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The map label for this gene is rhtB [H]

Identifier: 157963968

GI number: 157963968

Start: 5048487

End: 5049113

Strand: Direct

Name: rhtB [H]

Synonym: Spea_4157

Alternate gene names: 157963968

Gene position: 5048487-5049113 (Clockwise)

Preceding gene: 157963967

Following gene: 157963970

Centisome position: 97.56

GC content: 50.08

Gene sequence:

>627_bases
ATGAGCTTCGATACCTGGTTACTCTACCTATTCGCCATCCTATTGATTGCAGTGTCTCCCGGCACTATGGCTGTACTGTC
TATGGGCCACGGTATTCACTACGGTAAGAGCCGCAGCATTGCGACGGCATTCGGTAGTGTAAGCTCGGCGCTGATCCTTA
TGATGGCCTCAGCTGCAGGCCTAGGTGCTTTGCTAAGTGCCACCGAGTATGGCTTTACTGTATTAAAGTGGTGTGGCGCA
GCTTACCTGCTGTTTCTTGGCATTAAGTTATTGCTTACTAGAGGTGATGGCAAAGGGCTGGAACTCAAAACCACCCAAGG
TAAAGGCACACCAAAACAGCTATTCAAGCAGGCCTTTCTGGTCGGCATTAGTAATCCTAAAGATCTACTGTTTTTCGCCG
CTCTATTCCCTCAGTTTATTGATATCAGTGCACCGCAAGGGCCGCAGCTTGCTATCCTCGCCACAACTTGGGCCGTGGTC
GATTTTAGCTTCGTGATGATCTACGCCAGCATGGCCAATGTGCTTGCGCCAACATTGAAGTCGAGCAATAGACTGCATTG
GTTCGATAGAACCAGCGGTGGGGTATTTGTGGCTCTGGCAGCGATTTTAGTCAGCCGCGAAAACTAG

Upstream 100 bases:

>100_bases
CGTCACCCAAAGGTCATTCCAGACTACATTCCTTAGCATATTGCCTAAATAATATCTGGCAGCTATAGTGCTGCCAGATA
TTCCAAATTGTATAAAATTT

Downstream 100 bases:

>100_bases
TTTATCTGTAAGCCACAAAACAAAAAGCCAAGTTTAATACTAAAATACTCATTAGTTTTAACTTGGCTTTTTAGTGCGAG
CTTAACGCACTAATGCTTTA

Product: lysine exporter protein LysE/YggA

Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSFDTWLLYLFAILLIAVSPGTMAVLSMGHGIHYGKSRSIATAFGSVSSALILMMASAAGLGALLSATEYGFTVLKWCGA
AYLLFLGIKLLLTRGDGKGLELKTTQGKGTPKQLFKQAFLVGISNPKDLLFFAALFPQFIDISAPQGPQLAILATTWAVV
DFSFVMIYASMANVLAPTLKSSNRLHWFDRTSGGVFVALAAILVSREN

Sequences:

>Translated_208_residues
MSFDTWLLYLFAILLIAVSPGTMAVLSMGHGIHYGKSRSIATAFGSVSSALILMMASAAGLGALLSATEYGFTVLKWCGA
AYLLFLGIKLLLTRGDGKGLELKTTQGKGTPKQLFKQAFLVGISNPKDLLFFAALFPQFIDISAPQGPQLAILATTWAVV
DFSFVMIYASMANVLAPTLKSSNRLHWFDRTSGGVFVALAAILVSREN
>Mature_207_residues
SFDTWLLYLFAILLIAVSPGTMAVLSMGHGIHYGKSRSIATAFGSVSSALILMMASAAGLGALLSATEYGFTVLKWCGAA
YLLFLGIKLLLTRGDGKGLELKTTQGKGTPKQLFKQAFLVGISNPKDLLFFAALFPQFIDISAPQGPQLAILATTWAVVD
FSFVMIYASMANVLAPTLKSSNRLHWFDRTSGGVFVALAAILVSREN

Specific function: Conducts the efflux of homoserine and homoserine lactone [H]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI48994979, Length=208, Percent_Identity=32.6923076923077, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1788099, Length=160, Percent_Identity=31.875, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22248; Mature: 22116

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDTWLLYLFAILLIAVSPGTMAVLSMGHGIHYGKSRSIATAFGSVSSALILMMASAAG
CCHHHHHHHHHHHHHHHCCCCHHEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LGALLSATEYGFTVLKWCGAAYLLFLGIKLLLTRGDGKGLELKTTQGKGTPKQLFKQAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCHHHHHHHHHH
VGISNPKDLLFFAALFPQFIDISAPQGPQLAILATTWAVVDFSFVMIYASMANVLAPTLK
HCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
SSNRLHWFDRTSGGVFVALAAILVSREN
CCCCEEEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFDTWLLYLFAILLIAVSPGTMAVLSMGHGIHYGKSRSIATAFGSVSSALILMMASAAG
CHHHHHHHHHHHHHHHCCCCHHEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LGALLSATEYGFTVLKWCGAAYLLFLGIKLLLTRGDGKGLELKTTQGKGTPKQLFKQAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCHHHHHHHHHH
VGISNPKDLLFFAALFPQFIDISAPQGPQLAILATTWAVVDFSFVMIYASMANVLAPTLK
HCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
SSNRLHWFDRTSGGVFVALAAILVSREN
CCCCEEEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]