| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312634
Identifier: 158312634
GI number: 158312634
Start: 904963
End: 905436
Strand: Direct
Name: 158312634
Synonym: Franean1_0778
Alternate gene names: NA
Gene position: 904963-905436 (Clockwise)
Preceding gene: 158312633
Following gene: 158312635
Centisome position: 10.08
GC content: 78.27
Gene sequence:
>474_bases GTGAGCCCCGATCATCTCGGCGGCGGCGGCGGCGCCGGCGGTCCGGGCCGGCTGCTGGTCGCCGAGCGGGTCGTGGCGAA GATCGCCGCGATCGCTGCCGCCGATGTGGAGGCTGTCGCGGGCCCGCCGCCCCGGGCGGCGACCAGGGTCGCCGCGTTCC TGCGCGACGGCTCGCCCGGTGGCCGCCCGCGACCGGGTTGGCGGGGTCCGGACTGGCGGCGGACCGGGCACGGCGCCCGG CCGGCCGACAGGTTCGGCGACCGGCCGAGCGGTCGTCCCGAGGCGACGGTGCGGGTGGTCGACGGAGCGGCCTGGGTGTC GCTGACGCTGTCGATCACCTACCCGGCCTCGGTGAGCCAGACCACGCAGGCTGTCCGGGACAGGGTGCGCGAACGGGTGG CCGCGCTCGCCGGGCTGCCCGTCGCCCGCATCGATATCGACATCCCGCTGCTGTCCGCGGGGGCGGGCCCGTGA
Upstream 100 bases:
>100_bases AGATCGACCTCAGCCGGTTCGACCGGGGCCGGTTCGACCAGTCGCGGCCGGGCCGGGACCGCGGTCGGTTCCCCGGCGGC GGCCGGCGCCGGGAACAGCC
Downstream 100 bases:
>100_bases CCCGCTCGGGCCTGCGCGCGCAGGTCCGAGCGGGTGGTGACCCGGCGTGTCAGCGTGGCCGCTCGCGGGCAGGCCGAACC GTGCCGGTTGTTCTGCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSPDHLGGGGGAGGPGRLLVAERVVAKIAAIAAADVEAVAGPPPRAATRVAAFLRDGSPGGRPRPGWRGPDWRRTGHGAR PADRFGDRPSGRPEATVRVVDGAAWVSLTLSITYPASVSQTTQAVRDRVRERVAALAGLPVARIDIDIPLLSAGAGP
Sequences:
>Translated_157_residues MSPDHLGGGGGAGGPGRLLVAERVVAKIAAIAAADVEAVAGPPPRAATRVAAFLRDGSPGGRPRPGWRGPDWRRTGHGAR PADRFGDRPSGRPEATVRVVDGAAWVSLTLSITYPASVSQTTQAVRDRVRERVAALAGLPVARIDIDIPLLSAGAGP >Mature_156_residues SPDHLGGGGGAGGPGRLLVAERVVAKIAAIAAADVEAVAGPPPRAATRVAAFLRDGSPGGRPRPGWRGPDWRRTGHGARP ADRFGDRPSGRPEATVRVVDGAAWVSLTLSITYPASVSQTTQAVRDRVRERVAALAGLPVARIDIDIPLLSAGAGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16045; Mature: 15914
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPDHLGGGGGAGGPGRLLVAERVVAKIAAIAAADVEAVAGPPPRAATRVAAFLRDGSPG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC GRPRPGWRGPDWRRTGHGARPADRFGDRPSGRPEATVRVVDGAAWVSLTLSITYPASVSQ CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCHHH TTQAVRDRVRERVAALAGLPVARIDIDIPLLSAGAGP HHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCC >Mature Secondary Structure SPDHLGGGGGAGGPGRLLVAERVVAKIAAIAAADVEAVAGPPPRAATRVAAFLRDGSPG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC GRPRPGWRGPDWRRTGHGARPADRFGDRPSGRPEATVRVVDGAAWVSLTLSITYPASVSQ CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCHHH TTQAVRDRVRERVAALAGLPVARIDIDIPLLSAGAGP HHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA