| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312912
Identifier: 158312912
GI number: 158312912
Start: 1241443
End: 1244232
Strand: Direct
Name: 158312912
Synonym: Franean1_1058
Alternate gene names: NA
Gene position: 1241443-1244232 (Clockwise)
Preceding gene: 158312911
Following gene: 158312913
Centisome position: 13.82
GC content: 75.52
Gene sequence:
>2790_bases ATGTTCCAGCCACGGCGTTCCTCCCGGTCGGGCCGCTCCGGCGGCCCGGGTGAGGCGGGCGAGGGCCGGGGCGGCGCCGG TGGTTACCGCTGGTTCGCCCCCGAGGACCTGCCCGGCGAGGAGCTGCCCGACACCCGGGAGCAGGGCGAGGACGATCGGG GCGAGCCCCGGTCGGACGGGCCGGAGCGGACGTCCGCCTGGTACGACACGGACGACGGCACCGACCCGGGCGACGGGGAG TACCTCCGTCCCAGGGGCTATGTGTCACGGCTGCCGGGCGGCCGGTCGGGGCGCGAGCGCTCCGACTCCGGTGGCGCGGG CGCGCCGGCCGGGGGCGGTCGTGGATTCGCCCCGGACACCTACGAGCGCGCCGGGTACGGCCCACCGGACCGCGGCGAGG GAGATCCGGAGGCGGGCTACCGCTCCGCCTACCCGGACGAGGCCTACGGCGACCCCGGGTACGCCGGCGGCAGGTACGAG GAGAGCACGTACGAGTCCGGGCCGGAGGGCGAGGACCGGTACGCGGGCGACGGCTACCGGCGGCCCGAGACCGCCGACGG CGAGTACGACCGCGGTCCCGGGTACCCGGGCGGGCCGCGGTACGCGGGCGGTGACGGGTTCGCCGACGCTCCCGGCTTCC CCGGTGAGGCGGCTTTCACGGGCGAGGCGGATTACACCCGCGGTGGCGAGCCCCCGCTCCCGCGCCGGACCAGCTACAAC GCCGCTCGCGGCTATCCCGACGACGGCGGCTACCGCGGCGAGCCCCGGTACGCCGGGGACGGCGGCGGTGCCGCGGCGTA TGCCGGCACGCCGGGATACGCCCGCGACCCGGAGTTCGTCCCGGACGGCTCCGGCGACGCCGAGTACTCCGGTGATGCGC GGTTCGCTGAAGGTGACGCGCGGTTCGCGGGGGAGGTGCGGTACTCGGACGACCCGCGGTTCTCGGGCGACTCCCAGTTC TCGGGAGATGCGGAGTACCCGAGGGACACGGCGTTCGCCGGTGACGAGGAGTACTCGGGGGACGGCCCGCGTGCCGGTGG CGAGGGCTACCCGGATGCCGCTCCGTACGTCCGCGGGTCCGACCGGTACGAACGCGAGGGCGACTTCCCGGACGGCCCGG CATACCGGCGCGACGCCGCCTACGCCGGTGGCGCCGACTACACCGATGATGCGGGCTACGCGGGTGGCGCCGCCTACGAG GCGAAGGCCGATGCCGGCCGCGGCACCGCTTTCGCGCCCGGCGGCGGAACCGGCTACGGCGGGGACACCGGCTACGGCGG GGACACCGGCTACTCCGGCGACGGTGAGTACACAGCCGCCGGCTACGACGGAGCCGACGATCGCGGCGGTGCCGAGCTGC CGCCGATGCCCGCGCAGAAGATCGATTTCTTCCGGCGCTACGTGCGCCAGTCGACCGAGCCCGCCGGCATGCCGGACGCC CCGGCCGGGGACGGCGGGGACTCGACGGGGGCCCGTCCCGCCAGCCGTCGGGACGAGTTCGACCTGCTCGACTACGAGAT CCTCGGCGGGAGCGTGTCCGACCGGCATGCCGGGGACGCCCCCGCCGGCCGCGTCCCCGGCCGGCTCGACGACGCCGGGG ACCCGATCGGGGACTACCCTGCCGCGGAGCACGCCTTCGCCGCGCGGGACCGGGTGGATGTCCTCGTGCCGGGTGACCTC CCGACACCGGGTGACCTCCCGACACCGGGTGGCCACCTGGCGGACGACGCCTTGGCGGCCGACGACGTCGTGGCGACAGG CGACGTCGTGCCGGGCAGTGTTGTGCCGGACAATGCCGCGGCGGGCGAGGTCGTGGCGTCCGGCGAGTTGCTGGAGCCCG ACGACGTCGTCGCGTCCGGTGATCTGTCGGCATCCGATGATGTTGTGGCGTTCGATGACCTCCTGACGGGAGATGATCTC CTGACAGGAGACGAGGCAGGCACCGGCAGGACGGCGGACGGGGCCGGCGCGCAGGCGCTGGGCGCACCACCGCCGGGCAC CGGCCTCGGCCTCGGTTTCGAGCAGGGGCCGTTCGACGGCACCAGCCGGCCGGCCGACGCGGACGTGATCGACGGATCGG GCGCGGACGCCGTGCCCGCGCAGACCATGCCGGCGGGCACTGTTCCGGCGGGCACTGTTCCGGCCGGCACCGTTTCGGTG GGTGCCGGGGGCGTGCCGTCCGGCGCGGTCCCGGTGGGCCTGGCGGTGGGGGACACCGATGGCCCGGCTGTGACCGGCGC GGTCCCGTCGGACGAGGCCCCGCTGGCCGCCGCCGTGGACGGCGCTTTGAACGGAGCCGCCATGAACGGAGCCGGAGCGG ACGTGTCCGCCGCGGCGCTGGTCGACCGGCAGGTGCTGGAACGCCTCGCCGATCGGGTGGACGAGCTCGTCCGCCTGCGC CGCCACGACGCCGAGCTGGTCGACCGCCTGCACGCGGAGAACGGCCGGCTGCGCGGCGGTGAGCTGACCGAGGCGATGAC CCCGCTGCTGCGCGGGCTGGTCCGGCTGTACGACCAGATGAGCAGCCTCGGTGCCGAGGACGCCCAGAGCGTCGCCGGGA TCCTGCGCAAGCAGCTGCTCCAGATCCTGGACCTGGCCGCGGACGTTCGTCCCTACGCGCCGGCGGCCGGCGACCCGTTC GATCCGGGGCGGTCGCTGGGGGTCCGCCGGGTCGGCACCGACGATCCGGCGCTGGAGGGAACTGTCGCCCGGACGGTTCG TCCCGGCTTCGTCCGCGGGGAGTCCATGGTCGTCCGACCTGCCGAGACCGAGGTCTACCGGGCCTTCTGA
Upstream 100 bases:
>100_bases GGCAGGCTGTCCGCAGTAGCCGGGAATCAGTCGTGATCAGGGCCCACGCACCGGGATGACCCGTCCGTTGCCGCCGCCTG ACGGGGAGGGGCGTTACTCC
Downstream 100 bases:
>100_bases CCAGGCGTCCCGGCGGGGCGGGACGGCCCGGGGGACGGCCGGCTCCGACGGCCCGGCACGCGCGCGTCATCATCATGAGG CAGATGCCGGCGCGCACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 929; Mature: 929
Protein sequence:
>929_residues MFQPRRSSRSGRSGGPGEAGEGRGGAGGYRWFAPEDLPGEELPDTREQGEDDRGEPRSDGPERTSAWYDTDDGTDPGDGE YLRPRGYVSRLPGGRSGRERSDSGGAGAPAGGGRGFAPDTYERAGYGPPDRGEGDPEAGYRSAYPDEAYGDPGYAGGRYE ESTYESGPEGEDRYAGDGYRRPETADGEYDRGPGYPGGPRYAGGDGFADAPGFPGEAAFTGEADYTRGGEPPLPRRTSYN AARGYPDDGGYRGEPRYAGDGGGAAAYAGTPGYARDPEFVPDGSGDAEYSGDARFAEGDARFAGEVRYSDDPRFSGDSQF SGDAEYPRDTAFAGDEEYSGDGPRAGGEGYPDAAPYVRGSDRYEREGDFPDGPAYRRDAAYAGGADYTDDAGYAGGAAYE AKADAGRGTAFAPGGGTGYGGDTGYGGDTGYSGDGEYTAAGYDGADDRGGAELPPMPAQKIDFFRRYVRQSTEPAGMPDA PAGDGGDSTGARPASRRDEFDLLDYEILGGSVSDRHAGDAPAGRVPGRLDDAGDPIGDYPAAEHAFAARDRVDVLVPGDL PTPGDLPTPGGHLADDALAADDVVATGDVVPGSVVPDNAAAGEVVASGELLEPDDVVASGDLSASDDVVAFDDLLTGDDL LTGDEAGTGRTADGAGAQALGAPPPGTGLGLGFEQGPFDGTSRPADADVIDGSGADAVPAQTMPAGTVPAGTVPAGTVSV GAGGVPSGAVPVGLAVGDTDGPAVTGAVPSDEAPLAAAVDGALNGAAMNGAGADVSAAALVDRQVLERLADRVDELVRLR RHDAELVDRLHAENGRLRGGELTEAMTPLLRGLVRLYDQMSSLGAEDAQSVAGILRKQLLQILDLAADVRPYAPAAGDPF DPGRSLGVRRVGTDDPALEGTVARTVRPGFVRGESMVVRPAETEVYRAF
Sequences:
>Translated_929_residues MFQPRRSSRSGRSGGPGEAGEGRGGAGGYRWFAPEDLPGEELPDTREQGEDDRGEPRSDGPERTSAWYDTDDGTDPGDGE YLRPRGYVSRLPGGRSGRERSDSGGAGAPAGGGRGFAPDTYERAGYGPPDRGEGDPEAGYRSAYPDEAYGDPGYAGGRYE ESTYESGPEGEDRYAGDGYRRPETADGEYDRGPGYPGGPRYAGGDGFADAPGFPGEAAFTGEADYTRGGEPPLPRRTSYN AARGYPDDGGYRGEPRYAGDGGGAAAYAGTPGYARDPEFVPDGSGDAEYSGDARFAEGDARFAGEVRYSDDPRFSGDSQF SGDAEYPRDTAFAGDEEYSGDGPRAGGEGYPDAAPYVRGSDRYEREGDFPDGPAYRRDAAYAGGADYTDDAGYAGGAAYE AKADAGRGTAFAPGGGTGYGGDTGYGGDTGYSGDGEYTAAGYDGADDRGGAELPPMPAQKIDFFRRYVRQSTEPAGMPDA PAGDGGDSTGARPASRRDEFDLLDYEILGGSVSDRHAGDAPAGRVPGRLDDAGDPIGDYPAAEHAFAARDRVDVLVPGDL PTPGDLPTPGGHLADDALAADDVVATGDVVPGSVVPDNAAAGEVVASGELLEPDDVVASGDLSASDDVVAFDDLLTGDDL LTGDEAGTGRTADGAGAQALGAPPPGTGLGLGFEQGPFDGTSRPADADVIDGSGADAVPAQTMPAGTVPAGTVPAGTVSV GAGGVPSGAVPVGLAVGDTDGPAVTGAVPSDEAPLAAAVDGALNGAAMNGAGADVSAAALVDRQVLERLADRVDELVRLR RHDAELVDRLHAENGRLRGGELTEAMTPLLRGLVRLYDQMSSLGAEDAQSVAGILRKQLLQILDLAADVRPYAPAAGDPF DPGRSLGVRRVGTDDPALEGTVARTVRPGFVRGESMVVRPAETEVYRAF >Mature_929_residues MFQPRRSSRSGRSGGPGEAGEGRGGAGGYRWFAPEDLPGEELPDTREQGEDDRGEPRSDGPERTSAWYDTDDGTDPGDGE YLRPRGYVSRLPGGRSGRERSDSGGAGAPAGGGRGFAPDTYERAGYGPPDRGEGDPEAGYRSAYPDEAYGDPGYAGGRYE ESTYESGPEGEDRYAGDGYRRPETADGEYDRGPGYPGGPRYAGGDGFADAPGFPGEAAFTGEADYTRGGEPPLPRRTSYN AARGYPDDGGYRGEPRYAGDGGGAAAYAGTPGYARDPEFVPDGSGDAEYSGDARFAEGDARFAGEVRYSDDPRFSGDSQF SGDAEYPRDTAFAGDEEYSGDGPRAGGEGYPDAAPYVRGSDRYEREGDFPDGPAYRRDAAYAGGADYTDDAGYAGGAAYE AKADAGRGTAFAPGGGTGYGGDTGYGGDTGYSGDGEYTAAGYDGADDRGGAELPPMPAQKIDFFRRYVRQSTEPAGMPDA PAGDGGDSTGARPASRRDEFDLLDYEILGGSVSDRHAGDAPAGRVPGRLDDAGDPIGDYPAAEHAFAARDRVDVLVPGDL PTPGDLPTPGGHLADDALAADDVVATGDVVPGSVVPDNAAAGEVVASGELLEPDDVVASGDLSASDDVVAFDDLLTGDDL LTGDEAGTGRTADGAGAQALGAPPPGTGLGLGFEQGPFDGTSRPADADVIDGSGADAVPAQTMPAGTVPAGTVPAGTVSV GAGGVPSGAVPVGLAVGDTDGPAVTGAVPSDEAPLAAAVDGALNGAAMNGAGADVSAAALVDRQVLERLADRVDELVRLR RHDAELVDRLHAENGRLRGGELTEAMTPLLRGLVRLYDQMSSLGAEDAQSVAGILRKQLLQILDLAADVRPYAPAAGDPF DPGRSLGVRRVGTDDPALEGTVARTVRPGFVRGESMVVRPAETEVYRAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94982; Mature: 94982
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQPRRSSRSGRSGGPGEAGEGRGGAGGYRWFAPEDLPGEELPDTREQGEDDRGEPRSDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC PERTSAWYDTDDGTDPGDGEYLRPRGYVSRLPGGRSGRERSDSGGAGAPAGGGRGFAPDT CCCCCCEECCCCCCCCCCCCEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YERAGYGPPDRGEGDPEAGYRSAYPDEAYGDPGYAGGRYEESTYESGPEGEDRYAGDGYR HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPETADGEYDRGPGYPGGPRYAGGDGFADAPGFPGEAAFTGEADYTRGGEPPLPRRTSYN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC AARGYPDDGGYRGEPRYAGDGGGAAAYAGTPGYARDPEFVPDGSGDAEYSGDARFAEGDA CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC RFAGEVRYSDDPRFSGDSQFSGDAEYPRDTAFAGDEEYSGDGPRAGGEGYPDAAPYVRGS CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRYEREGDFPDGPAYRRDAAYAGGADYTDDAGYAGGAAYEAKADAGRGTAFAPGGGTGYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEECCCCCCCCC GDTGYGGDTGYSGDGEYTAAGYDGADDRGGAELPPMPAQKIDFFRRYVRQSTEPAGMPDA CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC PAGDGGDSTGARPASRRDEFDLLDYEILGGSVSDRHAGDAPAGRVPGRLDDAGDPIGDYP CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAEHAFAARDRVDVLVPGDLPTPGDLPTPGGHLADDALAADDVVATGDVVPGSVVPDNAA CHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCEEECCCCCCCCCCCCCCC AGEVVASGELLEPDDVVASGDLSASDDVVAFDDLLTGDDLLTGDEAGTGRTADGAGAQAL CCCEEECCCCCCCCCCEECCCCCCCCCEEEHHHHHCCCCEECCCCCCCCCCCCCCCCCCC GAPPPGTGLGLGFEQGPFDGTSRPADADVIDGSGADAVPAQTMPAGTVPAGTVPAGTVSV CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEC GAGGVPSGAVPVGLAVGDTDGPAVTGAVPSDEAPLAAAVDGALNGAAMNGAGADVSAAAL CCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHCCCCCEECCCCCCHHHHHH VDRQVLERLADRVDELVRLRRHDAELVDRLHAENGRLRGGELTEAMTPLLRGLVRLYDQM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SSLGAEDAQSVAGILRKQLLQILDLAADVRPYAPAAGDPFDPGRSLGVRRVGTDDPALEG HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCEEECCCCCCCCCC TVARTVRPGFVRGESMVVRPAETEVYRAF HHHHHCCCCEECCCCEEEECCCCCHHHCC >Mature Secondary Structure MFQPRRSSRSGRSGGPGEAGEGRGGAGGYRWFAPEDLPGEELPDTREQGEDDRGEPRSDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC PERTSAWYDTDDGTDPGDGEYLRPRGYVSRLPGGRSGRERSDSGGAGAPAGGGRGFAPDT CCCCCCEECCCCCCCCCCCCEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YERAGYGPPDRGEGDPEAGYRSAYPDEAYGDPGYAGGRYEESTYESGPEGEDRYAGDGYR HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPETADGEYDRGPGYPGGPRYAGGDGFADAPGFPGEAAFTGEADYTRGGEPPLPRRTSYN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC AARGYPDDGGYRGEPRYAGDGGGAAAYAGTPGYARDPEFVPDGSGDAEYSGDARFAEGDA CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC RFAGEVRYSDDPRFSGDSQFSGDAEYPRDTAFAGDEEYSGDGPRAGGEGYPDAAPYVRGS CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRYEREGDFPDGPAYRRDAAYAGGADYTDDAGYAGGAAYEAKADAGRGTAFAPGGGTGYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEECCCCCCCCC GDTGYGGDTGYSGDGEYTAAGYDGADDRGGAELPPMPAQKIDFFRRYVRQSTEPAGMPDA CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC PAGDGGDSTGARPASRRDEFDLLDYEILGGSVSDRHAGDAPAGRVPGRLDDAGDPIGDYP CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAEHAFAARDRVDVLVPGDLPTPGDLPTPGGHLADDALAADDVVATGDVVPGSVVPDNAA CHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCEEECCCCCCCCCCCCCCC AGEVVASGELLEPDDVVASGDLSASDDVVAFDDLLTGDDLLTGDEAGTGRTADGAGAQAL CCCEEECCCCCCCCCCEECCCCCCCCCEEEHHHHHCCCCEECCCCCCCCCCCCCCCCCCC GAPPPGTGLGLGFEQGPFDGTSRPADADVIDGSGADAVPAQTMPAGTVPAGTVPAGTVSV CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEC GAGGVPSGAVPVGLAVGDTDGPAVTGAVPSDEAPLAAAVDGALNGAAMNGAGADVSAAAL CCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHCCCCCEECCCCCCHHHHHH VDRQVLERLADRVDELVRLRRHDAELVDRLHAENGRLRGGELTEAMTPLLRGLVRLYDQM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SSLGAEDAQSVAGILRKQLLQILDLAADVRPYAPAAGDPFDPGRSLGVRRVGTDDPALEG HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCEEECCCCCCCCCC TVARTVRPGFVRGESMVVRPAETEVYRAF HHHHHCCCCEECCCCEEEECCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA