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The map label for this gene is yrhP [H]

Identifier: 157964065

GI number: 157964065

Start: 5167442

End: 5168086

Strand: Reverse

Name: yrhP [H]

Synonym: Spea_4254

Alternate gene names: 157964065

Gene position: 5168086-5167442 (Counterclockwise)

Preceding gene: 157964067

Following gene: 157964063

Centisome position: 99.87

GC content: 43.41

Gene sequence:

>645_bases
ATGATGATCGATCTAGCTTTACTCCCACTGTATCTAACAACAGTCATCGCCCTACTACTGATCCCGGGGCCGGATATGTT
ACTGATAGCTAGCTCAAGCTTAAGCTATGGCCGTAAAGTTGGCGTGTATGCCAGTTTTGGTAATGCAACCTCGGGGCTTA
TTTTAACGCTATTGGCAGCGATGGGAGTATCGGCCGTTATCGCCATGAACCCAATGGCCTTGGAAGTCCTGAGAGTTTTA
GGTGGTGCCTATCTATTAAAGATGGGCTGGGACTGTATGCGCAGTTCGGCAGCTGAAGCACCAGAAATAGAACAACAAAA
TAATCTCGCCAAACTTTTATATCGCCGAGCAGTAGTGAGCAACCTACTAAACCCTAAAGCATTGATATTTTTTGTGCTGT
TTTTGCCTCAATTTGTTTCAACCCAATTAACCGCTAGCTCAGGTGAGCAAATGCTTGCCCTTGGCTTATTACTTAACGTG
ATGGGATTAGCCTTTAATCTATTGCTGGTGGCTCTAGTTGGCTCAGTTGGTAAGCCACTACTCAAAAATGAAAAATTCAG
AACTTATCAAAACAAGTTTATGGGTATGATCTTCTTTGTTCTGGCTATTTGGTTGCTCGCTTCTCAAGTGCAAAACATCA
GTTAA

Upstream 100 bases:

>100_bases
TATAGTGAGTGCTTTTACAAGCTGTATCACTTTCATTTCGACTCGATCGCTGTAAAATCCGCGCCTTGTTTTATTACCCA
ACACCTACACAGCGTAATTT

Downstream 100 bases:

>100_bases
TACCAAAAAAGCCAATAAAAAAGCGGGGAATTATCCCCGCTTTTACTTTCATAAATTTATTAACGATTACCGTATTCAAT
AATCGTTTCACGATAAAGCT

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MMIDLALLPLYLTTVIALLLIPGPDMLLIASSSLSYGRKVGVYASFGNATSGLILTLLAAMGVSAVIAMNPMALEVLRVL
GGAYLLKMGWDCMRSSAAEAPEIEQQNNLAKLLYRRAVVSNLLNPKALIFFVLFLPQFVSTQLTASSGEQMLALGLLLNV
MGLAFNLLLVALVGSVGKPLLKNEKFRTYQNKFMGMIFFVLAIWLLASQVQNIS

Sequences:

>Translated_214_residues
MMIDLALLPLYLTTVIALLLIPGPDMLLIASSSLSYGRKVGVYASFGNATSGLILTLLAAMGVSAVIAMNPMALEVLRVL
GGAYLLKMGWDCMRSSAAEAPEIEQQNNLAKLLYRRAVVSNLLNPKALIFFVLFLPQFVSTQLTASSGEQMLALGLLLNV
MGLAFNLLLVALVGSVGKPLLKNEKFRTYQNKFMGMIFFVLAIWLLASQVQNIS
>Mature_214_residues
MMIDLALLPLYLTTVIALLLIPGPDMLLIASSSLSYGRKVGVYASFGNATSGLILTLLAAMGVSAVIAMNPMALEVLRVL
GGAYLLKMGWDCMRSSAAEAPEIEQQNNLAKLLYRRAVVSNLLNPKALIFFVLFLPQFVSTQLTASSGEQMLALGLLLNV
MGLAFNLLLVALVGSVGKPLLKNEKFRTYQNKFMGMIFFVLAIWLLASQVQNIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=192, Percent_Identity=28.125, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI48994979, Length=133, Percent_Identity=33.0827067669173, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786522, Length=140, Percent_Identity=29.2857142857143, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23159; Mature: 23159

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIDLALLPLYLTTVIALLLIPGPDMLLIASSSLSYGRKVGVYASFGNATSGLILTLLAA
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHH
MGVSAVIAMNPMALEVLRVLGGAYLLKMGWDCMRSSAAEAPEIEQQNNLAKLLYRRAVVS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
NLLNPKALIFFVLFLPQFVSTQLTASSGEQMLALGLLLNVMGLAFNLLLVALVGSVGKPL
HHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LKNEKFRTYQNKFMGMIFFVLAIWLLASQVQNIS
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMIDLALLPLYLTTVIALLLIPGPDMLLIASSSLSYGRKVGVYASFGNATSGLILTLLAA
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHH
MGVSAVIAMNPMALEVLRVLGGAYLLKMGWDCMRSSAAEAPEIEQQNNLAKLLYRRAVVS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
NLLNPKALIFFVLFLPQFVSTQLTASSGEQMLALGLLLNVMGLAFNLLLVALVGSVGKPL
HHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LKNEKFRTYQNKFMGMIFFVLAIWLLASQVQNIS
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]