| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312315
Identifier: 158312315
GI number: 158312315
Start: 534469
End: 536640
Strand: Direct
Name: 158312315
Synonym: Franean1_0453
Alternate gene names: NA
Gene position: 534469-536640 (Clockwise)
Preceding gene: 158312314
Following gene: 158312316
Centisome position: 5.95
GC content: 67.5
Gene sequence:
>2172_bases ATGCCCATGCCGAACCTGAGGATGACAGGTACAGGAAGGGGCCGACGCGCAGCTCCGGCACGTACAGCGGGCCAAGCGGA CCCGCCGCTGCCGTTACCGCGTCGGCGCAGGCGGGCGGCGCCTACGGCGCTGGCGTTCGCCGCGGTGCTCGCGGTCGGCG TCACGTCGCTGGTCGGCGTGTCGGCGGCCGGCGCGGCTGACGCGCCGGACTGCCAGCCCCGGACGTCCGGTGGGCCGCTG TTCGTGACCGCGACGTGTGTGGACCCCGCGCTCAACCAGCCGTACACCGACATCGATGAGCAGCGGACCACCACTGACCC CAAGACGAACGTCACGGTGACCTATCGTTACATTCACGGAGGCTTCACGGGTACGAACGCGAAGTTCTCCCTTTACTTTC CGGCGGCGGCGCAGTACCAGGGTCGGTTCTTCGAGTCCACCTACCCCACGGTGACGCAAGAGGACGCCACACCGGACGTC ATCGCCTTCGCCATCTCGAACGGCGCGTACGTCGTGTCCACCAATAACGGTGGCGGTGTCGCGGCGGCCGGTGGCCTCGG GGGGTACCGCATCAATGCGGCGTCGGCGAAGTACTCCCGGGTCGTCGCGGCGCGTGTGTACCATGGGATGGCCCGTCCAC GCGGATACATCTACGGTGCCAGCGGCGGGGCCTACCAGACCCTCGGCGCGATGGAGAACACCGACGGCGTGTGGGACGGC GGGGTGCCGATGGTGCCCGGCGTCCCCAACGGGATCCCGAGCTTCCAGGCCTCACAATCTCTCGCGCTGCGGGTACTTGC CGACAAGCTCCCACAGATCGCCGACGCGGTAGCGCCCGGCGGCAGCGGCGACCCATATAAGGGACTGAACCCGACGCAGC GACAGGTCCTCCAGGAGGTGACCCGCCTTGGATTCCCGCTGCGCGGGTGGTGGCAGTACGCGACGCTGAACGGCGGGTCG TTTTCCGTCGTGGCCCGCACCGTCCGCGCGGTGGACCCCTCGTACGTCAACGACTTCTGGGCAGCCCCTGGCTATGAGGG CAGCAGCGACGCGGCGGTCAAGGCAGCCCGCGTCCAGTACGACACGACGGTCACGGGCCTGGTCGGAAGCCCAACCAGTG CGTTGACGCTGTCCGGCGTGCCCGGCGGCGACGTCAGCGGGGCCGACCTTGTCGTCACGAGCGGCGCGGCTGCCGGCAAG TCGGTACCGATCGGTACCGTGACCGGTACCACCGTCGGTTTCGGGTTCGGCGCCGATCCGGCGGTGACGGGCGCCATCAA GCCCGGTGACGAGGTGCGTATCGACAACTCGTGGCTCCTCGCTCTGCAGTACTACCAGCGTCACCAGGTCCCCTCCTCGG ACCAGTACGGCTGGAACCAGTACCGCGGCCCGAATGGTGACCCGCTCTACCCACAGCGTCCGATCCTGGTGGGGCCACTC CTTGCGGCGGGTGCCGGCGGCGCGGCCCCAACCGGGCACTTCAACGGCAAGATGATCATGCTCGCATCCACCATGGACAC CCAGGCCTATCCCTGGTCGGCCGACTGGTACCACAAGCAGGCGTCAACCGCGCTGGGCGGGAAGCTGGCCGACAGTTATC GGCTGTGGTACATGGACAACGCCGAACACGGCCCGGACCTCGCCGACTACACCAGCGCGATCCCCGGCGCGGCTGCCCAC ATCGTTGGCTATACAAGTGCGCTGAACCAGGCCCTCCTCGACCTCGACGCCTGGGTTGTCCGCGGAACGCGGCCACCGGC CAGCACCACTTACACCGTCGACGGGAACACTCAGATAAACCTGCCGGCTGCCGCCGCCCAGCGCAATGGCGTTCAGCCTG TGGTCACCCTGTCGGCGAACAACGCCAACAGCGGACACCCCATCGACGTCCGCGTAGGACAGCAAGTCACGTTTTCGGTG CAGGCCCAGGTACCACCGGGCGCCGGAAAGATCGTGCGTACGGAATGGGACTTTCTGGGTGCTGGCGACTACCCGATCAC CGCGACCAACCAACCCATTGAGGCAGCCGAGAAGCTCCGGGCCACCTACAGCTACTCGAAGCCCGGAACATACTTCCCCG TAGTTCGGGTCACCTCCCAACGAGACGGCAACTCTCACACTCCCTACGGCCTGATCCAAAACCTCGCCGCCGTGCGCATC GTGGTCCACTAA
Upstream 100 bases:
>100_bases TGGATTCACCTGATCCACAACGACCTGGCCGCTCCAACCTCATTGAGTTGTTCGGGCGGCCATGACCGCAGGTCCCGCGA CCAGAAAGGTAGGTACAGGG
Downstream 100 bases:
>100_bases CAGCGATCCGCTCATCGAGGCAGCATCACCAGACGAGCTAGCCGGCGGCCCACCGCTGTGGCTTTGCCGCAGCGGTGGGC CGCCATCTGTGGTGGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MPMPNLRMTGTGRGRRAAPARTAGQADPPLPLPRRRRRAAPTALAFAAVLAVGVTSLVGVSAAGAADAPDCQPRTSGGPL FVTATCVDPALNQPYTDIDEQRTTTDPKTNVTVTYRYIHGGFTGTNAKFSLYFPAAAQYQGRFFESTYPTVTQEDATPDV IAFAISNGAYVVSTNNGGGVAAAGGLGGYRINAASAKYSRVVAARVYHGMARPRGYIYGASGGAYQTLGAMENTDGVWDG GVPMVPGVPNGIPSFQASQSLALRVLADKLPQIADAVAPGGSGDPYKGLNPTQRQVLQEVTRLGFPLRGWWQYATLNGGS FSVVARTVRAVDPSYVNDFWAAPGYEGSSDAAVKAARVQYDTTVTGLVGSPTSALTLSGVPGGDVSGADLVVTSGAAAGK SVPIGTVTGTTVGFGFGADPAVTGAIKPGDEVRIDNSWLLALQYYQRHQVPSSDQYGWNQYRGPNGDPLYPQRPILVGPL LAAGAGGAAPTGHFNGKMIMLASTMDTQAYPWSADWYHKQASTALGGKLADSYRLWYMDNAEHGPDLADYTSAIPGAAAH IVGYTSALNQALLDLDAWVVRGTRPPASTTYTVDGNTQINLPAAAAQRNGVQPVVTLSANNANSGHPIDVRVGQQVTFSV QAQVPPGAGKIVRTEWDFLGAGDYPITATNQPIEAAEKLRATYSYSKPGTYFPVVRVTSQRDGNSHTPYGLIQNLAAVRI VVH
Sequences:
>Translated_723_residues MPMPNLRMTGTGRGRRAAPARTAGQADPPLPLPRRRRRAAPTALAFAAVLAVGVTSLVGVSAAGAADAPDCQPRTSGGPL FVTATCVDPALNQPYTDIDEQRTTTDPKTNVTVTYRYIHGGFTGTNAKFSLYFPAAAQYQGRFFESTYPTVTQEDATPDV IAFAISNGAYVVSTNNGGGVAAAGGLGGYRINAASAKYSRVVAARVYHGMARPRGYIYGASGGAYQTLGAMENTDGVWDG GVPMVPGVPNGIPSFQASQSLALRVLADKLPQIADAVAPGGSGDPYKGLNPTQRQVLQEVTRLGFPLRGWWQYATLNGGS FSVVARTVRAVDPSYVNDFWAAPGYEGSSDAAVKAARVQYDTTVTGLVGSPTSALTLSGVPGGDVSGADLVVTSGAAAGK SVPIGTVTGTTVGFGFGADPAVTGAIKPGDEVRIDNSWLLALQYYQRHQVPSSDQYGWNQYRGPNGDPLYPQRPILVGPL LAAGAGGAAPTGHFNGKMIMLASTMDTQAYPWSADWYHKQASTALGGKLADSYRLWYMDNAEHGPDLADYTSAIPGAAAH IVGYTSALNQALLDLDAWVVRGTRPPASTTYTVDGNTQINLPAAAAQRNGVQPVVTLSANNANSGHPIDVRVGQQVTFSV QAQVPPGAGKIVRTEWDFLGAGDYPITATNQPIEAAEKLRATYSYSKPGTYFPVVRVTSQRDGNSHTPYGLIQNLAAVRI VVH >Mature_722_residues PMPNLRMTGTGRGRRAAPARTAGQADPPLPLPRRRRRAAPTALAFAAVLAVGVTSLVGVSAAGAADAPDCQPRTSGGPLF VTATCVDPALNQPYTDIDEQRTTTDPKTNVTVTYRYIHGGFTGTNAKFSLYFPAAAQYQGRFFESTYPTVTQEDATPDVI AFAISNGAYVVSTNNGGGVAAAGGLGGYRINAASAKYSRVVAARVYHGMARPRGYIYGASGGAYQTLGAMENTDGVWDGG VPMVPGVPNGIPSFQASQSLALRVLADKLPQIADAVAPGGSGDPYKGLNPTQRQVLQEVTRLGFPLRGWWQYATLNGGSF SVVARTVRAVDPSYVNDFWAAPGYEGSSDAAVKAARVQYDTTVTGLVGSPTSALTLSGVPGGDVSGADLVVTSGAAAGKS VPIGTVTGTTVGFGFGADPAVTGAIKPGDEVRIDNSWLLALQYYQRHQVPSSDQYGWNQYRGPNGDPLYPQRPILVGPLL AAGAGGAAPTGHFNGKMIMLASTMDTQAYPWSADWYHKQASTALGGKLADSYRLWYMDNAEHGPDLADYTSAIPGAAAHI VGYTSALNQALLDLDAWVVRGTRPPASTTYTVDGNTQINLPAAAAQRNGVQPVVTLSANNANSGHPIDVRVGQQVTFSVQ AQVPPGAGKIVRTEWDFLGAGDYPITATNQPIEAAEKLRATYSYSKPGTYFPVVRVTSQRDGNSHTPYGLIQNLAAVRIV VH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75704; Mature: 75573
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMPNLRMTGTGRGRRAAPARTAGQADPPLPLPRRRRRAAPTALAFAAVLAVGVTSLVGV CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHC SAAGAADAPDCQPRTSGGPLFVTATCVDPALNQPYTDIDEQRTTTDPKTNVTVTYRYIHG CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC GFTGTNAKFSLYFPAAAQYQGRFFESTYPTVTQEDATPDVIAFAISNGAYVVSTNNGGGV CCCCCCCEEEEEECCHHCCCCCEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCE AAAGGLGGYRINAASAKYSRVVAARVYHGMARPRGYIYGASGGAYQTLGAMENTDGVWDG EEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCC GVPMVPGVPNGIPSFQASQSLALRVLADKLPQIADAVAPGGSGDPYKGLNPTQRQVLQEV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH TRLGFPLRGWWQYATLNGGSFSVVARTVRAVDPSYVNDFWAAPGYEGSSDAAVKAARVQY HHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHEEEEEEEE DTTVTGLVGSPTSALTLSGVPGGDVSGADLVVTSGAAAGKSVPIGTVTGTTVGFGFGADP CCEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCEEECCCCCCC AVTGAIKPGDEVRIDNSWLLALQYYQRHQVPSSDQYGWNQYRGPNGDPLYPQRPILVGPL CEECCCCCCCEEEECCCEEEEEEHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCEEECHH LAAGAGGAAPTGHFNGKMIMLASTMDTQAYPWSADWYHKQASTALGGKLADSYRLWYMDN HHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC AEHGPDLADYTSAIPGAAAHIVGYTSALNQALLDLDAWVVRGTRPPASTTYTVDGNTQIN CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEEECCCEEEE LPAAAAQRNGVQPVVTLSANNANSGHPIDVRVGQQVTFSVQAQVPPGAGKIVRTEWDFLG CCHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEEEEECCCCCCCEEEEECCEEC AGDYPITATNQPIEAAEKLRATYSYSKPGTYFPVVRVTSQRDGNSHTPYGLIQNLAAVRI CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCEEEEE VVH EEC >Mature Secondary Structure PMPNLRMTGTGRGRRAAPARTAGQADPPLPLPRRRRRAAPTALAFAAVLAVGVTSLVGV CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHC SAAGAADAPDCQPRTSGGPLFVTATCVDPALNQPYTDIDEQRTTTDPKTNVTVTYRYIHG CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC GFTGTNAKFSLYFPAAAQYQGRFFESTYPTVTQEDATPDVIAFAISNGAYVVSTNNGGGV CCCCCCCEEEEEECCHHCCCCCEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCE AAAGGLGGYRINAASAKYSRVVAARVYHGMARPRGYIYGASGGAYQTLGAMENTDGVWDG EEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCC GVPMVPGVPNGIPSFQASQSLALRVLADKLPQIADAVAPGGSGDPYKGLNPTQRQVLQEV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH TRLGFPLRGWWQYATLNGGSFSVVARTVRAVDPSYVNDFWAAPGYEGSSDAAVKAARVQY HHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHEEEEEEEE DTTVTGLVGSPTSALTLSGVPGGDVSGADLVVTSGAAAGKSVPIGTVTGTTVGFGFGADP CCEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCEEECCCCCCC AVTGAIKPGDEVRIDNSWLLALQYYQRHQVPSSDQYGWNQYRGPNGDPLYPQRPILVGPL CEECCCCCCCEEEECCCEEEEEEHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCEEECHH LAAGAGGAAPTGHFNGKMIMLASTMDTQAYPWSADWYHKQASTALGGKLADSYRLWYMDN HHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC AEHGPDLADYTSAIPGAAAHIVGYTSALNQALLDLDAWVVRGTRPPASTTYTVDGNTQIN CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEEECCCEEEE LPAAAAQRNGVQPVVTLSANNANSGHPIDVRVGQQVTFSVQAQVPPGAGKIVRTEWDFLG CCHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEEEEECCCCCCCEEEEECCEEC AGDYPITATNQPIEAAEKLRATYSYSKPGTYFPVVRVTSQRDGNSHTPYGLIQNLAAVRI CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCEEEEE VVH EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA