTDV
CCHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
GTTAAQALGGGRGVCQDQAHVMIAMCRAAGIPARYAQGHMLGEGASHAWVEVLVPAALAP
CHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCC
PVDGASPVGGAGAPAGAGAVDPGPVEAFAPGGVGAAAVAFDPCHDRLADLRYVTVAVGRD
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCHHHHHHHCEEEEEEECCC
YQDVAPTSGRYVGAGRGVLVATARVDVV
HHHCCCCCCCEEECCCCEEEEEEEEECC
>Mature Secondary Structure
METPGAPGGRLTPAGPASAAPDIAGAQRVTYRVSQRFRYTYDGSATNLDHRLVAVPPPRH
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCEEEEECCCCC
GGQFRRSVDLRVSAPEARTTWQRGPDGLQIANIRIDVVPPTLDFDVTVVVERIARAGWPT
CCCCEEEEEEEEECCCHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCC
LPASALSSRRLLTATALTSPTPAMIDAARSMAGPDPVATARRVCGWVHERIAYVSGSTDV
CCHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
GTTAAQALGGGRGVCQDQAHVMIAMCRAAGIPARYAQGHMLGEGASHAWVEVLVPAALAP
CHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCC
PVDGASPVGGAGAPAGAGAVDPGPVEAFAPGGVGAAAVAFDPCHDRLADLRYVTVAVGRD
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCHHHHHHHCEEEEEEECCC
YQDVAPTSGRYVGAGRGVLVATARVDVV
HHHCCCCCCCEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]