| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312353
Identifier: 158312353
GI number: 158312353
Start: 574870
End: 576030
Strand: Direct
Name: 158312353
Synonym: Franean1_0494
Alternate gene names: NA
Gene position: 574870-576030 (Clockwise)
Preceding gene: 158312352
Following gene: 158312359
Centisome position: 6.4
GC content: 65.2
Gene sequence:
>1161_bases ATGGAACGGCGAACGTTCTTGCGTTCCGCTATCGCGGGAACCGGCGTGGTCGCCTTCTCCGGGGCGATATGGGACACGGC CCTGGCCGCTCCCGCCCAGAACGGCTCCAGCCCCTATGGATCGCTGTTGGCGGCTGACGCCAACGGGGTCATGCTCCCCT CCGGTTTCACTAGCCGCATTGTCGCCCGTTCTGGTCAGGTGGTTTCCGGAACCAGCTACACCTGGCACAACGCCCCGGAC GGCGGCGCGGTTTTCCTGAACGGCACGGGTTGGATGTACGTCTCCAATTCGGAGGTCGGCAGCAGCGCGGGCGGGGCTTC GGTGCTGCGCTTCGACTCCAGCGGAACCGTCACCTCCGCCCAGCGCATTCTTTCAAACACGAGCAGCAACTGTGCGGGTG GGGCGACTCCGTGGGGCACGTGGCTGTCCTGCGAGGAGACCTCCAACGGGCGGGTGTGGGAGACCTATCCGGCCACCGGC GCGTCGGCTGTCAGCCGGCCGGCCATGGGCCGTTTCAAGCACGAGGCGGCTGCGTGCGACCCGGTCCGCCAGGTCATCTA CCTGACCGAGGACCAGACTGACGGCTGCTTCTACCGGTTCCGTCCGACCACCTGGGGAAACCTCTCCTCCGGCACGCTCG AGGTGTTGGTTGCGGGATCTGGAACATCCGGTACGGCAACCTGGCAGGTCGTCCCGGACCCGGACGGTTCACCGACCGCC ACCCGCAGCCAGGTTTCCGGAGCGAAGCACTTCAATGGCGGCGAGGGCTGCCACTACGCGAACAACACCGTCTGGTTCAC CACCAAGGGCGACAACCGGGTGTGGGAGGTTCACGTCGACACCAACACATTCGAACTTGCATATGACGACTCGCTGGTAT CTCCTGGACCTGCCCCGCTGACCGGTGTCGACAACATCACCGGATCGACGTACGGGGACCTTTACGTTGCTGAGGATGGC GGGAACCTGGAGATCTGCATCATCACTCCGGACGACATCGTGGCCCCGATCCTGCGGCTGGTCGGGCACAACTCATCCGA AATAACCGGACCAGCATTCTCCCCGAACGGCCAGCGGCTGTACTTCTCGTCCCAGCGCGGCACGTCCGGCTCGTCCTCCG GCGGCATCACCTTCGAGGTCACCGGTCCGTTCCGGACCTGA
Upstream 100 bases:
>100_bases TGCGCGGACAATTCCGTCTCAAGAACCTCCGGCTGCGCGATGAAAGATTGTAATCTTGCACCTTTGGTTCAGCGCTTCTG TCGTACTTTGGAGGTCGGCA
Downstream 100 bases:
>100_bases CCGGGCCGGGTTGCCTCGGCGGGTAGCTCTCACCTTGGGAGGCGGCAGCGGCACCGCTCCCCACCGCCGACCACGCGTCA ATTCTCCAGGCTGGCCAATC
Product: WD40 domain-containing protein
Products: NA
Alternate protein names: WD40 Domain-Containing Protein Beta Propeller; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; Phosphatase; Tat Pathway Signal Sequence Domain Protein; WD40 Domain-Containing Protein; LB Protein; WD40 Domain Protein Beta Propeller; DTDP-Glucose 4 6-Dehydratase; Signal Peptide
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MERRTFLRSAIAGTGVVAFSGAIWDTALAAPAQNGSSPYGSLLAADANGVMLPSGFTSRIVARSGQVVSGTSYTWHNAPD GGAVFLNGTGWMYVSNSEVGSSAGGASVLRFDSSGTVTSAQRILSNTSSNCAGGATPWGTWLSCEETSNGRVWETYPATG ASAVSRPAMGRFKHEAAACDPVRQVIYLTEDQTDGCFYRFRPTTWGNLSSGTLEVLVAGSGTSGTATWQVVPDPDGSPTA TRSQVSGAKHFNGGEGCHYANNTVWFTTKGDNRVWEVHVDTNTFELAYDDSLVSPGPAPLTGVDNITGSTYGDLYVAEDG GNLEICIITPDDIVAPILRLVGHNSSEITGPAFSPNGQRLYFSSQRGTSGSSSGGITFEVTGPFRT
Sequences:
>Translated_386_residues MERRTFLRSAIAGTGVVAFSGAIWDTALAAPAQNGSSPYGSLLAADANGVMLPSGFTSRIVARSGQVVSGTSYTWHNAPD GGAVFLNGTGWMYVSNSEVGSSAGGASVLRFDSSGTVTSAQRILSNTSSNCAGGATPWGTWLSCEETSNGRVWETYPATG ASAVSRPAMGRFKHEAAACDPVRQVIYLTEDQTDGCFYRFRPTTWGNLSSGTLEVLVAGSGTSGTATWQVVPDPDGSPTA TRSQVSGAKHFNGGEGCHYANNTVWFTTKGDNRVWEVHVDTNTFELAYDDSLVSPGPAPLTGVDNITGSTYGDLYVAEDG GNLEICIITPDDIVAPILRLVGHNSSEITGPAFSPNGQRLYFSSQRGTSGSSSGGITFEVTGPFRT >Mature_386_residues MERRTFLRSAIAGTGVVAFSGAIWDTALAAPAQNGSSPYGSLLAADANGVMLPSGFTSRIVARSGQVVSGTSYTWHNAPD GGAVFLNGTGWMYVSNSEVGSSAGGASVLRFDSSGTVTSAQRILSNTSSNCAGGATPWGTWLSCEETSNGRVWETYPATG ASAVSRPAMGRFKHEAAACDPVRQVIYLTEDQTDGCFYRFRPTTWGNLSSGTLEVLVAGSGTSGTATWQVVPDPDGSPTA TRSQVSGAKHFNGGEGCHYANNTVWFTTKGDNRVWEVHVDTNTFELAYDDSLVSPGPAPLTGVDNITGSTYGDLYVAEDG GNLEICIITPDDIVAPILRLVGHNSSEITGPAFSPNGQRLYFSSQRGTSGSSSGGITFEVTGPFRT
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40309; Mature: 40309
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRTFLRSAIAGTGVVAFSGAIWDTALAAPAQNGSSPYGSLLAADANGVMLPSGFTSRI CCHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCCCHHHH VARSGQVVSGTSYTWHNAPDGGAVFLNGTGWMYVSNSEVGSSAGGASVLRFDSSGTVTSA HHCCCCEEECCEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCHHHH QRILSNTSSNCAGGATPWGTWLSCEETSNGRVWETYPATGASAVSRPAMGRFKHEAAACD HHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHCCCCHHHHHHHHHCCC PVRQVIYLTEDQTDGCFYRFRPTTWGNLSSGTLEVLVAGSGTSGTATWQVVPDPDGSPTA CCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCC TRSQVSGAKHFNGGEGCHYANNTVWFTTKGDNRVWEVHVDTNTFELAYDDSLVSPGPAPL CHHHCCCCCCCCCCCCCEECCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCC TGVDNITGSTYGDLYVAEDGGNLEICIITPDDIVAPILRLVGHNSSEITGPAFSPNGQRL CCCCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE YFSSQRGTSGSSSGGITFEVTGPFRT EEECCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MERRTFLRSAIAGTGVVAFSGAIWDTALAAPAQNGSSPYGSLLAADANGVMLPSGFTSRI CCHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCCCHHHH VARSGQVVSGTSYTWHNAPDGGAVFLNGTGWMYVSNSEVGSSAGGASVLRFDSSGTVTSA HHCCCCEEECCEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCHHHH QRILSNTSSNCAGGATPWGTWLSCEETSNGRVWETYPATGASAVSRPAMGRFKHEAAACD HHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHCCCCHHHHHHHHHCCC PVRQVIYLTEDQTDGCFYRFRPTTWGNLSSGTLEVLVAGSGTSGTATWQVVPDPDGSPTA CCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCC TRSQVSGAKHFNGGEGCHYANNTVWFTTKGDNRVWEVHVDTNTFELAYDDSLVSPGPAPL CHHHCCCCCCCCCCCCCEECCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCC TGVDNITGSTYGDLYVAEDGGNLEICIITPDDIVAPILRLVGHNSSEITGPAFSPNGQRL CCCCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE YFSSQRGTSGSSSGGITFEVTGPFRT EEECCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA