| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312385
Identifier: 158312385
GI number: 158312385
Start: 614022
End: 614954
Strand: Direct
Name: 158312385
Synonym: Franean1_0527
Alternate gene names: NA
Gene position: 614022-614954 (Clockwise)
Preceding gene: 158312382
Following gene: 158312386
Centisome position: 6.84
GC content: 76.74
Gene sequence:
>933_bases TTGAACCGTTCCGGCGCGCCGTGGCCATGCCACTGTGGACCCCATGACCCGGTGGTGGCGGTGGCGCCGTTGCTGCGGAC GCCGGCGCTGCTCGGCTGTGTGGCGCTGGGCGCCGCCGGCGCCGGCGGGCTGGTCGCGGCCGTGGCGGCCGGAACGACGG GGCCCGGGAACGCGCCGGGAACGGCGGCGGTCGAGGCGGCCATGTTCTACGCGTACACAGTGGTGCTGGTGGCGCTCACC TACCGGGTCTCGACGTGGATGCTCGGCGTGGTGTGGGAGATCGACCGCTCGCGGGCGGCCCACGCCAGCCTGGCCGTGGC GGAGGAGCGGCTGCGGTTCGCCCGGGACCTGCACGACGTCCTCGGCTACAACCTCTCACTGATGGCGGTCCAGAGCGAAC TCGCCGCGCGCCTGGCCGACCTCGGCGCGGAGCTCGCGGGCGCCCAGTCGCTGTTGCGCTCGGCCGGCGTGGCCTGCCAG GTCACCGGCGCGGCCAGCCGGGACGGCCGTGAGCAGGCCCTGCCTCCCTCCGCGCAGGCCGCGCTGGGGTGGGTCGTCCG GGAGGCGACCACCAACGTGATCCATCACAGCGAGGCCACCACCTGCGCCATCGACCTCGAGGTACGCGACGGCCCCGGTC ACGCGCGCACCGCGGTGCTGCGGATCACCAACGACGGCGTTCCGCCAGTCCCGGCAGGCGCCACCAGGCCAGGCGGCTCA CCCCCCGCTCCCGGGGCGGGCAGCGGCCTGGCCGGCATCGAGGAGCGGCTCGCCGGCCTGGGCGGCGTTCTCACCGCGGC CCGGGAACCGGGTGGCTCCTTCGTCCTGGAGGCGCGGCTCCCGGTCCCCGCCGACGCCGCGCACGGCGCGGCCCCGGTCG GGACACCGCCGCCCGCGCGGGGCGCGGCCATCGTGCTGGAGGCGGGCTCATGA
Upstream 100 bases:
>100_bases AGCACCGCGATCAGCGTCAACGCCACCGGCCGAGACAGGTCCAACGTGTCTCGGACCTCCTTCGAGGCCAGGATCCGCTC CGGGATGCGGGAAGATCGCG
Downstream 100 bases:
>100_bases TCAAGGTGCTGCTCGCCGATGACGAGAACCTCATCCGCGGCGCGCTGGCGGTGCTGCTGTCCATGGAGGACGACATCACG GTGGTCGCGCAGGCGGCATC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Histidine Kinase; Two-Component Sensor Kinase; Signal Transduction Histidine Kinase; Signal Transduction Histidine Kinase-Like Protein; Sensor Kinase; Histidine Kinase Dimerization And Phosphoacceptor Region; Two Component System Histidine Kinase; Two-Component Sensory Kinase; Two-Component System Histidine Kinase; Two-Component Sensor Histidine Kinase; Two Component Sensor Kinase; Two Component Sensor Histidine Kinase; Two-Component Histidine Kinase; Two-Component System Sensor Protein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MNRSGAPWPCHCGPHDPVVAVAPLLRTPALLGCVALGAAGAGGLVAAVAAGTTGPGNAPGTAAVEAAMFYAYTVVLVALT YRVSTWMLGVVWEIDRSRAAHASLAVAEERLRFARDLHDVLGYNLSLMAVQSELAARLADLGAELAGAQSLLRSAGVACQ VTGAASRDGREQALPPSAQAALGWVVREATTNVIHHSEATTCAIDLEVRDGPGHARTAVLRITNDGVPPVPAGATRPGGS PPAPGAGSGLAGIEERLAGLGGVLTAAREPGGSFVLEARLPVPADAAHGAAPVGTPPPARGAAIVLEAGS
Sequences:
>Translated_310_residues MNRSGAPWPCHCGPHDPVVAVAPLLRTPALLGCVALGAAGAGGLVAAVAAGTTGPGNAPGTAAVEAAMFYAYTVVLVALT YRVSTWMLGVVWEIDRSRAAHASLAVAEERLRFARDLHDVLGYNLSLMAVQSELAARLADLGAELAGAQSLLRSAGVACQ VTGAASRDGREQALPPSAQAALGWVVREATTNVIHHSEATTCAIDLEVRDGPGHARTAVLRITNDGVPPVPAGATRPGGS PPAPGAGSGLAGIEERLAGLGGVLTAAREPGGSFVLEARLPVPADAAHGAAPVGTPPPARGAAIVLEAGS >Mature_310_residues MNRSGAPWPCHCGPHDPVVAVAPLLRTPALLGCVALGAAGAGGLVAAVAAGTTGPGNAPGTAAVEAAMFYAYTVVLVALT YRVSTWMLGVVWEIDRSRAAHASLAVAEERLRFARDLHDVLGYNLSLMAVQSELAARLADLGAELAGAQSLLRSAGVACQ VTGAASRDGREQALPPSAQAALGWVVREATTNVIHHSEATTCAIDLEVRDGPGHARTAVLRITNDGVPPVPAGATRPGGS PPAPGAGSGLAGIEERLAGLGGVLTAAREPGGSFVLEARLPVPADAAHGAAPVGTPPPARGAAIVLEAGS
Specific function: Unknown
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30947; Mature: 30947
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSGAPWPCHCGPHDPVVAVAPLLRTPALLGCVALGAAGAGGLVAAVAAGTTGPGNAPG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC TAAVEAAMFYAYTVVLVALTYRVSTWMLGVVWEIDRSRAAHASLAVAEERLRFARDLHDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LGYNLSLMAVQSELAARLADLGAELAGAQSLLRSAGVACQVTGAASRDGREQALPPSAQA HCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCHHH ALGWVVREATTNVIHHSEATTCAIDLEVRDGPGHARTAVLRITNDGVPPVPAGATRPGGS HHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCC PPAPGAGSGLAGIEERLAGLGGVLTAAREPGGSFVLEARLPVPADAAHGAAPVGTPPPAR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC GAAIVLEAGS CCEEEEECCC >Mature Secondary Structure MNRSGAPWPCHCGPHDPVVAVAPLLRTPALLGCVALGAAGAGGLVAAVAAGTTGPGNAPG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC TAAVEAAMFYAYTVVLVALTYRVSTWMLGVVWEIDRSRAAHASLAVAEERLRFARDLHDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LGYNLSLMAVQSELAARLADLGAELAGAQSLLRSAGVACQVTGAASRDGREQALPPSAQA HCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCHHH ALGWVVREATTNVIHHSEATTCAIDLEVRDGPGHARTAVLRITNDGVPPVPAGATRPGGS HHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCC PPAPGAGSGLAGIEERLAGLGGVLTAAREPGGSFVLEARLPVPADAAHGAAPVGTPPPAR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC GAAIVLEAGS CCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA