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The map label for this gene is ybhS [H]

Identifier: 157964012

GI number: 157964012

Start: 5097036

End: 5098181

Strand: Reverse

Name: ybhS [H]

Synonym: Spea_4201

Alternate gene names: 157964012

Gene position: 5098181-5097036 (Counterclockwise)

Preceding gene: 157964013

Following gene: 157964011

Centisome position: 98.52

GC content: 49.65

Gene sequence:

>1146_bases
ATGAAATCCCTTTATCGATTACAGGCGATAGTCGTCAAGGAGCTGACTCAGCTTAAGCGTGACAGAATGACCTTTGGCAT
GGTGATTATGATCCCGCTTATTCAGCTGATGCTATTTGGCTTTGCCATTAATACCAATATTCGCGATATCCCCGTTGGCG
TGGTGGATCAGAGCCAGACCGCCTTGAGTCGGGTGTTAGTTCAGACCATAACAGCGACCCAAGTAGTGGAGTTTACCGAG
CATTTCTATGACATCGAGGCGGCTCATGCCGCCATCGCCCGTGGTGAAGTGCGAGCGGTATTAGTGATCCCACAAGATGT
TAGCCAGCGTCTAGTGCGTCATAAAACCGTGGGGTTAGGTACGCCACCGTCTAGCGATGAAGAAACCAGCCGCCCAGTAG
CGCAGTGGATTGTGGATGGCTCAGATACCATGGTGGCTGCGGCAATCAAAGGCTTGCGCGCCATGCCGCTAACAGAGTTA
CTTGGCATGCCAGCAAACCGCATGACACCGACCTTTGAGGTGGCGCTATTTTATAACCCAGAGCAGCGCACTGCGGTAAA
TATTGTACCTGGGCTGGTGGGCGTGATCCTCACTATGACCATGATCATGTTTACCTCGGCAGCCATAGTGCGCGAGCGAG
AACGTGGCAACTTAGAGATGCTGATCACCACCCCAATCCGTTCCATAGAGCTGATGCTGGGCAAAATCATCCCCTATATG
TTTATCGGGATCCTACAGGTAATCATCATTCTTGGCTTGGGATATAGCGTTTTCAATGTGCCGATAAACGGTAGCCTATT
GCAGTTAGCTGGGGCGACTCTACTGTTTATTATGGCGAGTTTAACCTTAGGTTTAGTTATCTCGACCATAGCCAAAAGCC
AGCTGCAATCGATGCAGATGACCATTTTTGTGCTGCTACCGTCGATTTTGCTATCGGGCTTTATGTTCCCCTACGAGGGC
ATGCCGATAGAGGCGCAGTATATTGCTGAGGCGTTACCCGCGACTCACTTTATGCGCTTGATCCGTGGCGTAGTGCTGCG
TGATGTTGAAATTATCGATATGACTTACGATGTGACTTGGTTGGCGATATTTACTGTCATTGGCTTAATTGTGGCGTCGA
TGCGCTTTAAAAAGAATCTCGGTTAA

Upstream 100 bases:

>100_bases
GTTTTTTAAGTGAAAAACAATCCTTGGGCTTGGATACGCTAACACTGGTGCGACCTAGCCTAGAAGATGTATTCGTCACT
TGTACGGGGAAGGGGCGCCA

Downstream 100 bases:

>100_bases
TTTAACCTAGCTTCAGTAGCCTTAGTTAATAGTGATTGACTTAATATTTTGTTTTTATGCTTAATAAGTTGGGTGGTTGA
CTTATTTTTGAATAAATAAT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKSLYRLQAIVVKELTQLKRDRMTFGMVIMIPLIQLMLFGFAINTNIRDIPVGVVDQSQTALSRVLVQTITATQVVEFTE
HFYDIEAAHAAIARGEVRAVLVIPQDVSQRLVRHKTVGLGTPPSSDEETSRPVAQWIVDGSDTMVAAAIKGLRAMPLTEL
LGMPANRMTPTFEVALFYNPEQRTAVNIVPGLVGVILTMTMIMFTSAAIVRERERGNLEMLITTPIRSIELMLGKIIPYM
FIGILQVIIILGLGYSVFNVPINGSLLQLAGATLLFIMASLTLGLVISTIAKSQLQSMQMTIFVLLPSILLSGFMFPYEG
MPIEAQYIAEALPATHFMRLIRGVVLRDVEIIDMTYDVTWLAIFTVIGLIVASMRFKKNLG

Sequences:

>Translated_381_residues
MKSLYRLQAIVVKELTQLKRDRMTFGMVIMIPLIQLMLFGFAINTNIRDIPVGVVDQSQTALSRVLVQTITATQVVEFTE
HFYDIEAAHAAIARGEVRAVLVIPQDVSQRLVRHKTVGLGTPPSSDEETSRPVAQWIVDGSDTMVAAAIKGLRAMPLTEL
LGMPANRMTPTFEVALFYNPEQRTAVNIVPGLVGVILTMTMIMFTSAAIVRERERGNLEMLITTPIRSIELMLGKIIPYM
FIGILQVIIILGLGYSVFNVPINGSLLQLAGATLLFIMASLTLGLVISTIAKSQLQSMQMTIFVLLPSILLSGFMFPYEG
MPIEAQYIAEALPATHFMRLIRGVVLRDVEIIDMTYDVTWLAIFTVIGLIVASMRFKKNLG
>Mature_381_residues
MKSLYRLQAIVVKELTQLKRDRMTFGMVIMIPLIQLMLFGFAINTNIRDIPVGVVDQSQTALSRVLVQTITATQVVEFTE
HFYDIEAAHAAIARGEVRAVLVIPQDVSQRLVRHKTVGLGTPPSSDEETSRPVAQWIVDGSDTMVAAAIKGLRAMPLTEL
LGMPANRMTPTFEVALFYNPEQRTAVNIVPGLVGVILTMTMIMFTSAAIVRERERGNLEMLITTPIRSIELMLGKIIPYM
FIGILQVIIILGLGYSVFNVPINGSLLQLAGATLLFIMASLTLGLVISTIAKSQLQSMQMTIFVLLPSILLSGFMFPYEG
MPIEAQYIAEALPATHFMRLIRGVVLRDVEIIDMTYDVTWLAIFTVIGLIVASMRFKKNLG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=352, Percent_Identity=30.1136363636364, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI48994943, Length=361, Percent_Identity=27.4238227146814, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1787010, Length=373, Percent_Identity=25.7372654155496, Blast_Score=131, Evalue=7e-32,
Organism=Escherichia coli, GI226510979, Length=401, Percent_Identity=23.6907730673317, Blast_Score=82, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24650855, Length=408, Percent_Identity=22.3039215686275, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24650853, Length=403, Percent_Identity=21.3399503722084, Blast_Score=88, Evalue=8e-18,
Organism=Drosophila melanogaster, GI85725260, Length=410, Percent_Identity=21.219512195122, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85725262, Length=410, Percent_Identity=21.219512195122, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42130; Mature: 42130

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLYRLQAIVVKELTQLKRDRMTFGMVIMIPLIQLMLFGFAINTNIRDIPVGVVDQSQT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
ALSRVLVQTITATQVVEFTEHFYDIEAAHAAIARGEVRAVLVIPQDVSQRLVRHKTVGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHCCCC
TPPSSDEETSRPVAQWIVDGSDTMVAAAIKGLRAMPLTELLGMPANRMTPTFEVALFYNP
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEEEECC
EQRTAVNIVPGLVGVILTMTMIMFTSAAIVRERERGNLEMLITTPIRSIELMLGKIIPYM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH
FIGILQVIIILGLGYSVFNVPINGSLLQLAGATLLFIMASLTLGLVISTIAKSQLQSMQM
HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIFVLLPSILLSGFMFPYEGMPIEAQYIAEALPATHFMRLIRGVVLRDVEIIDMTYDVTW
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEHHHHH
LAIFTVIGLIVASMRFKKNLG
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSLYRLQAIVVKELTQLKRDRMTFGMVIMIPLIQLMLFGFAINTNIRDIPVGVVDQSQT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
ALSRVLVQTITATQVVEFTEHFYDIEAAHAAIARGEVRAVLVIPQDVSQRLVRHKTVGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHCCCC
TPPSSDEETSRPVAQWIVDGSDTMVAAAIKGLRAMPLTELLGMPANRMTPTFEVALFYNP
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEEEECC
EQRTAVNIVPGLVGVILTMTMIMFTSAAIVRERERGNLEMLITTPIRSIELMLGKIIPYM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH
FIGILQVIIILGLGYSVFNVPINGSLLQLAGATLLFIMASLTLGLVISTIAKSQLQSMQM
HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIFVLLPSILLSGFMFPYEGMPIEAQYIAEALPATHFMRLIRGVVLRDVEIIDMTYDVTW
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEHHHHH
LAIFTVIGLIVASMRFKKNLG
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]