| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312449
Identifier: 158312449
GI number: 158312449
Start: 685253
End: 686605
Strand: Direct
Name: 158312449
Synonym: Franean1_0592
Alternate gene names: NA
Gene position: 685253-686605 (Clockwise)
Preceding gene: 158312448
Following gene: 158312451
Centisome position: 7.63
GC content: 68.07
Gene sequence:
>1353_bases GTGCTGGCTACTTTGAGAAGGCGGGTGTCAGTGCAGGTCGATGTCCAGAGTCAGGGCTGCTCGCCGGGGCCTGTTCCCGA CCGGTTCCTCACGTCGAGCGAACAGATCCTGGCCGCCTCCGATCGGCCAGATGCGCCGCTGACCTGCGGTTTTCTCGTGC AGTTCGAAGGCGAGCTGGATGCGGCGCGGCTCCGGTGTGCCGTGCGTGAGGCGAGTCGCCGGCATCCCATGATGCGGGCG GCCCTCTACGGCGCGCGCCAGTATGCGTGGCGGTTCGGCACCGAACCGCCGGCAGGCTCCGTCGGGCTGGTCGAAGACGG AAGTAGCGGCTGGGACGTCCACGAGATGATGGTGTCGGGCCGTTTCGACCTGCATGCCCATCCACCGCTGCGGATCGCGT TGGTCCGTGGACCGGACGGCGACCAGCTTTCCCTCGTCGCGCACCACCTCGCGGTCGACGGCATGGGTCTTACCACGATT TTGTCCGACATCATCGCCGAGTACCGGCTGGCGGAAGTGGCCACGGTCACCGCGGGGCCTGTCGACACCCATGTCGGGCT GCCCGCCGGGGTGCCGCCGGCCGCGAAGGCGGCCGTGGCCGGCTGGACCGCCTTCACCCGACGCTCCGGCCGACACATCA CGCCCATGGGGACCGGGCGGGACACCGGTTACGGCTATCAGCCGTTGACCCTGCCGGTGCCCGGCCGAGTGCTGCTCGGC TCCGGGCGGCGAATCACCGTGAATGATCTTCTGATGGCCGCGACCCACCTCACCATCGACCGGTGGAATCGTCAACGCGG CGGGGAATCCGGAAAGCTGCGCATCAGGATGCCGATCAGTCTGGGAAACGCGGCCGAGGTGGGTGGCAACAACACCGGTC AGGCGTTGGTGGTCACCGAACCGACGGACCGGGCGGATCTGGCGAGGCTGGCCGCCCGCGTCGTGGACCAGACGGAACGC GCGAAGCAGGCGGCGACCGCCCCTCCCATCGCGGGTGTGGCGGGCAAGGTCGGTATGGTCGCGACCGAGTTGACTCCCGG CCCATGGCGAGTCCCGTTGCTGCGGTGGGGGGTGCGGGCGGCGCGCCCGCTCATCACGCCCGCTGCCGCCGTCAGTAACA TCGGCTCGCTTTCCAGCCTGGCCTCCGACGAGCCGAAGATATCCTCGGTCTATTTCACCGCTACCGTCGGCATGCCCCAG GGGCTGCTTATCTGCGTGGCCGGTTACGGTAACAACATCCACGTTACTTTCGGGTATCACCGGCACCTCTTCGGGCGCGA AGCCGCCTCGGCATTCGCGAATCTTTTCCGGACGGCCTTCGGTGAGCTGACCCGCATCGGGTCGGCCATGTAA
Upstream 100 bases:
>100_bases GCCGACGGTGATCGGTCGTCGGCAGGCGCCGGGAGGAAAGCCACGTCACAAGTCCACTGTCGGATGATCGGAGAACCTGA ACCCCCAACGCATATAACGT
Downstream 100 bases:
>100_bases GACGAGAGCTGCATCGACCACGCGGCGGAATCTGCACCCCGCGGTGTGCGTGCGGGGCAGCTCTGGATCGGGGGGACGGA GGGCAGGTTCTGGCGTTGCG
Product: condensation domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MLATLRRRVSVQVDVQSQGCSPGPVPDRFLTSSEQILAASDRPDAPLTCGFLVQFEGELDAARLRCAVREASRRHPMMRA ALYGARQYAWRFGTEPPAGSVGLVEDGSSGWDVHEMMVSGRFDLHAHPPLRIALVRGPDGDQLSLVAHHLAVDGMGLTTI LSDIIAEYRLAEVATVTAGPVDTHVGLPAGVPPAAKAAVAGWTAFTRRSGRHITPMGTGRDTGYGYQPLTLPVPGRVLLG SGRRITVNDLLMAATHLTIDRWNRQRGGESGKLRIRMPISLGNAAEVGGNNTGQALVVTEPTDRADLARLAARVVDQTER AKQAATAPPIAGVAGKVGMVATELTPGPWRVPLLRWGVRAARPLITPAAAVSNIGSLSSLASDEPKISSVYFTATVGMPQ GLLICVAGYGNNIHVTFGYHRHLFGREAASAFANLFRTAFGELTRIGSAM
Sequences:
>Translated_450_residues MLATLRRRVSVQVDVQSQGCSPGPVPDRFLTSSEQILAASDRPDAPLTCGFLVQFEGELDAARLRCAVREASRRHPMMRA ALYGARQYAWRFGTEPPAGSVGLVEDGSSGWDVHEMMVSGRFDLHAHPPLRIALVRGPDGDQLSLVAHHLAVDGMGLTTI LSDIIAEYRLAEVATVTAGPVDTHVGLPAGVPPAAKAAVAGWTAFTRRSGRHITPMGTGRDTGYGYQPLTLPVPGRVLLG SGRRITVNDLLMAATHLTIDRWNRQRGGESGKLRIRMPISLGNAAEVGGNNTGQALVVTEPTDRADLARLAARVVDQTER AKQAATAPPIAGVAGKVGMVATELTPGPWRVPLLRWGVRAARPLITPAAAVSNIGSLSSLASDEPKISSVYFTATVGMPQ GLLICVAGYGNNIHVTFGYHRHLFGREAASAFANLFRTAFGELTRIGSAM >Mature_450_residues MLATLRRRVSVQVDVQSQGCSPGPVPDRFLTSSEQILAASDRPDAPLTCGFLVQFEGELDAARLRCAVREASRRHPMMRA ALYGARQYAWRFGTEPPAGSVGLVEDGSSGWDVHEMMVSGRFDLHAHPPLRIALVRGPDGDQLSLVAHHLAVDGMGLTTI LSDIIAEYRLAEVATVTAGPVDTHVGLPAGVPPAAKAAVAGWTAFTRRSGRHITPMGTGRDTGYGYQPLTLPVPGRVLLG SGRRITVNDLLMAATHLTIDRWNRQRGGESGKLRIRMPISLGNAAEVGGNNTGQALVVTEPTDRADLARLAARVVDQTER AKQAATAPPIAGVAGKVGMVATELTPGPWRVPLLRWGVRAARPLITPAAAVSNIGSLSSLASDEPKISSVYFTATVGMPQ GLLICVAGYGNNIHVTFGYHRHLFGREAASAFANLFRTAFGELTRIGSAM
Specific function: Unknown
COG id: COG4908
COG function: function code R; Uncharacterized protein containing a NRPS condensation (elongation) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47803; Mature: 47803
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATLRRRVSVQVDVQSQGCSPGPVPDRFLTSSEQILAASDRPDAPLTCGFLVQFEGELD CCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCCCEEEEEEEEECCCCC AARLRCAVREASRRHPMMRAALYGARQYAWRFGTEPPAGSVGLVEDGSSGWDVHEMMVSG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCHHHHHHHCC RFDLHAHPPLRIALVRGPDGDQLSLVAHHLAVDGMGLTTILSDIIAEYRLAEVATVTAGP CCEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCC VDTHVGLPAGVPPAAKAAVAGWTAFTRRSGRHITPMGTGRDTGYGYQPLTLPVPGRVLLG CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEECCCCEEEEC SGRRITVNDLLMAATHLTIDRWNRQRGGESGKLRIRMPISLGNAAEVGGNNTGQALVVTE CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHCCCCCCCCEEEEEC PTDRADLARLAARVVDQTERAKQAATAPPIAGVAGKVGMVATELTPGPWRVPLLRWGVRA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH ARPLITPAAAVSNIGSLSSLASDEPKISSVYFTATVGMPQGLLICVAGYGNNIHVTFGYH CCCCCCHHHHHHCCCHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEEEECHH RHLFGREAASAFANLFRTAFGELTRIGSAM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLATLRRRVSVQVDVQSQGCSPGPVPDRFLTSSEQILAASDRPDAPLTCGFLVQFEGELD CCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCCCEEEEEEEEECCCCC AARLRCAVREASRRHPMMRAALYGARQYAWRFGTEPPAGSVGLVEDGSSGWDVHEMMVSG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCHHHHHHHCC RFDLHAHPPLRIALVRGPDGDQLSLVAHHLAVDGMGLTTILSDIIAEYRLAEVATVTAGP CCEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCC VDTHVGLPAGVPPAAKAAVAGWTAFTRRSGRHITPMGTGRDTGYGYQPLTLPVPGRVLLG CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEECCCCEEEEC SGRRITVNDLLMAATHLTIDRWNRQRGGESGKLRIRMPISLGNAAEVGGNNTGQALVVTE CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHCCCCCCCCEEEEEC PTDRADLARLAARVVDQTERAKQAATAPPIAGVAGKVGMVATELTPGPWRVPLLRWGVRA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH ARPLITPAAAVSNIGSLSSLASDEPKISSVYFTATVGMPQGLLICVAGYGNNIHVTFGYH CCCCCCHHHHHHCCCHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEEEECHH RHLFGREAASAFANLFRTAFGELTRIGSAM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA