| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963964
Identifier: 157963964
GI number: 157963964
Start: 5044575
End: 5046227
Strand: Direct
Name: 157963964
Synonym: Spea_4153
Alternate gene names: NA
Gene position: 5044575-5046227 (Clockwise)
Preceding gene: 157963959
Following gene: 157963965
Centisome position: 97.49
GC content: 48.7
Gene sequence:
>1653_bases ATGCTGTATCTATTAGCTAGCTGCATCGCACTATTATTAGGCCCACTGTTTTATCGATTCTTTTCGACAGGCAATGGACT ACAAAAAGGCCTAGACGGATTTATATTCGTTTCTCTGGGCGGTTTAGTGCTGGTTCATATTCTTCCAGAGCTATTAGAGC ATGGCGGGTTTCTAGCGATTGTGTTTGTGATAATCGGTATATGGGGCCCCACCCTTAGCGAACGACTTTTCCACCGCTAT TCAGAAGTCACCCATAACCTCACCTTAATCTTAGGTATTGGCGGACTATTACTGCATACCATCACAGATGGTGGCGCGAT GATTTTGGCTCAACAAGAAGGTAACTCCCCCTTGTTGGCGCTGGGGATCATCTTGCATAGGCTGCCTGTCGGTGTAGCCA TCTGGTGGTTACTCAAGCCACAAGTCGGCAGTCGCTGGGCTATGGTGGTACTCGCCGCAATGATGCTACTCACCGGCTTC GGTTACTTTGCCGGAGAGCAAATGCTGTCTCACTTAAGCCTTGAGAATACCGTTTATTTACAAGCTTTTGTTACGGGCTC CATCCTGCATGTAGTGCTACATCAGCCCCATGGCAACCCAGTAACTGACAAGCAAGGCAAGTATGAATACCACGCTGGGA TAGGTAGTTTACTCGGTATCGCTCTACTATTTTTACTGCTGATGATGGATTCAGGCGGTCATGACCATCATCACAGCCAT AGTCACTCAACCGAGCACCTACTCGATTGGATGCTGACTATCGCGCCAGTTTTACTCCTCAGTTATGCCGTAGCGAGTCT GCGTTTCCACTTTGGACTCACGCCTCACAACGACCAGCTGAGCAAGCTTTGGCTGCAAAGATTACTCGGCCCAGAAGCTA TCATCATTACCGGCTTACTACTTGGCCCGATGTTTGCGCTGATCCAAGCGGTCTCGGTGGCGATAATTGGCTGGCAGCTC ACTCGCTGTAATGTCGAACCTACCGACCCCCATGATGCTCTGCCTGATTCGGCTTGGCGTTTTGGTTTCGCACACTTGGT CGATCGTAGTGCGCCATGGATCTTGTTGAGCCTAGTACTAGCAAATCTCATCGGTCACCCAGCCGTACCACTATCTAGCC CGTTAGTGCAGGTGTTAGTGCTGTTATTGGTATTTTTACCGATGCGATTCTGTAATTTAGGTGCCGCAGTGTTGTCTTTA TCTCTGGCATACAGTGGCTGGACAACGACGGCCGTGCTCTTGCCATTAATCGCCGCACCAATATTTAATATTGCCCAGTT AAAACTGATGAATTGGACTCAAAGAATCAGCTTATTTGCACTTCTGATAGCATTGCTTGGGGCTATTGAGTTATTGCATC CTAAGTGGCAGGCCTTAGTGCACCTGCCTGCGACACTTAACAATATCTGTTTGATCATTGTGGCCATCTTGTTTGCCACC AGCTTGTTACGCCTTGGACCACGCAAGTTCCTAAGCCGACTCATGCTGCTTAAGCCGAAGGCTCATCACCACGATCACAG CCACTCGCACAGCCATGAGCCTAAGCATGAATATGAGCATAGCCATGCTCCTAAGCACGAGCATAGCCATGAGCACGGTC ATAAGCCTAAGCATGAACACCAGCATAGTCATGATCACAAGCATCATCATTAA
Upstream 100 bases:
>100_bases TTGAATATCAATGTAAATTCAATATAGGCCTCTGCTAATTATCCACAAGGCTGGTATACTATGGCGCTTTTCTCGCTCTC GCGGTTTAAATTGGAACTCA
Downstream 100 bases:
>100_bases TAGTCGCAGTCTCTAGTCAGCTGCCGCTAGCTTTTCTAAGTCATGGGCATTAACCTGTATCCATGACTTAGATTTGAGCT ATGTTTATGTGCATTCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MLYLLASCIALLLGPLFYRFFSTGNGLQKGLDGFIFVSLGGLVLVHILPELLEHGGFLAIVFVIIGIWGPTLSERLFHRY SEVTHNLTLILGIGGLLLHTITDGGAMILAQQEGNSPLLALGIILHRLPVGVAIWWLLKPQVGSRWAMVVLAAMMLLTGF GYFAGEQMLSHLSLENTVYLQAFVTGSILHVVLHQPHGNPVTDKQGKYEYHAGIGSLLGIALLFLLLMMDSGGHDHHHSH SHSTEHLLDWMLTIAPVLLLSYAVASLRFHFGLTPHNDQLSKLWLQRLLGPEAIIITGLLLGPMFALIQAVSVAIIGWQL TRCNVEPTDPHDALPDSAWRFGFAHLVDRSAPWILLSLVLANLIGHPAVPLSSPLVQVLVLLLVFLPMRFCNLGAAVLSL SLAYSGWTTTAVLLPLIAAPIFNIAQLKLMNWTQRISLFALLIALLGAIELLHPKWQALVHLPATLNNICLIIVAILFAT SLLRLGPRKFLSRLMLLKPKAHHHDHSHSHSHEPKHEYEHSHAPKHEHSHEHGHKPKHEHQHSHDHKHHH
Sequences:
>Translated_550_residues MLYLLASCIALLLGPLFYRFFSTGNGLQKGLDGFIFVSLGGLVLVHILPELLEHGGFLAIVFVIIGIWGPTLSERLFHRY SEVTHNLTLILGIGGLLLHTITDGGAMILAQQEGNSPLLALGIILHRLPVGVAIWWLLKPQVGSRWAMVVLAAMMLLTGF GYFAGEQMLSHLSLENTVYLQAFVTGSILHVVLHQPHGNPVTDKQGKYEYHAGIGSLLGIALLFLLLMMDSGGHDHHHSH SHSTEHLLDWMLTIAPVLLLSYAVASLRFHFGLTPHNDQLSKLWLQRLLGPEAIIITGLLLGPMFALIQAVSVAIIGWQL TRCNVEPTDPHDALPDSAWRFGFAHLVDRSAPWILLSLVLANLIGHPAVPLSSPLVQVLVLLLVFLPMRFCNLGAAVLSL SLAYSGWTTTAVLLPLIAAPIFNIAQLKLMNWTQRISLFALLIALLGAIELLHPKWQALVHLPATLNNICLIIVAILFAT SLLRLGPRKFLSRLMLLKPKAHHHDHSHSHSHEPKHEYEHSHAPKHEHSHEHGHKPKHEHQHSHDHKHHH >Mature_550_residues MLYLLASCIALLLGPLFYRFFSTGNGLQKGLDGFIFVSLGGLVLVHILPELLEHGGFLAIVFVIIGIWGPTLSERLFHRY SEVTHNLTLILGIGGLLLHTITDGGAMILAQQEGNSPLLALGIILHRLPVGVAIWWLLKPQVGSRWAMVVLAAMMLLTGF GYFAGEQMLSHLSLENTVYLQAFVTGSILHVVLHQPHGNPVTDKQGKYEYHAGIGSLLGIALLFLLLMMDSGGHDHHHSH SHSTEHLLDWMLTIAPVLLLSYAVASLRFHFGLTPHNDQLSKLWLQRLLGPEAIIITGLLLGPMFALIQAVSVAIIGWQL TRCNVEPTDPHDALPDSAWRFGFAHLVDRSAPWILLSLVLANLIGHPAVPLSSPLVQVLVLLLVFLPMRFCNLGAAVLSL SLAYSGWTTTAVLLPLIAAPIFNIAQLKLMNWTQRISLFALLIALLGAIELLHPKWQALVHLPATLNNICLIIVAILFAT SLLRLGPRKFLSRLMLLKPKAHHHDHSHSHSHEPKHEYEHSHAPKHEHSHEHGHKPKHEHQHSHDHKHHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60871; Mature: 60871
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLLASCIALLLGPLFYRFFSTGNGLQKGLDGFIFVSLGGLVLVHILPELLEHGGFLAI CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHH VFVIIGIWGPTLSERLFHRYSEVTHNLTLILGIGGLLLHTITDGGAMILAQQEGNSPLLA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH LGIILHRLPVGVAIWWLLKPQVGSRWAMVVLAAMMLLTGFGYFAGEQMLSHLSLENTVYL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE QAFVTGSILHVVLHQPHGNPVTDKQGKYEYHAGIGSLLGIALLFLLLMMDSGGHDHHHSH HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SHSTEHLLDWMLTIAPVLLLSYAVASLRFHFGLTPHNDQLSKLWLQRLLGPEAIIITGLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH LGPMFALIQAVSVAIIGWQLTRCNVEPTDPHDALPDSAWRFGFAHLVDRSAPWILLSLVL HHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH ANLIGHPAVPLSSPLVQVLVLLLVFLPMRFCNLGAAVLSLSLAYSGWTTTAVLLPLIAAP HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH IFNIAQLKLMNWTQRISLFALLIALLGAIELLHPKWQALVHLPATLNNICLIIVAILFAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCHHHHHHHHHHHHHHHHH SLLRLGPRKFLSRLMLLKPKAHHHDHSHSHSHEPKHEYEHSHAPKHEHSHEHGHKPKHEH HHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHH QHSHDHKHHH CCCCCCCCCC >Mature Secondary Structure MLYLLASCIALLLGPLFYRFFSTGNGLQKGLDGFIFVSLGGLVLVHILPELLEHGGFLAI CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHH VFVIIGIWGPTLSERLFHRYSEVTHNLTLILGIGGLLLHTITDGGAMILAQQEGNSPLLA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH LGIILHRLPVGVAIWWLLKPQVGSRWAMVVLAAMMLLTGFGYFAGEQMLSHLSLENTVYL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE QAFVTGSILHVVLHQPHGNPVTDKQGKYEYHAGIGSLLGIALLFLLLMMDSGGHDHHHSH HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SHSTEHLLDWMLTIAPVLLLSYAVASLRFHFGLTPHNDQLSKLWLQRLLGPEAIIITGLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH LGPMFALIQAVSVAIIGWQLTRCNVEPTDPHDALPDSAWRFGFAHLVDRSAPWILLSLVL HHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH ANLIGHPAVPLSSPLVQVLVLLLVFLPMRFCNLGAAVLSLSLAYSGWTTTAVLLPLIAAP HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH IFNIAQLKLMNWTQRISLFALLIALLGAIELLHPKWQALVHLPATLNNICLIIVAILFAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCHHHHHHHHHHHHHHHHH SLLRLGPRKFLSRLMLLKPKAHHHDHSHSHSHEPKHEYEHSHAPKHEHSHEHGHKPKHEH HHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHH QHSHDHKHHH CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA