| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yajO [H]
Identifier: 158312782
GI number: 158312782
Start: 1083606
End: 1084625
Strand: Direct
Name: yajO [H]
Synonym: Franean1_0928
Alternate gene names: 158312782
Gene position: 1083606-1084625 (Clockwise)
Preceding gene: 158312780
Following gene: 158312785
Centisome position: 12.06
GC content: 71.27
Gene sequence:
>1020_bases ATGCGGTACCGCACCCTCGGCCGGACCGGCATCCAGGTCAGCCCCTACGCCCTGGGCACCCTGATGTTCGCCACCTCCAT GGGCAACGCCCCCGAGGAGTCGGTCCGCATCATCCACAGGGCGCTCGACGCCGGCATCAACCTCATCGACACCGCCGACG CCTACGGCGACTCCGAGGACATCGTCGGCAGGGCGCTGGAAGGGCGCCGCGACGACGTCGTGCTCGCCACCAAGTTCGGT CGCCCGACCGCGCAGAACCCCAACCGCCAGGGCGCCTCACGGCGCCGGATCGTCGCCGCCGTGGAGAACTCGCTGCGCCG CCTGCGGACGGACCACATCGATCTCTACCAACTTCACCGCCCCGATCCCCGCACCGACGTCGAGGAGACCCTCTCCGCGC TGACCGACCTGATCCGCAGTGGCAAGGTCCGCGCGATCGGGGCGTCGGGGACCCCCGTCTCCGACATCGTCGAGGCCCAG TGGGTCGCCGGGCAGCGCGGCCTCGCGCGATTCCACACCGAGCAGCCGGTCTACTCCATCCTCAACCGCGGCATCGAGCG CGAGATCCTGCCCACCATCGAACGTTTCGGCATGGGCACCCTGGTCTGGGGCCCACTCGGCCAGGGACTGCTCACCGGCC GCGTCCGCAGGAACGAGGAGAACAACCTCCTGCGCGCCGGCCTGGTCCGGCATCTCAACGACGAGCGCCGGCTCGACGTG GTCGAGCAGCTCGTCCCCCTCGCCGCCGAGGCGGGAATGCCCATGACCCATCTCGCGATGGCGTTCGCCATCACTCACCC GGGCGTCACCAGCGCACTGGTCGGCGCCCGCACCATGGACCACCTCGACAGCCTGCTCACCGGCCTGGACGTCACCCTCA CCGACGACATCCTCGACCGCATCGACGAGATCGTCCCGCCCGGCGCCGACATCGGCACCCTCGACCAGGCCTACCGGCCC CCGGCTCTCGACGCCCCGGGCCTTCGCCGCCGCCCCCGGACCGCACGCGCAGCAGCCTGA
Upstream 100 bases:
>100_bases GCATAACCGGAAAAGCTTTCCGTATAGTTCTGGAAACCTTTTCCGCTTATCGCACAGTAGTGGCATCCAGCCGGTGCCGA CCACCCACAGGGAGAGAACC
Downstream 100 bases:
>100_bases CCTGTGGTGCCGGCGGACGGGCTACCGGCGGATGTCGGTGAGGAGCGCGAGATGGTCGGAGATCTGGGTCCGGCGTGCCG CGCTGGCGGCGACGGTGCCG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRYRTLGRTGIQVSPYALGTLMFATSMGNAPEESVRIIHRALDAGINLIDTADAYGDSEDIVGRALEGRRDDVVLATKFG RPTAQNPNRQGASRRRIVAAVENSLRRLRTDHIDLYQLHRPDPRTDVEETLSALTDLIRSGKVRAIGASGTPVSDIVEAQ WVAGQRGLARFHTEQPVYSILNRGIEREILPTIERFGMGTLVWGPLGQGLLTGRVRRNEENNLLRAGLVRHLNDERRLDV VEQLVPLAAEAGMPMTHLAMAFAITHPGVTSALVGARTMDHLDSLLTGLDVTLTDDILDRIDEIVPPGADIGTLDQAYRP PALDAPGLRRRPRTARAAA
Sequences:
>Translated_339_residues MRYRTLGRTGIQVSPYALGTLMFATSMGNAPEESVRIIHRALDAGINLIDTADAYGDSEDIVGRALEGRRDDVVLATKFG RPTAQNPNRQGASRRRIVAAVENSLRRLRTDHIDLYQLHRPDPRTDVEETLSALTDLIRSGKVRAIGASGTPVSDIVEAQ WVAGQRGLARFHTEQPVYSILNRGIEREILPTIERFGMGTLVWGPLGQGLLTGRVRRNEENNLLRAGLVRHLNDERRLDV VEQLVPLAAEAGMPMTHLAMAFAITHPGVTSALVGARTMDHLDSLLTGLDVTLTDDILDRIDEIVPPGADIGTLDQAYRP PALDAPGLRRRPRTARAAA >Mature_339_residues MRYRTLGRTGIQVSPYALGTLMFATSMGNAPEESVRIIHRALDAGINLIDTADAYGDSEDIVGRALEGRRDDVVLATKFG RPTAQNPNRQGASRRRIVAAVENSLRRLRTDHIDLYQLHRPDPRTDVEETLSALTDLIRSGKVRAIGASGTPVSDIVEAQ WVAGQRGLARFHTEQPVYSILNRGIEREILPTIERFGMGTLVWGPLGQGLLTGRVRRNEENNLLRAGLVRHLNDERRLDV VEQLVPLAAEAGMPMTHLAMAFAITHPGVTSALVGARTMDHLDSLLTGLDVTLTDDILDRIDEIVPPGADIGTLDQAYRP PALDAPGLRRRPRTARAAA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=323, Percent_Identity=30.3405572755418, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI27436969, Length=323, Percent_Identity=31.2693498452012, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI27436962, Length=323, Percent_Identity=30.3405572755418, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=31.1526479750779, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI27436966, Length=323, Percent_Identity=30.030959752322, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI27436971, Length=319, Percent_Identity=30.0940438871473, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI223718702, Length=330, Percent_Identity=28.4848484848485, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI41152114, Length=211, Percent_Identity=31.2796208530806, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI41327764, Length=187, Percent_Identity=32.0855614973262, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI87081735, Length=325, Percent_Identity=36.9230769230769, Blast_Score=191, Evalue=7e-50, Organism=Escherichia coli, GI1789375, Length=331, Percent_Identity=30.5135951661631, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1789199, Length=358, Percent_Identity=29.8882681564246, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI1788070, Length=321, Percent_Identity=33.9563862928349, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI1788081, Length=267, Percent_Identity=31.8352059925094, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI48994888, Length=158, Percent_Identity=34.1772151898734, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI212645785, Length=309, Percent_Identity=25.2427184466019, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6325169, Length=333, Percent_Identity=29.4294294294294, Blast_Score=149, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6323998, Length=336, Percent_Identity=30.3571428571429, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6319958, Length=298, Percent_Identity=29.1946308724832, Blast_Score=131, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6319951, Length=336, Percent_Identity=28.8690476190476, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6322615, Length=276, Percent_Identity=28.6231884057971, Blast_Score=116, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6323684, Length=161, Percent_Identity=36.0248447204969, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321052, Length=158, Percent_Identity=31.0126582278481, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640980, Length=360, Percent_Identity=25.5555555555556, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI45549126, Length=360, Percent_Identity=25.5555555555556, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24646155, Length=165, Percent_Identity=36.3636363636364, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24646159, Length=223, Percent_Identity=31.390134529148, Blast_Score=82, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37112; Mature: 37112
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRTLGRTGIQVSPYALGTLMFATSMGNAPEESVRIIHRALDAGINLIDTADAYGDSED CCCCCCCCCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHH IVGRALEGRRDDVVLATKFGRPTAQNPNRQGASRRRIVAAVENSLRRLRTDHIDLYQLHR HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECC PDPRTDVEETLSALTDLIRSGKVRAIGASGTPVSDIVEAQWVAGQRGLARFHTEQPVYSI CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHCCCCHHHHH LNRGIEREILPTIERFGMGTLVWGPLGQGLLTGRVRRNEENNLLRAGLVRHLNDERRLDV HHCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHH VEQLVPLAAEAGMPMTHLAMAFAITHPGVTSALVGARTMDHLDSLLTGLDVTLTDDILDR HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH IDEIVPPGADIGTLDQAYRPPALDAPGLRRRPRTARAAA HHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRYRTLGRTGIQVSPYALGTLMFATSMGNAPEESVRIIHRALDAGINLIDTADAYGDSED CCCCCCCCCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHH IVGRALEGRRDDVVLATKFGRPTAQNPNRQGASRRRIVAAVENSLRRLRTDHIDLYQLHR HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECC PDPRTDVEETLSALTDLIRSGKVRAIGASGTPVSDIVEAQWVAGQRGLARFHTEQPVYSI CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHCCCCHHHHH LNRGIEREILPTIERFGMGTLVWGPLGQGLLTGRVRRNEENNLLRAGLVRHLNDERRLDV HHCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHH VEQLVPLAAEAGMPMTHLAMAFAITHPGVTSALVGARTMDHLDSLLTGLDVTLTDDILDR HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH IDEIVPPGADIGTLDQAYRPPALDAPGLRRRPRTARAAA HHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]