| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312414
Identifier: 158312414
GI number: 158312414
Start: 642145
End: 642372
Strand: Direct
Name: 158312414
Synonym: Franean1_0557
Alternate gene names: NA
Gene position: 642145-642372 (Clockwise)
Preceding gene: 158312413
Following gene: 158312415
Centisome position: 7.15
GC content: 64.91
Gene sequence:
>228_bases ATGTGCTGCGTAGATCTGATCTGTGTTGCTGCACGGGCCGGTCATGGACGGAAGGAGCAGGTCGGACGGCTGCCGGCGCT GGTACCTGTCAGCTACATGACACGCATGGCGCGTTGGCGGGCTGTGTCAGCCCGCCAAGACGGGCGGGGGATCGTGGGAC GGGGGCCGTCGATGACGTCTGTTTCGCCCGAGTTCCGCAGTTCGTGGGCACACAGCGAAGATCGCTGA
Upstream 100 bases:
>100_bases CGTCCGCGCATCTGGGGGTGCCATAAATGGGGGATAGCAATCCACAGCCAGTGTCTGGAAGTAGAACGTGTCCTCGGGGG TGCCAGTGGACGGGTAGTGC
Downstream 100 bases:
>100_bases GGTGAACCCGCAGGTGCTGATGAACCTGGGCCGGGTCGACCGGGTCGACATGGACGGGCTGCTGCGGCTGGCCGCCTCGA TCCGGGCACACTTCGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MCCVDLICVAARAGHGRKEQVGRLPALVPVSYMTRMARWRAVSARQDGRGIVGRGPSMTSVSPEFRSSWAHSEDR
Sequences:
>Translated_75_residues MCCVDLICVAARAGHGRKEQVGRLPALVPVSYMTRMARWRAVSARQDGRGIVGRGPSMTSVSPEFRSSWAHSEDR >Mature_75_residues MCCVDLICVAARAGHGRKEQVGRLPALVPVSYMTRMARWRAVSARQDGRGIVGRGPSMTSVSPEFRSSWAHSEDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8259; Mature: 8259
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCVDLICVAARAGHGRKEQVGRLPALVPVSYMTRMARWRAVSARQDGRGIVGRGPSMTS CHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC VSPEFRSSWAHSEDR CCHHHHHHCCCCCCC >Mature Secondary Structure MCCVDLICVAARAGHGRKEQVGRLPALVPVSYMTRMARWRAVSARQDGRGIVGRGPSMTS CHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC VSPEFRSSWAHSEDR CCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA