| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is tesB [H]
Identifier: 158312494
GI number: 158312494
Start: 741417
End: 742295
Strand: Direct
Name: tesB [H]
Synonym: Franean1_0637
Alternate gene names: 158312494
Gene position: 741417-742295 (Clockwise)
Preceding gene: 158312493
Following gene: 158312495
Centisome position: 8.25
GC content: 76.91
Gene sequence:
>879_bases GTGGACAGGGTCGTGCGTCGCGGTGCCGCCCGGCCACCGGCTCGGGGCACCGCACCGACCTTTCGTGGCGTCGCCGAGCT CGAGGCCGTCGACCGCGACGTCTTCCGAGGCGGCACCGGGGGCGTGCCCGTCCACCTGGGGCAGGTCGCCGTCCAGGCGC AGCTCGCGGCCGGGCGGACGGTGGGCTCGGGGCATCCCCTGCATTCGGTGCAGGCCCAGTTCCCGCGCCCTCCGCGCGAG GTGCACTCGGTCGTGTACCTCGTCGACCGGGTCCGGGACGGGGCCACGTCCGTGACCCGGCGGGTGACGGGGGTGCAGGC CGGTGAGGTGGTCTGCGCGATGCACCTGTCGTACCAGCGGGGCTGGCGTGGCGGACACCAGTTGCGCGCTCCCCGCGTGC CGCCCCCCGAGGCCCTGGAGCGCTGGCGCACCGACCCCCGGGAGCTGGGCGACCTGCTCGTCGACCTGCGGCTGGCAGCC GGTCCAGGAACCGCTGCCGGTGGTCCAGCGGGTAGGGGCGCCCGGTCTGGTGGGAACGGGCCGGGGCGCCCGATCGCCTG GGTGCGCCTCGTCGAGGGGCTACCGGACGACCAGCGCCTGCACGCCGGCGCGCTGACCTACATCGCCGGCCACGCCGCGG CCGCCCTCGCCAACTGGCCGCCGCCAGCTGCCCGCGCGCCGGTCGGTGGGGAACCGTCCCGGGCGGCGGCGCTCGACCAT GCCGCCTGGTTCCACCGCCCGTTCCGGGCCGACGAGTGGCTGCTCCTCGTCCAGGACAGCCCGTCCGGCGCGGGCCCGCG GACGTTCACCCGGGCCACCTTCTTCGACCGGGACGGCCTGCTGGTCGCCTCGACCGCCCAGGAGCTGGCTCTCGGCTGA
Upstream 100 bases:
>100_bases ACGCCCACCGGACGGCCCATCCACCCGCGATCACCGGGCTCCCGGGCCGAGGACACCGGGGCTGGTCCGCGAGGTTCGCC TGACGCCGCTGCGGATAACC
Downstream 100 bases:
>100_bases TCCCGCCCTGACCCTGGCCCCGGACCACCCGCCTCGGACCACCCGCCTCGGACCACCCGCCTCGGATCGGGGGCCCCGAA CTTGCGGGTGCGGCCAGGAT
Product: acyl-CoA thioesterase
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MDRVVRRGAARPPARGTAPTFRGVAELEAVDRDVFRGGTGGVPVHLGQVAVQAQLAAGRTVGSGHPLHSVQAQFPRPPRE VHSVVYLVDRVRDGATSVTRRVTGVQAGEVVCAMHLSYQRGWRGGHQLRAPRVPPPEALERWRTDPRELGDLLVDLRLAA GPGTAAGGPAGRGARSGGNGPGRPIAWVRLVEGLPDDQRLHAGALTYIAGHAAAALANWPPPAARAPVGGEPSRAAALDH AAWFHRPFRADEWLLLVQDSPSGAGPRTFTRATFFDRDGLLVASTAQELALG
Sequences:
>Translated_292_residues MDRVVRRGAARPPARGTAPTFRGVAELEAVDRDVFRGGTGGVPVHLGQVAVQAQLAAGRTVGSGHPLHSVQAQFPRPPRE VHSVVYLVDRVRDGATSVTRRVTGVQAGEVVCAMHLSYQRGWRGGHQLRAPRVPPPEALERWRTDPRELGDLLVDLRLAA GPGTAAGGPAGRGARSGGNGPGRPIAWVRLVEGLPDDQRLHAGALTYIAGHAAAALANWPPPAARAPVGGEPSRAAALDH AAWFHRPFRADEWLLLVQDSPSGAGPRTFTRATFFDRDGLLVASTAQELALG >Mature_292_residues MDRVVRRGAARPPARGTAPTFRGVAELEAVDRDVFRGGTGGVPVHLGQVAVQAQLAAGRTVGSGHPLHSVQAQFPRPPRE VHSVVYLVDRVRDGATSVTRRVTGVQAGEVVCAMHLSYQRGWRGGHQLRAPRVPPPEALERWRTDPRELGDLLVDLRLAA GPGTAAGGPAGRGARSGGNGPGRPIAWVRLVEGLPDDQRLHAGALTYIAGHAAAALANWPPPAARAPVGGEPSRAAALDH AAWFHRPFRADEWLLLVQDSPSGAGPRTFTRATFFDRDGLLVASTAQELALG
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=295, Percent_Identity=29.8305084745763, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI1786657, Length=277, Percent_Identity=33.5740072202166, Blast_Score=116, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17558508, Length=304, Percent_Identity=29.6052631578947, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71988741, Length=297, Percent_Identity=28.956228956229, Blast_Score=105, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 30855; Mature: 30855
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRVVRRGAARPPARGTAPTFRGVAELEAVDRDVFRGGTGGVPVHLGQVAVQAQLAAGRT CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCC VGSGHPLHSVQAQFPRPPREVHSVVYLVDRVRDGATSVTRRVTGVQAGEVVCAMHLSYQR CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEHHHHHH GWRGGHQLRAPRVPPPEALERWRTDPRELGDLLVDLRLAAGPGTAAGGPAGRGARSGGNG CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC PGRPIAWVRLVEGLPDDQRLHAGALTYIAGHAAAALANWPPPAARAPVGGEPSRAAALDH CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH AAWFHRPFRADEWLLLVQDSPSGAGPRTFTRATFFDRDGLLVASTAQELALG HHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCHHHHHCC >Mature Secondary Structure MDRVVRRGAARPPARGTAPTFRGVAELEAVDRDVFRGGTGGVPVHLGQVAVQAQLAAGRT CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCC VGSGHPLHSVQAQFPRPPREVHSVVYLVDRVRDGATSVTRRVTGVQAGEVVCAMHLSYQR CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEHHHHHH GWRGGHQLRAPRVPPPEALERWRTDPRELGDLLVDLRLAAGPGTAAGGPAGRGARSGGNG CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC PGRPIAWVRLVEGLPDDQRLHAGALTYIAGHAAAALANWPPPAARAPVGGEPSRAAALDH CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH AAWFHRPFRADEWLLLVQDSPSGAGPRTFTRATFFDRDGLLVASTAQELALG HHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]