| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963985
Identifier: 157963985
GI number: 157963985
Start: 5067715
End: 5070093
Strand: Reverse
Name: 157963985
Synonym: Spea_4174
Alternate gene names: NA
Gene position: 5070093-5067715 (Counterclockwise)
Preceding gene: 157963986
Following gene: 157963984
Centisome position: 97.98
GC content: 42.79
Gene sequence:
>2379_bases ATGCTGTTTGATGTGATTTATGGTTGGCGTAAGTGGCAAGGTCAGCGTGGGTTCTGGTGCTTGTTAGTTGTCAGCCTCTG TCTATTTTGCTGCTTAATCGGTTTGGTGGTTAACCTATTTTGGCTGTTGAGTAGCGATCGCCCACTGTGGGTAGGCAATC AGCAATCTATGATCACCATTGCTAGTAAAGACCTTAGTGGCAATCTACAACCGACTTCTGGCTATGATATTGATTTAGTG CAGAGGCTTACAGGTGTAGAAAGTGTCGCGAGTATAGCGATTCAATCCAGCTTAGTGACAATAGGACTAAAGGAGTTGCC AAGGGTAACTATTGGTTTCTATTCACAAAATACTATCGAACTACTCGGGTTAGCCGCACCATTTTCGATGCAAAACTTTG AGTCGAGAAAAGGCATAGTGTCACAGCGATTTTGGCAACAACATTTAGAATCAAACTCTTCATTAAAAGAAAGTCGCTTA TATTATCGAGATAGCGCTTTTCTTATTGCCGGTATTGCGCCGCAAACTATGCTGCGCTTGGGTGACGTTAGTGTTGATAT TTGGCTCCCTGATACTTATTTGCAGCTTGGGGTTCCGGATATGTTTGTTGATAATCCGGAGCCTTATTTAAAGACTAGAA GTAACCGCTACGGCTTTGCACAATTAAGTGAGCAAGCGAATGTTGAGTCACTTCAAGATGCATATATCAATTTAAGACAA CAGACTCCTTGGCCTGATAGCGGGTTTTCTGACAATTATTATCATCCTTGGTTGATTAGTGGGGTGGAGCTCAACCCTAA TGGCCGTGATATTTTGCAAAGGCAGGCGTGGATACTCCTTCTTCTACTCGTTGGTTTCGGCTTTATTATTTTTAGCGGCA TTGTCTCCGCCTACACACAGCAAGGCATAACGCGCAGTGCTGAAATGAGTCTGAAGTTGGCTTTAGGTGGTTGCAGGCGT GGGCTCATGGGCCAGCTATTGAGAGAGAACATCCCCGCTCTAGTCTTAGTCGGAGGGCTTAGCCCTTTACTCGGGCTGAT TGTCACCCACTATGTTGGCACAATTGGTGTGTATCAAGAATACTTTGTCGAAGGAGTTAAGTTTAATTTTTGGCTTTGGT TGGTCGCTGTTTCTTGCTCGCTTTGGTTATTCATTTGTTGTGCCTTGTTTCCTCTTAGTGGCTCAATCAATAAACTTTTC TCTCGAGGCAAGCAGGGTCATATGACCAAGATGCAGCAAGGTGTTAGGCAACTAGTATTGGTGTTGCAACTGGCGGTTAT TACTGGTGTTTTGCTGGTATCGTTAAGCCTCATGTATCAAGAGTTACAGAAATATTCGTCAGTGGTTATCGCCAAAGACG TTACCAGTTACAAACCTAAAGTGGATGGTCGTTTAAGTGTAATGTTGACCTCTGAGCAGCTCGATGGTGAATGGCGAGTC GATGGTTCACCCATCGCATTATCTTCAGCTCCGTTCACTCAATTAGGTGCGCCATCATTAAAATATCAATCGGAATCTGG AGTTGCGCTAGAAAAGCCGATTAATGGTTTATATGTTTCTCATAACTTCTTTCGTTTATTAGGTATTCCACTCTTATCTC GAGGTGATTTAGCCGAAAATACGGTAATGATTAACCGTTCTATGGCATCACAGTTAGCAATAGAGTTAGGCCTAAATGAT TGGAGAGCCGTTAAGGGCTTAGCGTTAAAGGTTTCTGGTTTTTATTACGAAAAGCATGTTCGGGTAGCAGGGATTGTGAG TGACACGGCCCATTTTGGTATTGCCAATGAGGCGAAACCACTCATTTACTTGAGCCTTAAAGATCAAAATCCACTCCTTT CCAGTCGTATTGCTCCAGTTTTTTATAGTAAGGGGGGCAATAAAGAGGTGATAGCATCTCACTTAAATGACTGGGCCTTA TTGTTATCACCCAAGCTGAGTTATGTGAAAGGGCAAAGTGTCGTTAAGCAGATTGAAGACACGGATACTGCTGGAAAACT GCTATTTTTGACGTCAAGTTCCATGGCTTTACTGATCATTTTTCTCGTCATATTTACGCTTTATAACAAGTTTAGCTATG CCGTTAAAAGTGAACAAATGAAATGGGCGATCATGCTAGCCGTTGGAGGAAAAAAAGAAGCCTTAATGGCTCAAATGGTA TGGGCCAACGCGTTATTGGCCATGGTATCTATCTTGCTGACTTTAGGCGTGTTTATATTACTAGAGAGCTATACTCAGTC ACTCGTTAATGTCTCTTTATTTCAACCGTTAATATGGGCTGTTTGCATCGCCTTAACCCTGCTTTTCATTGTTGTGATCA CCCTATGGGCAGCCAGAGGCTTACTGAAACAAAACATCAGTGTATTACTTCGGGGTTAA
Upstream 100 bases:
>100_bases CTGATTATTACCCATGATCCAGCCGTCGCAGCCTATTGCCAAAAAGCGTACAAAATTCATGATGGAGAAATTGCCGCAGT TTCGCCTCTGGAGTTTAAAC
Downstream 100 bases:
>100_bases GATATTCACATTCGCCTGAGCTTGAGCAAAGTCGTGGTGCTTCGCCCCACATTGGTAATGCATCAGGCTACGCCTGACCT CTAAGCTAGACTTTGTCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 792; Mature: 792
Protein sequence:
>792_residues MLFDVIYGWRKWQGQRGFWCLLVVSLCLFCCLIGLVVNLFWLLSSDRPLWVGNQQSMITIASKDLSGNLQPTSGYDIDLV QRLTGVESVASIAIQSSLVTIGLKELPRVTIGFYSQNTIELLGLAAPFSMQNFESRKGIVSQRFWQQHLESNSSLKESRL YYRDSAFLIAGIAPQTMLRLGDVSVDIWLPDTYLQLGVPDMFVDNPEPYLKTRSNRYGFAQLSEQANVESLQDAYINLRQ QTPWPDSGFSDNYYHPWLISGVELNPNGRDILQRQAWILLLLLVGFGFIIFSGIVSAYTQQGITRSAEMSLKLALGGCRR GLMGQLLRENIPALVLVGGLSPLLGLIVTHYVGTIGVYQEYFVEGVKFNFWLWLVAVSCSLWLFICCALFPLSGSINKLF SRGKQGHMTKMQQGVRQLVLVLQLAVITGVLLVSLSLMYQELQKYSSVVIAKDVTSYKPKVDGRLSVMLTSEQLDGEWRV DGSPIALSSAPFTQLGAPSLKYQSESGVALEKPINGLYVSHNFFRLLGIPLLSRGDLAENTVMINRSMASQLAIELGLND WRAVKGLALKVSGFYYEKHVRVAGIVSDTAHFGIANEAKPLIYLSLKDQNPLLSSRIAPVFYSKGGNKEVIASHLNDWAL LLSPKLSYVKGQSVVKQIEDTDTAGKLLFLTSSSMALLIIFLVIFTLYNKFSYAVKSEQMKWAIMLAVGGKKEALMAQMV WANALLAMVSILLTLGVFILLESYTQSLVNVSLFQPLIWAVCIALTLLFIVVITLWAARGLLKQNISVLLRG
Sequences:
>Translated_792_residues MLFDVIYGWRKWQGQRGFWCLLVVSLCLFCCLIGLVVNLFWLLSSDRPLWVGNQQSMITIASKDLSGNLQPTSGYDIDLV QRLTGVESVASIAIQSSLVTIGLKELPRVTIGFYSQNTIELLGLAAPFSMQNFESRKGIVSQRFWQQHLESNSSLKESRL YYRDSAFLIAGIAPQTMLRLGDVSVDIWLPDTYLQLGVPDMFVDNPEPYLKTRSNRYGFAQLSEQANVESLQDAYINLRQ QTPWPDSGFSDNYYHPWLISGVELNPNGRDILQRQAWILLLLLVGFGFIIFSGIVSAYTQQGITRSAEMSLKLALGGCRR GLMGQLLRENIPALVLVGGLSPLLGLIVTHYVGTIGVYQEYFVEGVKFNFWLWLVAVSCSLWLFICCALFPLSGSINKLF SRGKQGHMTKMQQGVRQLVLVLQLAVITGVLLVSLSLMYQELQKYSSVVIAKDVTSYKPKVDGRLSVMLTSEQLDGEWRV DGSPIALSSAPFTQLGAPSLKYQSESGVALEKPINGLYVSHNFFRLLGIPLLSRGDLAENTVMINRSMASQLAIELGLND WRAVKGLALKVSGFYYEKHVRVAGIVSDTAHFGIANEAKPLIYLSLKDQNPLLSSRIAPVFYSKGGNKEVIASHLNDWAL LLSPKLSYVKGQSVVKQIEDTDTAGKLLFLTSSSMALLIIFLVIFTLYNKFSYAVKSEQMKWAIMLAVGGKKEALMAQMV WANALLAMVSILLTLGVFILLESYTQSLVNVSLFQPLIWAVCIALTLLFIVVITLWAARGLLKQNISVLLRG >Mature_792_residues MLFDVIYGWRKWQGQRGFWCLLVVSLCLFCCLIGLVVNLFWLLSSDRPLWVGNQQSMITIASKDLSGNLQPTSGYDIDLV QRLTGVESVASIAIQSSLVTIGLKELPRVTIGFYSQNTIELLGLAAPFSMQNFESRKGIVSQRFWQQHLESNSSLKESRL YYRDSAFLIAGIAPQTMLRLGDVSVDIWLPDTYLQLGVPDMFVDNPEPYLKTRSNRYGFAQLSEQANVESLQDAYINLRQ QTPWPDSGFSDNYYHPWLISGVELNPNGRDILQRQAWILLLLLVGFGFIIFSGIVSAYTQQGITRSAEMSLKLALGGCRR GLMGQLLRENIPALVLVGGLSPLLGLIVTHYVGTIGVYQEYFVEGVKFNFWLWLVAVSCSLWLFICCALFPLSGSINKLF SRGKQGHMTKMQQGVRQLVLVLQLAVITGVLLVSLSLMYQELQKYSSVVIAKDVTSYKPKVDGRLSVMLTSEQLDGEWRV DGSPIALSSAPFTQLGAPSLKYQSESGVALEKPINGLYVSHNFFRLLGIPLLSRGDLAENTVMINRSMASQLAIELGLND WRAVKGLALKVSGFYYEKHVRVAGIVSDTAHFGIANEAKPLIYLSLKDQNPLLSSRIAPVFYSKGGNKEVIASHLNDWAL LLSPKLSYVKGQSVVKQIEDTDTAGKLLFLTSSSMALLIIFLVIFTLYNKFSYAVKSEQMKWAIMLAVGGKKEALMAQMV WANALLAMVSILLTLGVFILLESYTQSLVNVSLFQPLIWAVCIALTLLFIVVITLWAARGLLKQNISVLLRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88022; Mature: 88022
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFDVIYGWRKWQGQRGFWCLLVVSLCLFCCLIGLVVNLFWLLSSDRPLWVGNQQSMITI CEEHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEE ASKDLSGNLQPTSGYDIDLVQRLTGVESVASIAIQSSLVTIGLKELPRVTIGFYSQNTIE EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE LLGLAAPFSMQNFESRKGIVSQRFWQQHLESNSSLKESRLYYRDSAFLIAGIAPQTMLRL EEEECCCCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHEEECCCEEEECCCHHHHHHH GDVSVDIWLPDTYLQLGVPDMFVDNPEPYLKTRSNRYGFAQLSEQANVESLQDAYINLRQ CCEEEEEEECCHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHC QTPWPDSGFSDNYYHPWLISGVELNPNGRDILQRQAWILLLLLVGFGFIIFSGIVSAYTQ CCCCCCCCCCCCCCCCEEEECEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGITRSAEMSLKLALGGCRRGLMGQLLRENIPALVLVGGLSPLLGLIVTHYVGTIGVYQE HCCCCCHHCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH YFVEGVKFNFWLWLVAVSCSLWLFICCALFPLSGSINKLFSRGKQGHMTKMQQGVRQLVL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH VLQLAVITGVLLVSLSLMYQELQKYSSVVIAKDVTSYKPKVDGRLSVMLTSEQLDGEWRV HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEE DGSPIALSSAPFTQLGAPSLKYQSESGVALEKPINGLYVSHNFFRLLGIPLLSRGDLAEN CCCCEEECCCCCHHCCCCCCCCCCCCCCEEECCCCCEEECCHHHHHHCCCCCCCCCCCCC TVMINRSMASQLAIELGLNDWRAVKGLALKVSGFYYEKHVRVAGIVSDTAHFGIANEAKP EEEEEHHHHHHHHHHHCCCHHHHHCCEEEEEECEEEECCEEEEEEEECHHHCCCCCCCCC LIYLSLKDQNPLLSSRIAPVFYSKGGNKEVIASHLNDWALLLSPKLSYVKGQSVVKQIED EEEEEECCCCCCHHHCCCCEEECCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHC TDTAGKLLFLTSSSMALLIIFLVIFTLYNKFSYAVKSEQMKWAIMLAVGGKKEALMAQMV CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHH WANALLAMVSILLTLGVFILLESYTQSLVNVSLFQPLIWAVCIALTLLFIVVITLWAARG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKQNISVLLRG HHHCCHHHEECC >Mature Secondary Structure MLFDVIYGWRKWQGQRGFWCLLVVSLCLFCCLIGLVVNLFWLLSSDRPLWVGNQQSMITI CEEHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEE ASKDLSGNLQPTSGYDIDLVQRLTGVESVASIAIQSSLVTIGLKELPRVTIGFYSQNTIE EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE LLGLAAPFSMQNFESRKGIVSQRFWQQHLESNSSLKESRLYYRDSAFLIAGIAPQTMLRL EEEECCCCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHEEECCCEEEECCCHHHHHHH GDVSVDIWLPDTYLQLGVPDMFVDNPEPYLKTRSNRYGFAQLSEQANVESLQDAYINLRQ CCEEEEEEECCHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHC QTPWPDSGFSDNYYHPWLISGVELNPNGRDILQRQAWILLLLLVGFGFIIFSGIVSAYTQ CCCCCCCCCCCCCCCCEEEECEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGITRSAEMSLKLALGGCRRGLMGQLLRENIPALVLVGGLSPLLGLIVTHYVGTIGVYQE HCCCCCHHCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH YFVEGVKFNFWLWLVAVSCSLWLFICCALFPLSGSINKLFSRGKQGHMTKMQQGVRQLVL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH VLQLAVITGVLLVSLSLMYQELQKYSSVVIAKDVTSYKPKVDGRLSVMLTSEQLDGEWRV HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEE DGSPIALSSAPFTQLGAPSLKYQSESGVALEKPINGLYVSHNFFRLLGIPLLSRGDLAEN CCCCEEECCCCCHHCCCCCCCCCCCCCCEEECCCCCEEECCHHHHHHCCCCCCCCCCCCC TVMINRSMASQLAIELGLNDWRAVKGLALKVSGFYYEKHVRVAGIVSDTAHFGIANEAKP EEEEEHHHHHHHHHHHCCCHHHHHCCEEEEEECEEEECCEEEEEEEECHHHCCCCCCCCC LIYLSLKDQNPLLSSRIAPVFYSKGGNKEVIASHLNDWALLLSPKLSYVKGQSVVKQIED EEEEEECCCCCCHHHCCCCEEECCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHC TDTAGKLLFLTSSSMALLIIFLVIFTLYNKFSYAVKSEQMKWAIMLAVGGKKEALMAQMV CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHH WANALLAMVSILLTLGVFILLESYTQSLVNVSLFQPLIWAVCIALTLLFIVVITLWAARG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKQNISVLLRG HHHCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA