| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ilvB1 [H]
Identifier: 158312944
GI number: 158312944
Start: 1301369
End: 1303165
Strand: Direct
Name: ilvB1 [H]
Synonym: Franean1_1090
Alternate gene names: 158312944
Gene position: 1301369-1303165 (Clockwise)
Preceding gene: 158312943
Following gene: 158312945
Centisome position: 14.49
GC content: 71.56
Gene sequence:
>1797_bases ATGACCAGAGAGACCAGACAGATCACCGGAGCGCAGTCGCTCGTCCACTCGCTCGAGGCGGTCGGTGCCGACGTGGTCTT CGGCATTCCGGGCGGGGCGATCCTGCCCGCCTACGATCCGCTGTTCGACTCCACCCGGGTCCGGCACGTGCTCGTCCGGC ACGAGCAGGGCGCCGGGCACGCCGCCGAGGGGTATGCCCAGGCCACCGGGCGTGTCGGGGTCTGCATGGCGACGTCCGGG CCGGGCGCGACGAACCTCGTGACACCGATCGCGGACGCCTACATGGACTCGGTGCCCATCGTCGCCATCACCGGGCAGGT GCCGAGCGCGGCGATCGGCACCGACGCCTTCCAGGAAGCCGACATCTGCGGCATCACGCTGCCGATCACCAAGCACAACT TCCTGGTGCAGTCGGCGGACGACATCCCACGCACGATCGCCGAGGCGTTCCACATCGCCTCGACGGGGCGCCCGGGCCCG GTGCTGGTCGACCTGCCGAAGGACATCCTGCAGGCGGTCACGTCGGTCCTGCCGCACGAGGTGTGGCCGCCGACGCTCGA CCTGCCCGGCTACCGCCCGGTCACCCGGCCGCACGCCAAGCAGGTCCGCGAGGCGGCCAAGATGATCAGTGCGGCGCGCC GGCCGGTGCTCTACGTGGGCGGTGGGGTGCTGAAGGCCCGTGCCGCCGCCGAGCTGCGGGTGCTCGCCGAGCTCACCGGC ATCCCGGTGGTCACCACGCTGATGGCGCGCGGCGCGTTCCCCGACTCCCACCCGCAGCACCTGGGCATGCCCGGGATGCA CGGCTCCGTCGCCGCGGTCACCGCGATGCAGAAGGCCGACCTGCTGATCACCCTGGGGGCCAGGTTCGACGACCGGGTCA CCGGCAAGCTGTCGTCATTCGCGCCCGGCGCGGCCGTCATCCACGCCGACATCGACCCGGCCGAGATCGGCAAGAACCGG ATCGCCGACGTGCCGATCGTGGGCGACTGCCGGGAGGTCATCGTCGACCTGACCGCGGCACTGCGCACCGAGGAGCGCCC CGACCTCGAGGGCTGGTGGCGGTCGCTGGACAGGTGGCGCGCGACCTACCCGCTCGGCTACGACCAGCCCGCCGACGGCT CGCTCGCCCCGCAGCAGGTCATCGAGCGGATCGGCCGGATCGCCGGCCCGGAGACCGTTTTCGCGGCCGGGGTGGGGCAG CACCAGATGTGGGCCGCCCAGTTCATCTCCTACGAGCACCCCTACACCTGGCTGAACTCCGGCGGCGCCGGCACCATGGG CTACGCCGTGCCGGCCGCGATGGGCGCCAAGGTCGGCCGCCCGGAGGCCACCGTGTGGGCGATCGACGGCGACGGCTGCT TCCAGATGACCAACCAGGAGCTCGCCACCTGCGCCCTGGAGGGCATCCCGATCAAGGTCGCGGTCATCAACAACGGTTCG CTGGGCATGGTCCGGCAGTGGCAGACGCTCTTCTACGACAAGCGCTACTCGAACACCGACCTGGGCACCCACCCGGTGTC GGCGCGCACCGGGGTGACCCGGGTCCCCGACTTCGTGCGCCTCGCCGAGGCCCTGGGCTGCGTCGGCCTGCGCTGTGAGT CGCCCGCGGACGTGGACGCCACGATCGAGAAGGCGATGAGCATCGACGACGCCCCGGTCGTGGTCGACTTCGTGGTCCAC CCCGACGCGATGGTGTGGCCGATGGTGGCCGCCGGCTCGAGCAACGACGAGATCCGCGTCGCCCGCGACATCGCCCCCGA CTTCGACTACTCCGGCGACGCGGAGGTCAACCTGTGA
Upstream 100 bases:
>100_bases TGGCAACACCGCGCACGGCGACCACCCGTCGCCGTCCGTGGACCCGTCCGTGAACGACGTCCCGTCCGCACCTCGCCGGC CCCGTCAAGGAAGACGACAG
Downstream 100 bases:
>100_bases CCCGGCACACTCTCTCGGTGCTCGTCGAGAACAAGCCCGGCGTCCTGGCCCGGGTGTCCGGCCTGTTCTCCCGGCGCGGC TTCAACATCGAGTCGCTCGC
Product: acetolactate synthase 1 catalytic subunit
Products: NA
Alternate protein names: ALS; Acetohydroxy-acid synthase large subunit; AHAS [H]
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MTRETRQITGAQSLVHSLEAVGADVVFGIPGGAILPAYDPLFDSTRVRHVLVRHEQGAGHAAEGYAQATGRVGVCMATSG PGATNLVTPIADAYMDSVPIVAITGQVPSAAIGTDAFQEADICGITLPITKHNFLVQSADDIPRTIAEAFHIASTGRPGP VLVDLPKDILQAVTSVLPHEVWPPTLDLPGYRPVTRPHAKQVREAAKMISAARRPVLYVGGGVLKARAAAELRVLAELTG IPVVTTLMARGAFPDSHPQHLGMPGMHGSVAAVTAMQKADLLITLGARFDDRVTGKLSSFAPGAAVIHADIDPAEIGKNR IADVPIVGDCREVIVDLTAALRTEERPDLEGWWRSLDRWRATYPLGYDQPADGSLAPQQVIERIGRIAGPETVFAAGVGQ HQMWAAQFISYEHPYTWLNSGGAGTMGYAVPAAMGAKVGRPEATVWAIDGDGCFQMTNQELATCALEGIPIKVAVINNGS LGMVRQWQTLFYDKRYSNTDLGTHPVSARTGVTRVPDFVRLAEALGCVGLRCESPADVDATIEKAMSIDDAPVVVDFVVH PDAMVWPMVAAGSSNDEIRVARDIAPDFDYSGDAEVNL
Sequences:
>Translated_598_residues MTRETRQITGAQSLVHSLEAVGADVVFGIPGGAILPAYDPLFDSTRVRHVLVRHEQGAGHAAEGYAQATGRVGVCMATSG PGATNLVTPIADAYMDSVPIVAITGQVPSAAIGTDAFQEADICGITLPITKHNFLVQSADDIPRTIAEAFHIASTGRPGP VLVDLPKDILQAVTSVLPHEVWPPTLDLPGYRPVTRPHAKQVREAAKMISAARRPVLYVGGGVLKARAAAELRVLAELTG IPVVTTLMARGAFPDSHPQHLGMPGMHGSVAAVTAMQKADLLITLGARFDDRVTGKLSSFAPGAAVIHADIDPAEIGKNR IADVPIVGDCREVIVDLTAALRTEERPDLEGWWRSLDRWRATYPLGYDQPADGSLAPQQVIERIGRIAGPETVFAAGVGQ HQMWAAQFISYEHPYTWLNSGGAGTMGYAVPAAMGAKVGRPEATVWAIDGDGCFQMTNQELATCALEGIPIKVAVINNGS LGMVRQWQTLFYDKRYSNTDLGTHPVSARTGVTRVPDFVRLAEALGCVGLRCESPADVDATIEKAMSIDDAPVVVDFVVH PDAMVWPMVAAGSSNDEIRVARDIAPDFDYSGDAEVNL >Mature_597_residues TRETRQITGAQSLVHSLEAVGADVVFGIPGGAILPAYDPLFDSTRVRHVLVRHEQGAGHAAEGYAQATGRVGVCMATSGP GATNLVTPIADAYMDSVPIVAITGQVPSAAIGTDAFQEADICGITLPITKHNFLVQSADDIPRTIAEAFHIASTGRPGPV LVDLPKDILQAVTSVLPHEVWPPTLDLPGYRPVTRPHAKQVREAAKMISAARRPVLYVGGGVLKARAAAELRVLAELTGI PVVTTLMARGAFPDSHPQHLGMPGMHGSVAAVTAMQKADLLITLGARFDDRVTGKLSSFAPGAAVIHADIDPAEIGKNRI ADVPIVGDCREVIVDLTAALRTEERPDLEGWWRSLDRWRATYPLGYDQPADGSLAPQQVIERIGRIAGPETVFAAGVGQH QMWAAQFISYEHPYTWLNSGGAGTMGYAVPAAMGAKVGRPEATVWAIDGDGCFQMTNQELATCALEGIPIKVAVINNGSL GMVRQWQTLFYDKRYSNTDLGTHPVSARTGVTRVPDFVRLAEALGCVGLRCESPADVDATIEKAMSIDDAPVVVDFVVHP DAMVWPMVAAGSSNDEIRVARDIAPDFDYSGDAEVNL
Specific function: Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine. Also involved in condensing pyruvate and 2-ketobutyrate to form 2-
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=575, Percent_Identity=24.1739130434783, Blast_Score=163, Evalue=5e-40, Organism=Homo sapiens, GI21361361, Length=514, Percent_Identity=26.4591439688716, Blast_Score=159, Evalue=7e-39, Organism=Escherichia coli, GI87081685, Length=581, Percent_Identity=44.0619621342513, Blast_Score=502, Evalue=1e-143, Organism=Escherichia coli, GI1790104, Length=577, Percent_Identity=41.7677642980936, Blast_Score=443, Evalue=1e-125, Organism=Escherichia coli, GI1786717, Length=591, Percent_Identity=35.0253807106599, Blast_Score=329, Evalue=4e-91, Organism=Escherichia coli, GI1787096, Length=565, Percent_Identity=29.2035398230088, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1788716, Length=496, Percent_Identity=25.8064516129032, Blast_Score=152, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17531299, Length=581, Percent_Identity=25.9896729776248, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17531301, Length=581, Percent_Identity=25.8175559380379, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17542570, Length=514, Percent_Identity=25.2918287937743, Blast_Score=139, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323755, Length=589, Percent_Identity=43.6332767402377, Blast_Score=476, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6320816, Length=488, Percent_Identity=23.3606557377049, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6323163, Length=498, Percent_Identity=24.4979919678715, Blast_Score=93, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321524, Length=495, Percent_Identity=23.2323232323232, Blast_Score=81, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6323073, Length=499, Percent_Identity=23.2464929859719, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI19922626, Length=578, Percent_Identity=26.643598615917, Blast_Score=176, Evalue=3e-44,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 63565; Mature: 63434
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00187 TPP_ENZYMES ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRETRQITGAQSLVHSLEAVGADVVFGIPGGAILPAYDPLFDSTRVRHVLVRHEQGAGH CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHEEEEEECCCCCC AAEGYAQATGRVGVCMATSGPGATNLVTPIADAYMDSVPIVAITGQVPSAAIGTDAFQEA CCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHCCCHHCCC DICGITLPITKHNFLVQSADDIPRTIAEAFHIASTGRPGPVLVDLPKDILQAVTSVLPHE CCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCC VWPPTLDLPGYRPVTRPHAKQVREAAKMISAARRPVLYVGGGVLKARAAAELRVLAELTG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCC IPVVTTLMARGAFPDSHPQHLGMPGMHGSVAAVTAMQKADLLITLGARFDDRVTGKLSSF CHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCHHCCHHCC APGAAVIHADIDPAEIGKNRIADVPIVGDCREVIVDLTAALRTEERPDLEGWWRSLDRWR CCCCEEEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ATYPLGYDQPADGSLAPQQVIERIGRIAGPETVFAAGVGQHQMWAAQFISYEHPYTWLNS EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCEEEECC GGAGTMGYAVPAAMGAKVGRPEATVWAIDGDGCFQMTNQELATCALEGIPIKVAVINNGS CCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCHHHHHHHHCCCEEEEEEEECCC LGMVRQWQTLFYDKRYSNTDLGTHPVSARTGVTRVPDFVRLAEALGCVGLRCESPADVDA CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCHH TIEKAMSIDDAPVVVDFVVHPDAMVWPMVAAGSSNDEIRVARDIAPDFDYSGDAEVNL HHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TRETRQITGAQSLVHSLEAVGADVVFGIPGGAILPAYDPLFDSTRVRHVLVRHEQGAGH CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHEEEEEECCCCCC AAEGYAQATGRVGVCMATSGPGATNLVTPIADAYMDSVPIVAITGQVPSAAIGTDAFQEA CCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHCCCHHCCC DICGITLPITKHNFLVQSADDIPRTIAEAFHIASTGRPGPVLVDLPKDILQAVTSVLPHE CCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCC VWPPTLDLPGYRPVTRPHAKQVREAAKMISAARRPVLYVGGGVLKARAAAELRVLAELTG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCC IPVVTTLMARGAFPDSHPQHLGMPGMHGSVAAVTAMQKADLLITLGARFDDRVTGKLSSF CHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCHHCCHHCC APGAAVIHADIDPAEIGKNRIADVPIVGDCREVIVDLTAALRTEERPDLEGWWRSLDRWR CCCCEEEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ATYPLGYDQPADGSLAPQQVIERIGRIAGPETVFAAGVGQHQMWAAQFISYEHPYTWLNS EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCEEEECC GGAGTMGYAVPAAMGAKVGRPEATVWAIDGDGCFQMTNQELATCALEGIPIKVAVINNGS CCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCHHHHHHHHCCCEEEEEEEECCC LGMVRQWQTLFYDKRYSNTDLGTHPVSARTGVTRVPDFVRLAEALGCVGLRCESPADVDA CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCHH TIEKAMSIDDAPVVVDFVVHPDAMVWPMVAAGSSNDEIRVARDIAPDFDYSGDAEVNL HHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]