| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157964010
Identifier: 157964010
GI number: 157964010
Start: 5094913
End: 5095860
Strand: Direct
Name: 157964010
Synonym: Spea_4199
Alternate gene names: NA
Gene position: 5094913-5095860 (Clockwise)
Preceding gene: 157964009
Following gene: 157964021
Centisome position: 98.46
GC content: 48.1
Gene sequence:
>948_bases ATGAACAAACACCTTGTTATGGTGATGCTACTCAGTGCAATCACCCTTAATGCCTGGGCCAACAATACTAGCGACACGAC CGACATCGAACGCCAACAACCTGCTCACTGGAGTCACCTGCCGATTTGGGGCGATAAGGCTCGCGAGCTTGGATATGAGC TCCCTATTCCTGTTGGCCTGAATATCTACTATAACAAGCAGTCTGTTGCTTATGATGCCAAAGACAACTTCAATCTTGGT CTAACCGGTAGTGGTTGGTTGAACAAAATTAATGCCGATGTAGTGATCCCAGCCGATGACGTGATCATTACCGGCGAAGA TGAAAGTATTCAGCTTAGAGCCGATGCTTGGGTGCTGCCATTCCTTAACGTCTATGGCCTTGCAGGCTATACCAAGGGGC ATAAAGATATCCTTGCCGATCTAAGCAATGCCGAAGTCATGGTTAACGGTAGCTTAGTTAGCAATGGACTAAACATGACG CTACCAATCCCTATCGAGTACACCGCCTATAACTTAGGCTTTGGTGCGGTGCTGGCAGGGCAAGCCGAGGTGATCCCTGG CATGCATCCGTTTATCTTTACCGGTGTAGCGGCATTTACCAACTCTTGGACCACGACTACCGACAGCACGATTCAAACCT ATATCGGCTCAATCCGTATGGGACAAAGATATGATGTGGGCGGTGATAAACTGGCTTTCTTAGTCGGCTACAACTACCAG ATGATCAATCAGAAGATTGGTGGCAGCTACGACTTCAATATTCCGTTACTGGGGCGTCCAGGTGGAATTGTCATCGACTA TGATGTGCACTTAGTCAGCTCAGAAAGCCACAATATGTCGGTGAGCATGGTGTACGATTTTGGCCCTAAAGATGAGTGGA ATGTGTTTATCGAGTACGGCTTCTTAAACTGGGATCAGCTACTACTCTCGGTTGGTCGCCGCTTCTGA
Upstream 100 bases:
>100_bases AGGATGAACGTACGCGTTGATCTTGGCTTTAGTGACGGCGACAGCGGTTTCTACCTCACCTTTACCGAAGCTTTTTAATT TAATCCAGAGATCGAAATAA
Downstream 100 bases:
>100_bases TCCCGAGCAATAACCCCGAGCAATGTTACTCGCGCTCTAATTAGAGCGCTGCAGGCTCAAAGTGCTCGCTTAAGCAGGCA TTTTGAGTCTCTTCATTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MNKHLVMVMLLSAITLNAWANNTSDTTDIERQQPAHWSHLPIWGDKARELGYELPIPVGLNIYYNKQSVAYDAKDNFNLG LTGSGWLNKINADVVIPADDVIITGEDESIQLRADAWVLPFLNVYGLAGYTKGHKDILADLSNAEVMVNGSLVSNGLNMT LPIPIEYTAYNLGFGAVLAGQAEVIPGMHPFIFTGVAAFTNSWTTTTDSTIQTYIGSIRMGQRYDVGGDKLAFLVGYNYQ MINQKIGGSYDFNIPLLGRPGGIVIDYDVHLVSSESHNMSVSMVYDFGPKDEWNVFIEYGFLNWDQLLLSVGRRF
Sequences:
>Translated_315_residues MNKHLVMVMLLSAITLNAWANNTSDTTDIERQQPAHWSHLPIWGDKARELGYELPIPVGLNIYYNKQSVAYDAKDNFNLG LTGSGWLNKINADVVIPADDVIITGEDESIQLRADAWVLPFLNVYGLAGYTKGHKDILADLSNAEVMVNGSLVSNGLNMT LPIPIEYTAYNLGFGAVLAGQAEVIPGMHPFIFTGVAAFTNSWTTTTDSTIQTYIGSIRMGQRYDVGGDKLAFLVGYNYQ MINQKIGGSYDFNIPLLGRPGGIVIDYDVHLVSSESHNMSVSMVYDFGPKDEWNVFIEYGFLNWDQLLLSVGRRF >Mature_315_residues MNKHLVMVMLLSAITLNAWANNTSDTTDIERQQPAHWSHLPIWGDKARELGYELPIPVGLNIYYNKQSVAYDAKDNFNLG LTGSGWLNKINADVVIPADDVIITGEDESIQLRADAWVLPFLNVYGLAGYTKGHKDILADLSNAEVMVNGSLVSNGLNMT LPIPIEYTAYNLGFGAVLAGQAEVIPGMHPFIFTGVAAFTNSWTTTTDSTIQTYIGSIRMGQRYDVGGDKLAFLVGYNYQ MINQKIGGSYDFNIPLLGRPGGIVIDYDVHLVSSESHNMSVSMVYDFGPKDEWNVFIEYGFLNWDQLLLSVGRRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34874; Mature: 34874
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHLVMVMLLSAITLNAWANNTSDTTDIERQQPAHWSHLPIWGDKARELGYELPIPVGL CCCCEEHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCE NIYYNKQSVAYDAKDNFNLGLTGSGWLNKINADVVIPADDVIITGEDESIQLRADAWVLP EEEECCCEEEEECCCCCEEEEECCCCCEECCCCEEECCCCEEEECCCCEEEEEECEEEEC FLNVYGLAGYTKGHKDILADLSNAEVMVNGSLVSNGLNMTLPIPIEYTAYNLGFGAVLAG HHHHHCCCCCCCCCHHHHHCCCCCEEEEECEEEECCCCEEEECEEEEEEEECCCCEEEEC QAEVIPGMHPFIFTGVAAFTNSWTTTTDSTIQTYIGSIRMGQRYDVGGDKLAFLVGYNYQ CHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCEECCCCCEEEEEEECCEE MINQKIGGSYDFNIPLLGRPGGIVIDYDVHLVSSESHNMSVSMVYDFGPKDEWNVFIEYG EEHHHCCCCEECCEEEEECCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEC FLNWDQLLLSVGRRF CCCHHHHHHHHCCCC >Mature Secondary Structure MNKHLVMVMLLSAITLNAWANNTSDTTDIERQQPAHWSHLPIWGDKARELGYELPIPVGL CCCCEEHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCE NIYYNKQSVAYDAKDNFNLGLTGSGWLNKINADVVIPADDVIITGEDESIQLRADAWVLP EEEECCCEEEEECCCCCEEEEECCCCCEECCCCEEECCCCEEEECCCCEEEEEECEEEEC FLNVYGLAGYTKGHKDILADLSNAEVMVNGSLVSNGLNMTLPIPIEYTAYNLGFGAVLAG HHHHHCCCCCCCCCHHHHHCCCCCEEEEECEEEECCCCEEEECEEEEEEEECCCCEEEEC QAEVIPGMHPFIFTGVAAFTNSWTTTTDSTIQTYIGSIRMGQRYDVGGDKLAFLVGYNYQ CHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCEECCCCCEEEEEEECCEE MINQKIGGSYDFNIPLLGRPGGIVIDYDVHLVSSESHNMSVSMVYDFGPKDEWNVFIEYG EEHHHCCCCEECCEEEEECCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEC FLNWDQLLLSVGRRF CCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA