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The map label for this gene is 157963987

Identifier: 157963987

GI number: 157963987

Start: 5070783

End: 5072054

Strand: Reverse

Name: 157963987

Synonym: Spea_4176

Alternate gene names: NA

Gene position: 5072054-5070783 (Counterclockwise)

Preceding gene: 157963990

Following gene: 157963986

Centisome position: 98.02

GC content: 45.28

Gene sequence:

>1272_bases
ATGTTCGATATCCCTAAGGATAGGAGTCGGTTAAATAAAACAAGCTGGTTTTTATTTATCGTTATTGGAATTACCTGCGC
GATTTTTATTATTTCTTTAGCGAGCCGTCAGGCCTTCTCTTCTAATCACGCCAATAGTGATTCCCTCGTTTCAAGCGTCA
AAAATGCTTCCCTAAATATTACCATTTCGGGTTATGGCAAGTTTGTTCCAAGAACTCAGCGTGGTATCAATGCGCTCAGT
GGTGGCCACATTGTTGAGGTGTTTAAAAAGCCCGGAAACTTGGTAGAAGAAGGCGAAATCATCTTAAGCCTTAATAATCC
TAAATTACTTCGCTTGCTTGAAACCAGTGAGCTGGCCTTATTAGAAGAGCAGGCAAATCAGCAAAGGGTCATGGCGGAGT
CAGCCCAAGAATTAGAGGATCAACGAGGCAAAATCCGGCTTGCAAAAGTAAGACTCGCCCTAGCGGATGCCGAGTTGATT
GCCCATAAAAAACTAAAAGATAACCAAGTTATCTCGACCTTAGACTTGCATAAAGCACTGGTTGCCTGGGAACAGGAAGA
TGCCATGCTACAGATGGAGTTGAGTCGTTTTCAGACCCTAAAGAAAACACGCAAAGCCATTGAGGACTCCACTCGGTATC
GTTTGGAGAAAGCCATTAAGCAGCAAGAGCTGTTGCTATCGGAGGTTGAGCAGCTTGATGTTCGTGCGAGCATGGCAGGT
ATGTTGACGGAGTTAGCCGATGAACTCGAGATAGGTCGCCATGTTGAAGAGGGACGAGCGGTGGGCATGATCGCGGATCT
TTCATCTTATTATGCCCGTATCAATATTACCGCTGCCGATGCTGAATATGTCAGTCCAAGTTTAGTGGCTCAGGTTCAGT
TTAAGGGAGTGGAAATAAAGGGGCTGGTTTCTCGTGTCGACCCAACGGTGAATAATGGTAGCGTTGAAATTGATATTAGT
TTTAGTGGTGATTTGCCTGCAGCGGTTAGACCTAATATCGATGTGACCGCACGGGTTGATATTGCTGAGCATCACAATAC
GCTTGTCGTCGATAGACCTGTCGGGGTTGTTCGCGCTCATCGTGAGTACCCTATGTTCGTGCTCGATCAGACCCATTCCC
ACTTCCAGCGTCGTCATGTATTGGTCGGTGATATTGCTGGCGATCAGATGCAAGTGTTAGATGGCCTCTATCTTGGGGAC
ACAGTTTTACTCAATGTCCCTAAACATCTGGTCAATTCTTCTCAAATTATGACGGAAGATGTTTATGAATAA

Upstream 100 bases:

>100_bases
ATGTTGCGAGCATGCTGTCAAGAGCTTGTTGTTGTGTTGTTTTTTTATTGGTTATTCCGTATTGTTGGGAGCTGATAACA
AAATTAAATGGAATTTGATT

Downstream 100 bases:

>100_bases
CTGTGTAATCAGTCTGACCGATTTAAATAAATCGTTTATTAATGGCGCTGGCAGCAATCATGTTTTGAAGCAGGTGAATT
TTTCGGTATATAGCGGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; ABC Transporter Permease; Secretion Protein HlyD; HlyD Family Secretion Protein

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MFDIPKDRSRLNKTSWFLFIVIGITCAIFIISLASRQAFSSNHANSDSLVSSVKNASLNITISGYGKFVPRTQRGINALS
GGHIVEVFKKPGNLVEEGEIILSLNNPKLLRLLETSELALLEEQANQQRVMAESAQELEDQRGKIRLAKVRLALADAELI
AHKKLKDNQVISTLDLHKALVAWEQEDAMLQMELSRFQTLKKTRKAIEDSTRYRLEKAIKQQELLLSEVEQLDVRASMAG
MLTELADELEIGRHVEEGRAVGMIADLSSYYARINITAADAEYVSPSLVAQVQFKGVEIKGLVSRVDPTVNNGSVEIDIS
FSGDLPAAVRPNIDVTARVDIAEHHNTLVVDRPVGVVRAHREYPMFVLDQTHSHFQRRHVLVGDIAGDQMQVLDGLYLGD
TVLLNVPKHLVNSSQIMTEDVYE

Sequences:

>Translated_423_residues
MFDIPKDRSRLNKTSWFLFIVIGITCAIFIISLASRQAFSSNHANSDSLVSSVKNASLNITISGYGKFVPRTQRGINALS
GGHIVEVFKKPGNLVEEGEIILSLNNPKLLRLLETSELALLEEQANQQRVMAESAQELEDQRGKIRLAKVRLALADAELI
AHKKLKDNQVISTLDLHKALVAWEQEDAMLQMELSRFQTLKKTRKAIEDSTRYRLEKAIKQQELLLSEVEQLDVRASMAG
MLTELADELEIGRHVEEGRAVGMIADLSSYYARINITAADAEYVSPSLVAQVQFKGVEIKGLVSRVDPTVNNGSVEIDIS
FSGDLPAAVRPNIDVTARVDIAEHHNTLVVDRPVGVVRAHREYPMFVLDQTHSHFQRRHVLVGDIAGDQMQVLDGLYLGD
TVLLNVPKHLVNSSQIMTEDVYE
>Mature_423_residues
MFDIPKDRSRLNKTSWFLFIVIGITCAIFIISLASRQAFSSNHANSDSLVSSVKNASLNITISGYGKFVPRTQRGINALS
GGHIVEVFKKPGNLVEEGEIILSLNNPKLLRLLETSELALLEEQANQQRVMAESAQELEDQRGKIRLAKVRLALADAELI
AHKKLKDNQVISTLDLHKALVAWEQEDAMLQMELSRFQTLKKTRKAIEDSTRYRLEKAIKQQELLLSEVEQLDVRASMAG
MLTELADELEIGRHVEEGRAVGMIADLSSYYARINITAADAEYVSPSLVAQVQFKGVEIKGLVSRVDPTVNNGSVEIDIS
FSGDLPAAVRPNIDVTARVDIAEHHNTLVVDRPVGVVRAHREYPMFVLDQTHSHFQRRHVLVGDIAGDQMQVLDGLYLGD
TVLLNVPKHLVNSSQIMTEDVYE

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47110; Mature: 47110

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDIPKDRSRLNKTSWFLFIVIGITCAIFIISLASRQAFSSNHANSDSLVSSVKNASLNI
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEE
TISGYGKFVPRTQRGINALSGGHIVEVFKKPGNLVEEGEIILSLNNPKLLRLLETSELAL
EEECCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECHHHHHH
LEEQANQQRVMAESAQELEDQRGKIRLAKVRLALADAELIAHKKLKDNQVISTLDLHKAL
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHH
VAWEQEDAMLQMELSRFQTLKKTRKAIEDSTRYRLEKAIKQQELLLSEVEQLDVRASMAG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLTELADELEIGRHVEEGRAVGMIADLSSYYARINITAADAEYVSPSLVAQVQFKGVEIK
HHHHHHHHHHHHCHHHCCCEEEEHHHHHCCEEEEEEEECCCCCCCCHHEEEEEECCEEHH
GLVSRVDPTVNNGSVEIDISFSGDLPAAVRPNIDVTARVDIAEHHNTLVVDRPVGVVRAH
HHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCHHEECC
REYPMFVLDQTHSHFQRRHVLVGDIAGDQMQVLDGLYLGDTVLLNVPKHLVNSSQIMTED
CCCCEEEEECCHHHHHHCCEEEEECCCCHHHHHCCEEECCEEEEECCHHHCCCCHHHHHH
VYE
CCC
>Mature Secondary Structure
MFDIPKDRSRLNKTSWFLFIVIGITCAIFIISLASRQAFSSNHANSDSLVSSVKNASLNI
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEE
TISGYGKFVPRTQRGINALSGGHIVEVFKKPGNLVEEGEIILSLNNPKLLRLLETSELAL
EEECCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECHHHHHH
LEEQANQQRVMAESAQELEDQRGKIRLAKVRLALADAELIAHKKLKDNQVISTLDLHKAL
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHH
VAWEQEDAMLQMELSRFQTLKKTRKAIEDSTRYRLEKAIKQQELLLSEVEQLDVRASMAG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLTELADELEIGRHVEEGRAVGMIADLSSYYARINITAADAEYVSPSLVAQVQFKGVEIK
HHHHHHHHHHHHCHHHCCCEEEEHHHHHCCEEEEEEEECCCCCCCCHHEEEEEECCEEHH
GLVSRVDPTVNNGSVEIDISFSGDLPAAVRPNIDVTARVDIAEHHNTLVVDRPVGVVRAH
HHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCHHEECC
REYPMFVLDQTHSHFQRRHVLVGDIAGDQMQVLDGLYLGDTVLLNVPKHLVNSSQIMTED
CCCCEEEEECCHHHHHHCCEEEEECCCCHHHHHCCEEECCEEEEECCHHHCCCCHHHHHH
VYE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA