| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312919
Identifier: 158312919
GI number: 158312919
Start: 1256836
End: 1257687
Strand: Direct
Name: 158312919
Synonym: Franean1_1065
Alternate gene names: NA
Gene position: 1256836-1257687 (Clockwise)
Preceding gene: 158312918
Following gene: 158312921
Centisome position: 13.99
GC content: 75.7
Gene sequence:
>852_bases GTGACCGCCCCGCCCCGTCCCGCGCCGGTGCCGGACGGCCCGCACCTGCTGGCCTGCGACCTCGACCAGACGCTGATCTT CGCCCGGAAGTCCTTCCGGCTGGCCTCCGGGACGGCCGAGCCGGAGGTGGCCCTGGTCGAACGGATCGACGGCGTCCCCT CGGCCTACTCCACCACCCGCGCACTCGACATCCTCGCCCGCCTGCACCGGACGGCGGTCTTCGTCCCGGTCACCACGCGG ACCCTCGCCCAGTACCGGCGGATCGACCTTGGCGTGCGCCCCGCGTTCGCGATCGCGGCCAACGGCGGGCACCTGCTCGT CGACGGCGAGCCCGACCCCGTCTGGGCGGAGCAGGTCGCGGCCCGCCTCGCGGGCACCTGCGCGCCGCTGGCGGAGATGG AGGCCCTGGCCGCCCGGCTCGACGCCGCCGGATGGGCCCGCATCGTCCGGGTGGCGGACGGCCTGTTCGTCTACCTGGTC GCGCACAGCCGGGAGGCGATTCCCGACCTGTCCGACGTCGCCGCCGAGGTGGCGTCGGCGGGGTGGTCGCTGTCCACCCA GGGCCGCAAGGTCTACCTCGTTCCGACGGCCCTCACCAAGCAGGCGGCCGTCGCGGAGGTCGCCCGCCGGGCCGGCGCGT CCCGGGTGCTGGCCGCGGGCGACTCCGTCCTCGACGCGCCGATGCTCGCCGCCGCCGACCTGGCCGTCCGACCGGCGCAC GGGGAGCTGCACGAGCAGGGCTGGCAGGCCCCGAACCTCACGGTGACCACCGCCACCGGCCTCCTGGCGGCAGAGGAACT GCTGACCCTCCTCCATACCTGGTCAACTCCCCACCCCGAGCCGGCCCGGTAA
Upstream 100 bases:
>100_bases TGCCCTTCTCCTGCGTCGGCCTGGTGCGGCCGGTACGCGCCGCGGACGGCGAGAGACCGGTGTTCCACACCCCGGCGGCG CGCTGGCGCCCGGAGACACC
Downstream 100 bases:
>100_bases CCGCCCCGGCCCGGGGCCGCGCTCCTGCCGAGCCGAGCCCGAGGCGGGCCAGCAGGTGAGGTGGGTCAGTAGGGGTGGCG GTCGGGCCTGGCGTTCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTAPPRPAPVPDGPHLLACDLDQTLIFARKSFRLASGTAEPEVALVERIDGVPSAYSTTRALDILARLHRTAVFVPVTTR TLAQYRRIDLGVRPAFAIAANGGHLLVDGEPDPVWAEQVAARLAGTCAPLAEMEALAARLDAAGWARIVRVADGLFVYLV AHSREAIPDLSDVAAEVASAGWSLSTQGRKVYLVPTALTKQAAVAEVARRAGASRVLAAGDSVLDAPMLAAADLAVRPAH GELHEQGWQAPNLTVTTATGLLAAEELLTLLHTWSTPHPEPAR
Sequences:
>Translated_283_residues MTAPPRPAPVPDGPHLLACDLDQTLIFARKSFRLASGTAEPEVALVERIDGVPSAYSTTRALDILARLHRTAVFVPVTTR TLAQYRRIDLGVRPAFAIAANGGHLLVDGEPDPVWAEQVAARLAGTCAPLAEMEALAARLDAAGWARIVRVADGLFVYLV AHSREAIPDLSDVAAEVASAGWSLSTQGRKVYLVPTALTKQAAVAEVARRAGASRVLAAGDSVLDAPMLAAADLAVRPAH GELHEQGWQAPNLTVTTATGLLAAEELLTLLHTWSTPHPEPAR >Mature_282_residues TAPPRPAPVPDGPHLLACDLDQTLIFARKSFRLASGTAEPEVALVERIDGVPSAYSTTRALDILARLHRTAVFVPVTTRT LAQYRRIDLGVRPAFAIAANGGHLLVDGEPDPVWAEQVAARLAGTCAPLAEMEALAARLDAAGWARIVRVADGLFVYLVA HSREAIPDLSDVAAEVASAGWSLSTQGRKVYLVPTALTKQAAVAEVARRAGASRVLAAGDSVLDAPMLAAADLAVRPAHG ELHEQGWQAPNLTVTTATGLLAAEELLTLLHTWSTPHPEPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29860; Mature: 29729
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPPRPAPVPDGPHLLACDLDQTLIFARKSFRLASGTAEPEVALVERIDGVPSAYSTTR CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCHHHHHH ALDILARLHRTAVFVPVTTRTLAQYRRIDLGVRPAFAIAANGGHLLVDGEPDPVWAEQVA HHHHHHHHHHCEEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCHHHHHHH ARLAGTCAPLAEMEALAARLDAAGWARIVRVADGLFVYLVAHSREAIPDLSDVAAEVASA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHC GWSLSTQGRKVYLVPTALTKQAAVAEVARRAGASRVLAAGDSVLDAPMLAAADLAVRPAH CCCEECCCCEEEEEECHHHHHHHHHHHHHHCCCCEEECCCCCHHHCHHHHHHHHEEECCC GELHEQGWQAPNLTVTTATGLLAAEELLTLLHTWSTPHPEPAR CHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TAPPRPAPVPDGPHLLACDLDQTLIFARKSFRLASGTAEPEVALVERIDGVPSAYSTTR CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCHHHHHH ALDILARLHRTAVFVPVTTRTLAQYRRIDLGVRPAFAIAANGGHLLVDGEPDPVWAEQVA HHHHHHHHHHCEEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCHHHHHHH ARLAGTCAPLAEMEALAARLDAAGWARIVRVADGLFVYLVAHSREAIPDLSDVAAEVASA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHC GWSLSTQGRKVYLVPTALTKQAAVAEVARRAGASRVLAAGDSVLDAPMLAAADLAVRPAH CCCEECCCCEEEEEECHHHHHHHHHHHHHHCCCCEEECCCCCHHHCHHHHHHHHEEECCC GELHEQGWQAPNLTVTTATGLLAAEELLTLLHTWSTPHPEPAR CHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA